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13 protocols using anti cd105

1

Radiation Effects on ESCC and HUVEC Cells

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ESCC cell lines ECA109 and TE13 were obtained from Shanghai Institute of Cell Biology (Shanghai, China) and were maintained in DMEM medium (Gibco, Life Technologies, Carlsbad, CA, USA) supplemented with 10% fetal bovine serum (Hyclone, GE Healthcare, Little Chalfont, UK), 1% penicillin/streptomycin (Invitrogen, Life Technologies). Cells were maintained in an incubator at 37 °C, in an atmosphere containing 5% CO2. HUVECs were isolated from human umbilical cord veins using a standard procedure described previously27 (link), and grown in EBM-2 medium with SingleQuots™ (Lonza, Walkersville, MD, USA) containing VEGF and other growth factors.
Cells in the IR group were subjected to a 2, 4, 6 or 8 Gy of X-ray irradiation from a medical linear accelerator (Elekta Precise) at room temperature.
anti-CD31, anti-CD105, anti-CD31, anti-CD105, anti-lectin, anti-α-SMA, anti-VEGF, anti-HIF-1α (Abcam), fluorescein (FITC)-conjugated anti-mouse IgG, and horseradish peroxidase (HRP)-conjugated anti-rabbit IgG (Jackson ImmunoResearch, West Grove, PA, USA). rh-Endo was provided by Simcere Pharmaceuticals (Nanjing, China).
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2

Immunofluorescence Analysis of Mesenchymal Markers

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Human ventricular samples were fixed in 4% paraformaldehyde (Santa Cruz) in PBS (Lonza) and processed for paraffin embedding. Paraffin-embedded sections (6 μm thick) were de-waxed in xylene and rehydrated in ascending alcohols. The immunofluorescence analysis was performed following antigen retrieval with incubation with target retrieval solution citrate pH 6/microwave (Dako). Sections were incubated at 4°C overnight with primary antibodies for the detection of mesenchymal surface markers (see Supplementary Table S2), namely, anti-CD29 (1:40; Leica), anti-CD44 (1:200; Abcam), and anti-CD105 (1:100; Abcam) diluted in 2% goat serum (Sigma–Aldrich). After washing with PBS, sections were incubated for 1 h at RT in the dark with proper secondary antibodies (see Supplementary Table S3). Nuclear staining was performed by incubating sections with Hoechst 33342 (1:1000; Life Technologies). Sections were observed by Zeiss Axio Observer.Z1, with Apotome technology, and images acquired with the software AxioVision Rel. 4.8. For each explanted heart patient, five slices and at least 10 fields for each slice were examined.
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3

Western Blot Characterization of Cells

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Total protein from brain tissue or BV2 cells was collected, and protein concentrations were determined with a BCA kit (Beyotime Institute of Biotechnology, China) following the manufacturer’s guidelines. Equal amounts of protein were separated by SDS-polyacrylamide gel electrophoresis, transferred to polyvinylidene difluoride membranes (Millipore, MA, USA), blocked with 5% skim milk, and incubated with primary antibodies (see below) either overnight at 4 °C or for 1 h at room temperature. The membranes were washed and incubated with a horseradish peroxidase-conjugated anti-rabbit IgG secondary antibody (1:500; Beyotime Institute of Biotechnology, China) and were visualized using an ECL Plus kit (Millipore). Densitometry was performed to quantify the signal intensity using ImageJ software (Version 1.45 J; National Institutes of Health, Bethesda, MD, USA). The primary antibodies were rabbit anti-Nrf2, anti-HO-1, anti-NF-κB1, anti-CD29, anti-CD90, anti-CD44, anti-CD105, anti-CD34, anti-vWF, anti-BDNF, anti-TrkB, and anti-GAPDH (Abcam, Cambridge, UK).
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4

Isolation and Characterization of ADSCs

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Human abdominal subcutaneous adipose tissues were harvested during liposuction procedures after obtaining signed informed consent in the Department of Plastic Surgery, Affiliated Hospital of Zunyi Medical University, China. ADSC isolation and culture was performed as previously described.15 Briefly, human adipose tissue was minced and digested with 0.075% collagenase type I (Sigma) for 45 minutes at 37°C. After digestion, an equal volume of Dulbecco's modified Eagle's medium (DMEM; Gibco, Carlsbad, California) supplemented with 10% fetal bovine serum (FBS; Gibco) was added and the suspension was passed through a 200 μm mesh filter followed by centrifugation at 800g for 5 minutes). The stromal‐vascular fraction cell pellets were resuspended and cultured at 37°C in 5% CO2 in DMEM supplemented with 10% FBS and 1% penicillin‐streptomycin (Gibco). ADSCs were subcultured at 80% confluence, and passage‐3 cells were used in the study procedures. ADSCs surface marker expression was assayed by flow cytometry. Suspensions of 1 × 106 ADSCs were incubated with anti‐CD90, anti‐CD73, anti‐ CD105, anti‐CD34, anti‐CD11b, anti‐CD19, anti‐CD45, or anti‐HLA‐DR antibodies (1 mg/mL; Abcam) at room temperature for 30 minutes, washed with phosphate‐buffered saline (PBS), and analyzed with a MoFlo XDP flow cytometer (Beckman Coulter, Brea, California) and Kaluza software (Beckman Coulter).
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5

