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8 protocols using brefeldin a

1

Modulating Immune Responses in Nile Tilapia

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STAT1 inhibitor Fludarabine, STAT5 inhibitor Ac-4-130, mTORC1 inhibitor rapamycin and Brefeldin A were purchased from MedChemExpress. Nile tilapia was i.p. injected with 5 mg/kg Fludarabine or 1 mg/kg rapamycin every two days during E. piscicida infection. Nile tilapia was i.p. injected with 13 mg/kg Brefeldin A to block cytokine secreting at 6 h before sacrifice, and the spleen leukocytes were isolated for IFN-γ producing by flow cytometry or western blot on day 5 or 8 post infection. For the STAT5 inhibition, the isolated spleen leukocytes were treated with 5 mM Ac-4-130, and the cell were stimulated with or without recombinant IL-2 for 12 h.
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2

Exploring Cellular Responses to Brefeldin A, Tunicamycin, and Midiv-1

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Human lung adenocarcinoma A549 cells and breast cancer cell MCF7 were obtained from Genechem (Shanghai, Genechem Co. Shanghai, China). Human hepatoma cell line MHCC-97H were obtained from Botian (Xi’an, China). A549 cells were cultured in F12K (Hyclone) with 10% fetal bovine serum (FBS, Biological Industries, Israel). MCF7 and MHCC-97H cells were cultured in DMEM medium (Hyclone) with 10% fetal bovine serum (Biological Industries, Israel). Brefeldin A treatment: Cells were treated with BFA (MedChemExpress, Shanghai, China) dissolved in DMSO for 12 hr at various doses. Tunicamycin treatment: Cells were treated with Tunicamycin (MedChemExpress, Shanghai, China) dissolved in DMSO for 12 hr at various doses. Midiv-1 treatment: Cells were treated with Midiv-1 (MedChemExpress, Shanghai, China) dissolved in DMSO for 12 hr at various doses.
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3

Macrocycle Compound Acquisition Protocol

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All of the macrocycle compounds
are commercially available. Brefeldin
A was purchased from MedChemExpress, romidepsin and troleandomycin
from Focus Biomolecules, simeprevir and paritaprevir from Invivochem,
and pacritinib from Sigma-Aldrich.
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4

Stimulating Splenic B Cells to Detect Cytokines and Induce Tregs

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Mouse splenic CD19+ B cells (1.5x106/ml) were cultured in medium (RPMI 1640 glutamax; Thermo Fisher Scientific) containing 10% heat-inactivated fetal bovine serum (FBS; Gibco, Gaithersburg, MD, USA) and 100 μg/mL penicillin/streptomycin (Invitrogen, Carlsbad, CA, USA) and restimulated for 2 days with SEA (20 μg/ml) to allow the detection of cytokines, as previously established for in vivo schistosome-exposed B cells [36 (link)]. Supernatants were collected for cytokine analysis by ELISA. Cells were cultured for an additional 4 hours with Brefeldin A (10 μg/ml; MedChemExpress) to detect intracellular IL-10 by flow cytometry. For in vitro Treg cell induction, SEA-stimulated CD19+ B cells were co-cultured with MACS-sorted CD4+CD25- T cells at a 1:1 ratio (1 x 106/ml each). After 4 days, the frequencies of Treg cells were determined by flow cytometry by gating on Foxp3+CD25+ cells in the CD3+CD4+ T cell population, and culture supernatants were collected for subsequent cytokine determination.
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5

Tc Degranulation Assay Protocol

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The ability of Tc to degranulate was tested with the degranulation assay.30 (link) A total of 100,000 IFNγ-treated tumor cells and 200,000 pTc or TiTc were seeded in Tc medium containing FITC anti-human CD107a (Biolegend) per well of a 96-well plate precoated with anti-human CD28 (Immunotools). After 1 hour of incubation, 1 µg/mL Brefeldin A (MedChemExpress, Monmouth Junction, USA) was added, followed by another 4 hours incubation. Flow cytometry staining was performed using the Inside Stain Kit (Miltenyi Biotec), APC anti-human CD8 (Immunotools) and PE anti-human IFNγ (Biolegend). Measurements were performed at a BD FACSCalibur and gates were adjusted to detect CD8+/CD107a+/IFNγ+ cells. Percentage of triple-positive Tc was normalized to the triple-positive population of Tc not incubated with tumor cells.
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6

Macrocycle Compounds Acquisition Protocol

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All the macrocycle compounds are commercially available. Brefeldin A was purchased from MedChemExpress, romidepsin and troleandomycin from Focus Biomolecules, simeprevir and paritaprevir from Invivochem, and pacritinib from Sigma Aldrich.
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7

Molecular Mechanisms of β-elemene Anticancer Effects

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β-elemene (#63965) was purchased from Sigma-Aldrich. Gefitinib (#HY-50895), Rapamycin (#HY-10219), Brefeldin A (#HY-16592), 3-Methyladenine (#HY-19312), and Chloroquine (#HY-17589) were obtained from MedChemExpress. The Cell Counting Kit-8 (#MA0218), Phartmingen annexin V-FITC Apoptosis Detection Kit I (#556547), and Lyso-Tracker Red (#C1046) stain were obtained from Meilunbio, BD Biosciences, and Beyotime, respectively. The PrimeScript RT reagent kit (#RR037A) was purchased from Takara. The antibody against GAPDH (#5174), β-actin (#4970), LC3B (#3868), and SQSTM1 (#16177) were obtained from Cell Signaling Technology. The plasmids for overexpression of ATG5 (#RC210563) and ATG7 (#RC226545) were obtained from ORIGENE. EpiQuik m6A RNA Methylation Quantification kit (#710394) was purchased from EPIGENTEK.
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8

Porcine Fetal Fibroblast Culture and CRISPR Optimization

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The porcine fetal fibroblasts (PFFs) used in this study were obtained from Large White pigs at the Northeast Agricultural University Embryo Engineering Laboratory Experimental Pig Base. All animal-related procedures followed the guidelines set forth by the Institutional Animal Care and Use Committees (IACUCs) of Northeast Agriculture University. The PFF culture method has been previously published [23 (link)]. Briefly, PFFs were isolated from a 33-day-old foetus and cultured in Dulbecco’s modified Eagle medium (DMEM, Gibco, New York, NY, USA) supplemented with 15% foetal bovine serum (FBS, HyClone, New York, NY, USA), 1% penicillin–streptomycin (Gibco, New York, NY, USA), 1% nonessential amino acids (Gibco, New York, NY, USA), and 2 mmol/L L-glutamine (Sigma, New York, NY, USA). The cells were passaged every two days using 0.25% trypsin-EDTA (Gibco, New York, NY, USA). The small molecules L-189 (CAS No. HY-15588), NU7441 (CAS No. HY-11006), SCR7 (CAS No. HY-12742), L755507 (CAS No. HY-19334), RS-1 (CAS No. HY-19793), and Brefeldin A (CAS No. HY-16592) were sourced from Med Chem Express Company (Monmouth Junction, NJ, USA). The small molecules were added in cell culture medium after CRISPR RNP electroporation at different concentrations.
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