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5 protocols using kta go

1

Recombinant Protein Purification from E. coli

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12His‐SCOTIN (PRD) or 12His‐SCOTIN (PRDΔ150‐177) was overexpressed in E. coli BL21(DE3) using the pET28a vector. Bacterial cells were grown in Terrific Broth (TB) with vigorous shaking (200 rpm) at 37°C for 8 h and then incubated at 17°C for 36 h for protein expression. Bacterial pellets were resuspended in lysis buffer (50 mM Tris–HCl, 500 mM NaCl, 10% glycerol, and protease inhibitor cocktail; pH 7.9) and lysed by sonication. The lysate pellets were obtained by centrifugation at 12,000 g and 4°C for 30 min. Using a magnetic stirrer at RT for 2 h, the lysate pellets were dissolved in binding buffer (8 M urea, 50 mM Tris–HCl, 500 mM NaCl, 10% glycerol, and 25 mM imidazole; pH 7.9). Cell debris was removed as pellets by centrifuging lysate pellets in binding buffer at 12,000 g and 4°C for 30 min, and the supernatant was purified with a HisTrap™ HP column (Cytiva). The eluted proteins were further purified by gel filtration (HiLoad® 16/600 Superdex® 200 pg) using FPLC (ÄKTA go, Cytiva). The proteins were dialyzed with storage buffer (20 mM sodium acetate, 150 mM NaCl; pH 5) using desalting columns (PD‐10, Cytiva). Then, the proteins were concentrated to the concentration required for the experiment with Vivaspin® concentrators (Sartorius) and stored at −80°C.
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2

Recombinant Human ACE2 Extracellular Domain Production

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The extracellular domain of ACE2 receptor (GenBank NM_021804.3) was produced in pCSE2.6-hFc expression vector in Expi293F cells (Thermo Fisher Scientific) as described before [22 (link)]. In brief, Expi293F cells were cultivated at 37°C, 110 rpm, and 5% CO2 in Gibco FreeStyle F17 expression media (Thermo Fisher Scientific) supplemented with 8 mM Glutamine and 0.1% Pluronic F68 (PAN Biotech). For transfection, 1 μg DNA and 5 μg of 40 kDa PEI (Polysciences) per mL transfection volume were diluted separately in 5 transfection volumes and then mixed for the formation of complexes (20–30 min). Afterwards, PEI:DNA complexes were added to 1.5–2 × 106 cells/mL. Forty-eight hours later, the culture volume was doubled by feeding HyClone SFM4Transfx-293 media (GE Healthcare) supplemented with 8 mM Glutamine and HyClone Boost 6 supplement (GE Healthcare) with 10% of the end volume. One week after transfection, the supernatant was harvested by 15 min centrifugation at 1500 ×g. Purification was performed on a 1-mL HiTrap Fibro PrismA (Cytiva) column on Äkta go (Cytiva) according to the manufacturer’s manual.
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3

Protein Purification and Characterization

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Protein purification was performed depending on the production scale in either 24-well filter plate with 0.5 mL resin (10 mL scale) or 1 mL column on Äkta go (Cytiva), Äkta Pure (Cytiva), or Profina System (BIO-RAD). MabSelect SuRe or HiTrap Fibro PrismA (Cytiva) was used as resins for Protein A purification. For His-tag purification of Expi293F, supernatant HisTrap FF Crude column (Cytiva) and for His-tag purification of insect cell supernatant HisTrap excel column (Cytiva) was used. All purifications were performed according to the manufacturer’s manual. Indicated antigens were further purified by SEC by a 16/600 Superdex 200 kDa pg (Cytiva). All antigens, antibodies, and scFv-Fc were run on Superdex 200 Increase 10/300GL (Cytiva) on Äkta or HPLC (Techlab) on an AdvanceBio SEC 300 Å 2.7 µm, 7.8 × 300 mm (Agilent) for quality control.
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4

Protein Purification using Affinity Chromatography

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Protein purification was performed as described before (Bertoglio et al., 2021 (link)) depending on the production scale in either 24 well filter plate with 0.5 mL resin (10 mL scale) or 1 mL column on Äkta go (Cytiva), Äkta Pure (Cytiva) or Profinia System (BIO-RAD). MabSelect SuRe or HiTrap Fibro PrismA (Cytiva) was used as resin for Protein A purification. For His-tag purification of Expi293F supernatant HisTrap FF Crude column (Cytiva) and for His-tag purification of insect cell supernatant HisTrap excel column (Cytiva) was used. All purifications were performed according to the manufacturer’s manual. Indicated antigens were further purified by size exclusion chromatography by a 16/600 Superdex 200 kDa pg (Cytiva). All antigens, antibodies and scFv-Fc were run on Superdex 200 Increase 10/300GL (Cytiva) on Äkta or HPLC (Techlab) on an AdvanceBio SEC 300Å 2.7 μm, 7.8x300 mm (Agilent) for quality control.
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5

Purification of His-tag and Fc-tagged Proteins

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Proteins were purified depending on the production scale and tag. For His-tag purification, the protein was bound by nickel-loaded Sepharose (GE Healthcare), eluted with 250 mM Imidazole and dialyzed in 1 × PBS. For small scale production (10 mL) of scFv-hFc antibodies, MabSelect SuRe Protein A resin (Cytivia) was used. Buffer changing was done by Zeba Spin Desalting Columns (Thermo Fisher Scientific). For larger scale production of eqIgG6 antibodies, 0.4 mL HiTrap Fibro PrismA (Cytivia), 1 mL HiTrap Protein G HP (Cytivia) and HiPrep 26/10 Desalting (Cytivia) columns were used in the ÄKTA go (Cytivia), ÄKTA pure (Cytivia) or Profinia system (Bio-Rad). Here, eqIgG6 antibodies with a VH3 domain could be purified via the HiTrap Fibro PrismA (Cytivia) column, all other eqIgG6 antibodies were purified via the Protein G HP (Cytivia) column. All purifications were performed according to the manufacturers’ instructions.
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