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Cfx96 system cycler

Manufactured by Bio-Rad
Sourced in United States, Germany

The CFX96TM System Cycler is a real-time PCR detection system designed for quantitative PCR (qPCR) analysis. It features a 96-well format and provides precise temperature control and consistent thermal cycling for reliable results. The system is capable of detecting multiple fluorescent reporter dyes for multiplex analysis.

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4 protocols using cfx96 system cycler

1

Adiponectin-induced Osteogenic Differentiation

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Cells were kept overnight in starvation medium (α-MEM (11095-080, Gibco) containing 0.5% FBS (10270-106, Gibco) and 1% Penicillin/Streptomycin (15140-122, Gibco)). Further, 100 ng/ml Adiponectin (50636-M08H, Sino Biological Inc.) were added for indicated time periods: 0, 45 min, 1.5 and 3 h. Then, total RNA was isolated using the NucleoSpin® RNA Kit (740955.50, MACHEREY-NAGEL). RNA concentrations were measured at 260 nm using a spectrophotometer (Nanodrop2000, Thermo Scientific). cDNA was synthesized from 1.0 μg of total RNA using the InnuSCRIPT Reverse Transcriptase kit (845-RT-6000100, Analytik Jena) and performed on CFX96TM System Cycler (Bio-Rad).
The SsoAdvancedTM Universal SYBR@ Green Supermix (1723271, Bio-Rad) was used in each reaction setup. The primers employed were: Mouse AdipoR1&2 (qMmuCID0023619, qMmuCID0010157), AP (qMmuCED0003797), BSP (qMmuCID0006396), OCN (qMmuCED0041364), OPG (qMmuCID0005205), Runx-2 (qMmuCID0005205) and F-Spondin (qMmuCED0049433) all from Bio-Rad. GAPDH (qMmuCED0027497, Bio-Rad) was used as housekeeping gene. Results were analyzed using the Bio-Rad CFX Manager 3.1 software.
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2

RNA Extraction and cDNA Synthesis

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Total RNA was extracted using the NucleoSpin@ RNA Kit (740955.50, MACHEREY‐NAGEL). The quality and quantity of the eluted mRNA were measured for optical density photometrically using a spectrophotometer (Nanodrop2000, Thermo Scientific). cDNA was synthesized from 1.0 μg of total RNA using the iScriptTM cDNA Synthesis Kit (#1708891, Bio‐Rad) and performed in the CFX96TM System Cycler (Bio‐Rad).
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3

qRT-PCR Gene Expression Analysis

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The total RNA was isolated using the ReliaPrep™ RNA Miniprep System (z6011, Promega, Madison, WI, USA). RNA concentrations were measured at 260 nm using a spectrophotometer (Nanodrop2000, Thermo Scientific, Waltham, MA, USA). cDNA was synthesized from 1.0 μg of total RNA using the Verso cDNA Synthesis Kit (AB1453B, Thermo Fisher, Waltham, MA, USA) and synthesis was performed using a CFX96TM System Cycler (Bio-Rad, Hercules, CA, USA).
The SsoAdvancedTM Universal SYBR@ Green Supermix (1723271, Bio-Rad, Hercules, CA, USA) was used in each reaction setup. The primers employed were mouse inducible nitric oxide synthases (Nos2) (QT01547980, Qiagen, Venlo, Limburg, The Netherland), interleukin 1β (Il1b) (QT01048355, Qiagen), Arginase 1 (Arg1) (QT00134288, Qiagen), interleukin 10 (Il10) (QT00106169, Qiagen), Saa3 (QT00249823, Qiagen), and ApoE (QT01043889, Qiagen). β-Actin (QT00095242, Qiagen) was used as a housekeeping gene. Results were analyzed using Bio-Rad CFX Manager 3.1 software.
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4

Laser-Stimulated Gene Expression Analysis

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Cells were kept overnight in starvation medium. Different pulse duration parameters of Er: YAG laser were used to stimulate cells. Total RNA was isolated using the NucleoSpin @ RNA Kit (740955.50, MACHEREY-NAGEL, Düren, Germany) according to the manufacturer's recommended protocol. RNA concentrations were measured using a spectrophotometer (Nanodrop2000, Ther-moFisher Scientific, Germany). cDNA was synthesized using the InnuSCRIPT Reverse Transcriptase kit (845-RT-6000100, Analytik Jena, Jena, Germany) and performed on CFX96 T M System Cycler (Bio-Rad, Feldkirchen, Germany).
The SsoAdvanced T M Universal SYBR @ Green Supermix (1723271, Bio-Rad) was used in each reaction setup. The primers employed were Mouse Lumican (qM-muCED0048548) and Fibromodulin (qMmuCED0049464) from Bio-Rad. GAPDH (qMmuCED0027497, Bio-Rad) was used as housekeeping Gene. Results were analyzed using the Bio-Rad CFX96 T M Manager 3.1 software (Bio-Rad, Germany). The temperature profile of the RT-PCR reaction was 95 • C for 15 min, 40 cycles of denaturation at 94 • C for 15 s, and annealing and extension for 60 • C for 30 s.
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