Characterization of Mesenchymal Stem Cells

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Anti-CD9, anti-CD63, anti-Alix, anti-calnexin, anti-CD31, anti-CD34, anti-CD45, anti-CD73, Anti-CD90, anti-CD105, anti-Collagen I, and anti-Fibronectin antibodies were purchased from Abcam (Cambridge, UK). Anti-Ki-67, anti-RhoA, anti-Rac1, anti-Cdc42, and anti-β-actin antibodies were purchased from Cell Signaling Technology (Danvers, USA). Alexa Fluor 488- and Alexa Fluor 568-conjugated secondary antibodies were purchased from Proteintech (Rosemont, IL, USA). IRDye 800cw-conjugated goat anti-rabbit/anti-mouse IgG secondary antibodies were purchased from Abbkine (Redlands, CA, USA). PKH-26 and PKH-67 kits were purchased from Sigma-Aldrich (St. Louis, MO, USA). Lipofectamine™ RNAiMAX, FM™ 4-64FX, and ActinGreen™ 488 were purchased from Thermo Fisher (Eugene, Oregon, USA). SiCdc42, Cdc42-EGFP, and Cdc42-mCherry fusion protein expression plasmids were purchased from GenePharma (Suzhou, China). The Cdc42 inhibitor ML141 was purchased from MedChemExpress (Monmouth Junction, USA).
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6

Characterization and Differentiation of pMSCs

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pMSC were characterised by flow cytometry using anti-porcine specific or cross-reactive antibodies as previously described [28 (link)]. In particular, anti-CD45 (LifeSpan Biosciences, Seattle, Washington), CD29 (Acris Antibodies, Herford, Germany), anti-CD90, anti-CD11b and anti-CD105 (all from Abcam, Cambridge, UK) were used. Cells were tested for their ability to differentiate into osteoblasts and adipocytes at early passages (P3), as previously described [28 (link)].
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7

Flow Cytometry Analysis of ASCs

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A flow cytometric assay of cell surface marker expression was conducted in 1 × 106 ASCs that had been stained with anti-CD90, anti-CD73, anti-CD105, anti-CD34, anti-CD11b, anti-CD19, anti-CD45, and anti-HLADR antibodies (1 mg/ml; Abcam, Cambridge, UK) and suspended in PBS. The samples were incubated for 30 minutes at room temperature, washed with PBS, and then analyzed with a MoFlo XDP flow cytometer (Beckman Coulter, Brea, CA) and Kaluza software (Beckman Coulter).
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8

Immunophenotyping of Encapsulated rMSCs

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Cells were encapsulated at a concentration of 3 million cells mL−1 and cultured in cell culture media, as explained above. The media was changed every 3 days, and on day 4 the cells were fixed, permeabilized, blocked, and stained for DAPI (Sigma-Aldrich, 1:1000), Rhodamine Phalloidin (Cytoskeleton, 1:300), and Anti-CD105 (Abcam, 1:250) as described above. For the Blebbistatin inhibition study, cell culture media containing the additional Blebbistatin (Sigma-Aldrich) at a concentration of 30 μm was replenished every 3 days. After 4 days, the cells were again fixed, permeabilized, blocked, and stained for DAPI (Sigma-Aldrich, 1:1000), Rhodamine Phalloidin (Cytoskeleton, 1:300), Anti-CD29 (BD, 1:250), and Anti-CD44 (Abcam, 1:250). The labeled rMSCs were imaged using confocal microscopy (Zeiss LSM 710) with a Plan-Aprochromat 20x (NA −1.0) water objective. ImageJ was used to visualize and quantify CD105, CD29, and CD44 positive cells.
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9

Characterization of Cultured Adipose-Derived Stem Cells

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Cultured ADSCs at passage three were characterized by flow cytometric evaluation of the expression of MSCs markers (CD29, CD44, CD105) with negative expression of hematopoietic and endothelial markers (CD45, CD34, CD31), this was performed following previously published protocols [24 (link),30 (link)]. Briefly, ADSCs were detached, centrifuged to pellet the cells, washed twice, and fixed with 10% neutral buffered formalin for 30 min, washed again, and finally the cell pellet was resuspended in 100 µL FACS buffer containing primary antibody for 60 min at room temperature in the dark. The primary antibodies are FITC-labeled anti-CD29 (BioLegend, San Diego, CA, USA), anti-CD44 (BD Pharmingen, San Diego, CA, USA), anti-CD105 (abcam, San Diego, CA, USA), anti-CD45 (BioLegend, San Diego, CA, USA), anti-CD34 (BD Pharmingen, San Diego, CA, USA), and anti-CD31 (BD Pharmingen, San Diego, CA, USA). Then, propidium iodide was added to exclude dead cells, and the data was obtained on an Attune NxT Flow Cytometer (Applied Biosystems, Waltham, MA, USA). Twenty-thousand events were acquired, and the data was analyzed by Attune NxT Software v 3.1 (Applied Biosystems, Waltham, MA, USA).
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10

Immunophenotyping of PDLSCs

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PDLSCs were cultured on 24-well plates with glass coverslips at a density of 105 cells/well overnight. Then, PDLSCs were fixed with 4% paraformaldehyde and incubated with anti-CD146 (1:100; Abcam, USA), anti-CD105 (1:100; Abcam, USA), and anti-CD45 (1:200; Abcam, USA) primary antibodies. The samples were then treated with rhodamine/FITC-conjugated secondary antibodies (1:1000; Sigma-Aldrich, USA) and stained with 4,6-diamidino-2-phenylindole (Sigma-Aldrich, USA). Jurkat cells were stained with anti-CD45 antibody as a positive control. The images were captured with a fluorescence microscopy (OLYMPUS, Japan).
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