The largest database of trusted experimental protocols

8 protocols using ab23673

1

Western Blot Analysis of PPARδ

Check if the same lab product or an alternative is used in the 5 most similar protocols
Retinas were harvested and lysed in NE-PER nuclear and cytoplasmic extraction reagents kit (Pierce, 78,833). Amounts of protein were measured using a BCA assay (Pierce, 23,225). Protein was electrophoresed on a 4–20% gradient SDS polyacrylamide gel (Invitrogen) and subsequently transferred to a nitrocellulose membrane (BioRad). Membranes were then incubated in blocking buffer (LI-COR, 927–40100) for 1 h at room temperature. This was followed by incubation with primary antibodies at 4 °C overnight. Primary antibodies used were anti-PPARδ (1:2,000, Abcam, ab23673) and β-actin (1:5,000, Abcam, ab6276, mouse monoclonal) diluted in blocking buffer. Blots were then washed and incubated in secondary antibody (1:5,000, IRDye, LI-COR) for 1 h at room temperature. Blots were then washed, imaged, and the bands quantified using the Odyssey CLx (LI-COR) machine. The values were normalized to β-actin and then normalized to the cytosolic vehicle-treated control.
+ Open protocol
+ Expand
2

Protein Phosphorylation Analysis in BMDCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
To analyse protein phosphorylation, 3–5 million BMDCs or 2 million pMacs were stimulated with LPS or poly I:C as indicated and cells lysed in lysis buffer (150 mM NaCl, 50 mM TrisHCl pH8.0, 0.1% SDS, 0.5% Sodium Deoxycholate, 1% Triton) supplemented with protease (cOmplete, Sigma) and phosphatase (PhosSTOP, Sigma) inhibitors. Samples were resolved by SDS-PAGE and proteins transferred to PVDF membranes. The following antibodies were used for western blot (all from Cell Signalling unless specified otherwise): β-actin (1:3000, 8H10D10), ERK (1:1000, L34F12), p-ERK (1:1000, 9101), p38 (1:1000, D13E1), p-p38 (1:1000, 28B10), p65 (1:1000, D14E12), p-p65 (1:1000, 93H1), CD36 (1:1000, PA5-33291, ThermoFisher), anti-mouse IgG (1:3000, Poly4053, Biolegend), anti-rabbit IgG (1:3000, sc-2955, Santa Cruz Biotechnology), PPARδ (1:500, ab23673, Abcam). Membranes were imaged in an Amersham Imager 600 and band intensity quantified with Fiji (ImageJ).
+ Open protocol
+ Expand
3

Automated Western Blotting of Nuclear Receptors

Check if the same lab product or an alternative is used in the 5 most similar protocols
The sample protein was extracted from liver tissues after the cells were lysed by RIPA buffer (89901, Thermo Scientific) at 4°C for 20 minutes and centrifuged for 10 minutes (4°C, 11180.0g). The secondary antibodies were anti‐PPARγ (ab209350, Abcam), anti‐PPARα (ab24509, Abcam), anti‐FXR (NBP2‐16550, Novus), anti‐RARα (ab254098, OriGene) and anti‐PPARδ (ab23673, Abcam). The protein was quantified completely by automatic Western blotting through a Wes automated system (ProteinSimple). The dynamic linear range of the standard protein was diluted in a gradient from 0.125 to 4 mg/mL. The Western blotting process was conducted according to the instructions for the Wes system, which differs from the traditional method. The machine was run with default parameters, and imaging and analysis were performed using Compass software (ProteinSimple).
+ Open protocol
+ Expand
4

Gomisin N Regulation of Adipogenesis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Gomisin N (≥98% purity, C23H28O6, GN) was purchased from YuanYe Biotechnology (Shanghai, China). Dulbecco’s modified Eagle’s medium (DMEM), bovine calf serum (BCS), fetal bovine serum (FBS), penicillin–streptomycin (P/S), recombinant human BMP4, trypsin and ethylenediaminetetraacetic acid (EDTA) were purchased from Gibco (Gaithersburg, MD, USA). Dexamethasone (DEX), 3-isobutyl-1-methylxanthine (IBMX), insulin, Oil Red O (ORO), dimethyl sulfoxide (DMSO), phosphatase inhibitor cocktails I and II, AICAR and CC were purchased from Sigma-Aldrich (St. Louis, MO, USA). Phosphate-buffered saline (PBS) was purchased from iNtRON Biotechnology (Gyeonggi, South Korea). Antibodies against C/EBPα (sc-61), FAS (sc-20140), SREBP1c (sc-366), LPAATθ (sc-514164), DGAT1 (sc-32861), Lipin1 (sc-98450), PPARα (sc9000), PPARγ (sc7196), PGC1α (sc13067), CPT1 (sc393070), UCP1 (sc6529) and GAPDH (sc365062) were purchased from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA, USA). Antibodies against p-ACC (cs3661, Ser79) p-AMPK (cs2535, Thr172), AMPK (cs2603), p-HSL(cs4139) and ACC (cs3662) were purchased from Cell Signaling Technologies (Danvers, MA, USA). Antibodies against PPARδ (ab23673), PRDM16 (ab202344), UCP1 (ab23841), FGF21 (ab64857) and CPT1 (ab1285568) were purchased from Abcam (Cambridge, UK).
+ Open protocol
+ Expand
5

