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17 protocols using visiprep spe vacuum manifold

1

Solid-Phase Extraction of E2 Samples

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Based on previous studies suggesting a greater recovery rate of E2 using combined ether and solid-phase extraction techniques (32 ), samples were resuspended in 500 μl of .1M PB and vortexed for 2 minutes at low speed before solid-phase extraction using a Visiprep SPE vacuum manifold (Sigma-Aldrich) and 1 mL/500 mg C18 cartridges (Agilent, Santa Clara, CA). Cartridges were conditioned by loading 500 μl of 100% MeOH and then equilibrating with 750 μl ultrapure H20 while under low vacuum pressure so as not to dry the cartridges. 500 μl of sample was then slowly loaded to each column and eluted into a waste collection container while under gentle vacuum pressure. Columns were next washed with 750 μl of ultrapure H20 and allowed to dry for 3 minutes under vacuum pressure. At this point, the waste collection container was replaced with the final collection tubes (Kimble Chase, glass 4 ml round-bottom tubes) and 250 μl of 100% MeOH was added to columns (2×) and allowed to soak for 2 minutes before elution by gravity. After both aliquots of MeOH passed through the columns, cartridges were allowed to dry under vacuum pressure for 5 minutes. Samples were fully evaporated under a gentle stream of air in a 50°C water bath and subsequently stored at −20°C until processing for EIA.
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2

Lipid Fractionation Using SPE

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Total lipid extracts were fractionated using aminopropyl SPE cartridges (Discovery DSC-NH2, ref. 52637-U Supelco, Sigma-Aldrich), coupled to a vacuum manifold (Visiprep SPE Vacuum Manifold, ref. Supelco-57030-U, Sigma-Aldrich) to obtain lipid fractions of different lipid classes (NL, intermediate polarity lipids and polar lipids). The procedure was adapted from Ruíz et al. (2004) [70 (link)]. Briefly, it consisted of conditioning the cartridge with n-hexane; loading with the lipid extract (40 mg dissolved in CHCl3); elution of the NL with CHCl3 (fraction 1); elution of lipids of intermediate polarity with diethyl ether/acetic acid (98:2, by volume, fraction 2); and, finally, the elution of the polar lipids with CHCl3/MeOH (1:6, by volume, fraction 3) and CHCl3/MeOH (1:1, by volume, fraction 4). Each fraction was collected into glass tubes, dried under nitrogen and transferred to 2 mL amber glass vials. The yield of the NL fraction was determined by gravimetry. The amount of phospholipids was determined before HPLC-MS analysis in the polar lipid-rich fractions (fractions 3 and 4 were combined), according to Rouser et al. (1970) [71 (link)].
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3

Phenolic Acid Extraction from Plant Material

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First, 0.2 g of plant material was extracted with 15 mL of 80% MeOH for 30 min using an ultrasonic bath (Sonic-6D, Polsonic, Warsaw, Poland). The extract was then centrifuged at 5000× g for 30 min. The supernatant was collected and evaporated under a vacuum at 40 °C (Hei-VAP Precision, Heidolph Instruments GmbH & Co. KG, Schwabach, Germany). The residue was suspended in water and applied onto an SPE (solid phase extraction) column, equilibrated with water. SPE was carried out with a Visiprep™ SPE Vacuum Manifold (Sigma-Aldrich, Poznan, Poland), using a Chromabond C18ec column (Macherey-Nagel GmbH & Co. KG, Dueren, Germany). The column was washed with H2O and the phenolic acids were eluted with methanol.
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4

Extraction of Honey Phenolics

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Honey samples (5 g) were mixed with 20 mL of deionized water adjusted to pH 2 with HCl and stirred in a magnetic stirrer for 15 min. The samples were then filtered to remove the solid particles. Extraction of phenolic compounds was performed with the Visiprep™ SPE Vacuum Manifold (Sigma-Aldrich, Saint Louis, MO, USA). The SPE cartridges used were Strata-X (500 mg) obtained from Phenomenex (Warsaw, Poland). They were conditioned by washing with 15 mL of methanol, and 20 mL acidified water. Afterwards the filtrated honey sample was passed through a cartridge, which was then washed with 20 mL of deionized water to remove all sugars and other polar constituents of honey. The adsorbed compounds were eluted with 5 mL methanol [60 (link)].
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5

