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Hibernate a solution

Manufactured by Transnetyx
Sourced in United States

Hibernate A solution is a lab equipment product. It serves the core function of preserving biological samples in a stable state.

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2 protocols using hibernate a solution

1

Brain EV Isolation and Purification

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Brain EVs were isolated and purified as we have previously described.9 Briefly, frozen brain tissues were treated with 20 units/mL of papain (Worthington, Lakewood, NJ, USA) in Hibernate A solution (HA, 3.5 mL/sample; BrainBits, Springfield, IL, USA) for 15 minutes at 37°C. The brain tissue was gently dissociated in 6.5 mL of cold HA supplemented with protease inhibitors, centrifuged at 300 g for 10 minutes at 4°C to discard the cells, and the supernatant was sequentially filtered through a 40 μm mesh filter (BD Biosciences, San Jose, CA, USA) and a 0.2 μm syringe filter (Corning Life Sciences, Teterboro, NJ, USA). The filtrates were sequentially centrifuged at 4°C, at 2000 g for 10 minutes and 10 000 g for 30 minutes to discard membranes and debris, and at 100 000 g for 70 minutes to pellet the EVs. The EV pellet was resuspended in 60 mL of cold PBS (Thermo Fisher Scientific), and centrifuged at 100 000 g for 70 minutes at 4°C. The washed EV pellet was resuspended in 2 mL of 0.95 M sucrose solution and inserted inside a sucrose step gradient column (six 2‐mL steps from 2.0 to 0.25 M sucrose). The sucrose step gradient was centrifuged at 200 000 g for 16 hours and fractions were collected from the top of the gradient. The fractions were diluted in cold PBS and centrifuged at 100 000 g for 70 minutes for pellet collection.
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2

Single-Cell RNA-seq of Dentate Gyri

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Homozygous Nestin:CFPnuc mice (Strain: B6.Cg-Tg(Nes-CFP)1Enik/J) (Encinas et al., 2006 (link)) were used for all single-cell RNA-seq experiments (Shin et al., 2015 (link)). Mice were euthanized by cervical dislocation, and brains were immediately immersed into cold Hibernate A solution (BrainBits). Dentate gyri were dissected under a stereomicroscope as previously described (Hagihara et al., 2009 ). All procedures were performed with approved protocols in accordance with institutional animal guidelines. The single cell suspension was prepared by using Neural Tissue Dissociation Kit (P), with the addition of one cleaning step with Percoll (1:10 dilution) to remove myelin layer and cellular debris. Propidium Iodide was added to determine cell viability and cells were sorted on a BD FACS Aria II with a 70µm nozzle at 13 psi (Figure S3). Single cells were collected onto the ice-cold 8-sample parafilm-covered glass slides with 1.25uL of 1X lysis mixture (Clontech Laboratories SMART-Seq v4 Ultra Low Input RNA Kit for sequencing) and immediately transferred in individual 0.2-ml RNase-free 8-well strip (Figure S3). To avoid any effects due to the FACS sorting protocol, cells were kept on ice the entire procedure, and the actual collection was performed at 4°C.
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