Protein Expression Analysis in Astrocytes and Spinal Cord

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total protein was extracted from the ALT astrocytes and spinal cord tissues using a lysis buffer (20 mM Tris-HCl, 0.1% sodium dodecyl sulfate (SDS), 0.8% NaCl, and 1% Triton X-100). The protein was subjected to gradient electrophoresis on a 12% gel. The resolved proteins were electroblotted onto a nitrocellulose membrane. The membrane was incubated with a blocking reagent. Next, the membrane was incubated with the following primary antibodies at 4°C for 12 h: anti-IκB alpha (E130) (1 : 2000; ab32518; Abcam, Cambridge, MA, USA), anti-PPAR-β (1 : 2000; ab23673; Abcam), anti-GFAP (1 : 2000; ab7260; Abcam), anti-β-actin (1 : 4000; ab8227; Abcam), and anti-CISD2 (1 : 500; PA5-34545; Thermo Fisher Scientific). The membrane was washed and incubated with goat anti-rabbit IgG (horseradish peroxidase- (HRP-) conjugated secondary antibody) (1 : 5000; 12-348; Merck Millipore) for 1 h. Protein bands were developed using the Immobilon™ Western Chemiluminescent HRP Substrate (WBKLS0500; Merck Millipore). Densitometric analysis of the protein bands was performed using ImageQuant™ LAS 4000 (GE Healthcare Life Sciences).
+ Open protocol
+ Expand
6

Protein Expression Analysis of Liver Fibrosis

Check if the same lab product or an alternative is used in the 5 most similar protocols
HSCs were co-cultured with either SFM, hBM-MSCs, or hBM-MSCs-Ex (5 ng/ml) for 48 h before samples were collected for protein extraction. Liver tissue was collected from each treatment group (liver fibrosis, hBM-MSCs, and hBM-MSCs-Ex group) for protein extraction. Protein samples were mixed with SDS sample buffer and heated to 95 °C for 10 min, followed by separation on SDS-polyacrylamide gels. Resolved proteins were electro-blotted onto nitrocellulose membrane and probed with antibodies against PPARγ (ab 23673), Wnt3a (ab 248472), Wnt10b (ab70816), β-catenin (ab32572), WISP1 (ab50041), Cyclin D1 (ab16663), α-SMA (ab5694), Collagen I (ab138492), and GAPDH (ab 8245) overnight at 4 °C (1:1000 dilution, Abcam, Cambridge, UK). Nitrocellulose membranes were then incubated with a secondary antibody, HRP-conjugated goat anti-rabbit IgG (ab15007), at room temperature for 2 h, and visualized by chemiluminescent detection according to the manufacturer’s instructions (Immobilon western chemiluminescent HRP substrate, Millipore).
+ Open protocol
+ Expand
7

Western Blot Analysis of PPARD and TCF7L2

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissues and cells were lysed in RIPA buffer according to manufacturer’s instruction (Beyotime, China). Protein lysates were heated at 95°C 5min in 5 × Sodium Dodecyl Sulfate (SDS) sample buffer separated by 12% SDS-PAGE (20 μg each lane), then transferred to polyvinylidene fluoride (PVDF) membranes (Millipore, USA) using Mini Trans-Blot Cell (Bio-Rad, USA). After being blocked with 5% non-fat milk for 1.5 h, the membranes were incubated with primary antibodies overnight at 4°C. After washed three times, the membranes were hybridized with secondary antibody for 1 h at 37°C, and washed three times. The targeted proteins were detected using the ImageQuant LAS 4000 mini (GE, USA) according to the manufacturer instructions. Primary antibodies were specific for PPARD (Abcam, USA, ab23673; 1:1000 dilution), TCF7L2 (Abcam, USA, ab32873; 1:1000 dilution), and β-actin (Boster, China, BM0627; 1:1000 dilution). Secondary antibodies were goat anti-mouse IgG-HRP (Santa Cruz, USA, sc-2005; 1:3000 dilution) and goat anti-rabbit IgG-HRP (Santa Cruz, USA, sc-2004; 1:3000 dilution).
+ Open protocol
+ Expand
8

Enzyme-linked Immunoassays for Gut Hormones

Check if the same lab product or an alternative is used in the 5 most similar protocols
Enzyme-linked immunosorbent assay (ELISA) kits for ghrelin (CSB-E13167r), CCK (CSB-E08114r), and GLP-1 (CSB-E08117r) were purchased from Cusabio, China. A glucose estimation kit was purchased from AutoSpan diagnostics Ltd, India. Anti-ghrelin (ab15861), anti-ghrelin receptor (ab85104), anti-CCKAR (ab75153), anti-PPARα (ab2779), anti-PPARδ (ab23673) primary antibodies, and anti-rabbit/mouse horseradish peroxidase (HRP) conjugated secondary antibodies (ab97051, ab97023) were purchased from Abcam, Inc. First strand cDNA synthesis kit and other PCR reagents were purchased from Fermentas, USA. Primers were synthesised by Eurofins Genomics, India. β-actin primary antibody (A1978), Trizol, Bicinchoninic acid, and all other chemicals were purchased from Sigma Aldrich Co, LLC.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!