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17 protocols using ll 37

1

Vitamin D, Inflammation, and Immune Biomarkers

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Blood samples were obtained at the first and last study visits and stored at −80°C until determination. 25(OH)D concentrations were assessed by isotope dilution/online solid-phase extraction liquid chromatography/tandem mass spectrometry (ID-XLC-MS/MS) at the Endocrine Laboratory of the Amsterdam University Medical Center (22 (link)). The limit of quantitation was 4.0 nmol/L; intra-assay CV was <6% and interassay CV was <8% for concentrations between 25 and 180 nmol/L. 25(OH)D2 and 25(OH)D3 were measured separately. Plasma C-reactive protein (CRP), IL-6, and LL-37 concentrations were measured at the Leiden University Medical Center according to the manufacturer's instructions (CRP and IL-6: Meso Scale Diagnostics; LL-37: Hycult Biotech).
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2

Vitamin D and Immune Biomarkers Analysis

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Frozen serum samples collected at baseline of the APPLE trial were available for analysis. 25OHD, PTH and LL-37 levels were measured. 25OHD was measured using the automated chemiluminescent technique (IDS-iSYS automated machine, Immunodiagnostic Systems, Fountain Hills, Arizona, USA) in a laboratory that participates in the National Institute of Standards and Technology (NIST)/National Institutes of Helath (NIH) Vitamin D Quality Assurance Programme and the Vitamin D External Quality Assessment Scheme (Emory University, Atlanta, Georgia, USA). PTH was measured by ELISA (Immutopics, San Clemente, California, USA) as was LL-37 (Hycult Biotech, Uden, Netherlands).
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3

Neutrophil Protease Quantification by ELISA

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Isolated neutrophils were seeded at a concentration of 2 × 106 cells/ml, stimulated with 50 nM PMA, washed, digested with S7 nuclease (Cayman Chemicals) for 20 min, centrifuged and stored at −20°C. Neutrophil elastase, myeloperoxidase (both from Abcam), LL37 (Hycult Biotech, Wayne, NJ, United States) and DNA-histone associated complex (Sigma-Aldrich, St. Luis, United States) concentrations were evaluated by ELISA. The DNase I concentration in the human serum was also determined by ELISA (LifeSpan BioSciences, Seattle, WA, United States).
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4

Urinary AMP Biomarkers in UPJO

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Based on our prior study finding that the AMPs beta defensin 1 (BD-1), hepatocarcinomatous-intestine-pancreas/pancreatitis-associated protein (HIP/PAP), cathelicidin (LL-37), and neutrophil gelatinase-associated lipocalin (NGAL) were significantly elevated in patients with UPJO compared to controls [12 (link)], we performed enzyme-linked immunosorbent assays (ELISA) on these four AMPs to compare their expression before (Pre) and after (Post) surgical intervention.
BD-1 was run at 1:1000 dilution (Peprotech, Rocky Hill, NJ) while HIP/PAP (Fisher Scientific, Pittsburgh, PA), LL-37 (Hycult Biotech, Plymouth Meeting, PA), and NGAL (Hycult Biotech, Plymouth Meeting, PA) were all run undiluted. ELISAs were performed in duplicate on cell-free supernatants. Due to observed variability between ELISA plate readings, corresponding comparison groups were run on the same ELISA plate. AMP levels were normalized to urine creatinine (UCr) as previously described [12 (link)] and expressed as a ratio to UCr (ng/mg).
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5

Quantifying Immune Mediators in ILD

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BAL concentrations of lactoferrin (Assaypro LLC, St. Charles, MO, USA), SLPI (FineTest, Wuhan, China), lysozyme (Assaypro), LL-37 (HycultBiotech, Plymouth Meeting, PA, USA), IL-10 (Immunotools), TGF-β (Mabtech, Nacka Strand, Sweden), TNF-α (Mabtech), and IL-17A (PeproTech EC, London, UK) from ILD patients were determined using specific ELISA kits according to the manufacturers’ instructions and using the specific standard curves of recombinant molecules. The limits of detection were as follows: 0.313–20 ng/mL for SLPI, 62.5–4000 pg/mL for lactoferrin, 0.078–5 ng/mL for lysozyme, 0.14–100 ng/mL for LL-37, 15.62–1000 pg/mL for IL-10, 62.5–4000 pg/mL for TGF-β, 15.62–1000 pg/mL for TNF-α, and 15.62–1000 pg/mL for IL-17A.
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6

Quantifying Antimicrobial Peptides in BAL

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LL-37 (Hycult,Biotech, Netherlands), α-defensins-1,2,3 (Hycult Biotech, Netherlands), and β-defensin-2 (Pepro-Tech, Rocky Hill, NJ, USA) levels were analyzed as 50 μl of BAL fluid supernatant combined with 50 μl sample diluent from the above commercially available kits according to the manufactures’ instructions (Mallia et al., 2012 (link)). All measurements were performed twice for the same sample and results were averaged.
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7

ELISA Quantification of LL-37 and hBD-2

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ELISA kits were used to measure plasma concentrations of LL-37 (Hycult Biotech; Uden, The Netherlands) and hBD-2 (Phoenix Pharmaceuticals, Inc.; Burlingame, CA).
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8

Quantitative Skin Biomarker Analysis

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ELISA was performed for interleukin (IL)-6, IL-8, hBD1, hBD2 (PeproTech), s100A7 (CircuLex), RNASE7 (CUSABIO), and LL37 (Hycult Biotech) according to each manufacturer’s protocol. Protein concentrations of skin homogenates were determined using a bicinchoninic acid (BCA) assay kit (Thermo Scientific). The ELISA results were then normalized to total protein concentrations. These analyses were performed in duplicate.
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9

Quantifying Antimicrobial Peptides in Biological Samples

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Levels of HDPs LL-37 (ng/mL), HBD-1 (pg/mL), and HD-5 (pg/mL) were measured in plasma and stool extracts by using enzyme-linked immunosorbent assay (ELISA) kits (LL37, Hycult Biotech; HBD-1, Alpha Diagnostic International; HD-5, Elabscience) according to manufacturers’ instructions.
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10

Salivary Biomarkers for Evaluating Mucosal Immunity

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Salivary immunity was evaluated using commercially available enzyme-linked immunosorbent assay (ELISA) kits. First, mucosal immune competency was characterized by measuring salivary sIgA and alpha-amylase (Salimetrics, State College, PA, USA). Next, salivary antimicrobial proteins (AMP) HNP1-3, LL-37 (Hycult Biotech, Uden, The Netherlands), and lactoferrin (Biomatik, Kitchener, Ontario, Canada) concentrations were determined. Finally, lung inflammation, a marker of overall lung health, was assessed by salivary surfactant protein A (SP-A) (Biomatik, Kitchener, Ontario, Canada), secretory leucocyte protease inhibitor (SLPI) (R&D Systems, Minneapolis, MN, USA) and salivary neutrophil Elastase-alpha-1-antitrypsin complex (Hycult Biotech, Uden, The Netherlands) concentrations47 (link),48 (link). According to manufacturers’ instructions, all samples were tested in duplicate, read on a plate reader (SprectraMax i3x, Molecular Devices; San Jose, CA) and concentrations were calculated on absorbance reading based on standard curves. Salivary biomarker concentrations were then converted to secretion rates by multiplying the concentrations by salivary flow rate. Unfortunately, technical limitations associated with saliva collection led to low volume recovery in some participants, and some analyses were conducted on a reduced sample size.
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