Black Walnut Kernel Extraction

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The hulled nuts were cracked manually and then the shells were removed to collect peeled kernels of black walnuts. The peeled kernels were homogenized using a coffee grinder and were extracted as described previously10 (link). Briefly, the homogenized samples (100 g, dry weight basis, 20–30 mesh) were extracted in 400 ml methanol twice and then sonicated at 10 °C for 60 min, followed by centrifugation for 10 min at 4550 g. Several extractions of different peeled kernels derived from each black cultivar were performed and utilized in at least triplicate in quantitative analyses and in vitro assays. The methanolic extracts were filtered through a 0.2 µm Whatman filter paper (GE Healthcare, Chicago, IL, USA) under SPE Vacuum Manifold (Visiprep™ SPE Vacuum Manifold, Sigma-Aldrich, St. Louis, MO, USA). The resulting supernatant was then collected and stored at − 20 °C until analysis.
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6

Synthesis and Characterization of OPE Metabolites

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The abbreviations and structures of OPE metabolites and their parent compounds are shown in Table S1 and Figure S1 in supporting information (SI). Standards of 4-HO-TPHP, 4-HO-DPHP, 3-HO-TBOEP, BBOEP, BBOEHEP, BCIPP, BCIPHIPP, BCEP, BDCIPP, EHPHP, and 5-HO-EHDPHP, and mass-labeled standards of TCEP-D12, BBOEHEP-D4, BBOEP-D4, BCEP-D8, BDCIPP-D10, and TBOEP-D6 were synthesized by Dr. Vladimir Belov (Max Planck Institute, Göttingen, Germany). TCEP was obtained from Chiron AS (Trondheim, Norway). DNBP, DPHP, DPHP-D10, and TPHP-D15 were supplied by Sigma-Aldrich (Bornem, Belgium).
The purities of all target analytes were >98%. Stock solutions of both native and internal standards (IS) were prepared in acetonitrile (ACN) at 2 and 10 ng/μL, respectively. Liquid chromatography-grade (LC-grade) ACN and methanol (MeOH) were obtained from Merck (LiChrosolv, Merk, Darmstadt, Germany). Formic acid (99-100%) and ammonium acetate (NH4AC) were of LC-grade and purchased from Sigma-Aldrich (Bornem, Belgium). Milli-Q water was generated by a PURELAB Flex system (ρ = 18.2 MΩ/cm, Elga Veolia, Tienen, Belgium). β-Glucuronidase enzyme solution was purchased from Sigma-Aldrich (lyophilized powder from E. coli, >10,000,000 unit/g). Solid-phase extraction (SPE) was performed using a Visiprep SPE vacuum manifold with 24 ports (Sigma-Aldrich).
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7

Synthesis and Analytical Procedures for Flame Retardants

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HO-TBOEP, EHDPHP, HO-TPHP, HO-DPHP, BBOEHEP, BCIPP, BCIPHIPP, EHPHP, HO-EHDPHP, BCEP, TCEP-D12, BBOEHEP-D 4 , BDCIPP-D 10 , and TBOEP-D 6 were custom synthesized by Dr. Vladimir Belov (Max Planck Institute, Göttingen, Germany). Purity was more than 98% as measured by MS and NMR techniques. TCEP was purchased from Chiron AS (Trondheim, Norway). TBOEP, DPHP and DPHP-D 10 were purchased from Sigma-Aldrich (Bornem, Belgium). TPHP standard was purchased from Chiron AS (Trondheim, Norway). TCIPP standard was acquired from Pfalz & Bauer (Waterbury, USA). Methanol was LC-grade and was purchased from Merck (LiChrosolv®, Merk, Darmstadt, Germany), whilst hydrochloric acid (37%), formic acid (99-100%) and ammonium acetate were of analytical-grade and were purchased from Sigma Aldrich (Bornem, Belgium). Ultrapure water (UPW) was obtained from a PURELAB Flex system (ρ = 18.2 MΩ/cm, Elga Veolia, Tienen, Belgium). β-glucuronidase enzyme solution was purchased from Sigma Aldrich (lypophilized powder from E. coli, >10 000 000 unit/g). Solid-phase extraction (SPE) was performed using a Visiprep SPE vacuum manifold with 24 ports (Sigma Aldrich). Filtration of wastewater samples was carried out using glass microfiber filters (GF/A, 1.6 µm, Whatman, Sigma-Aldrich).
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8

SPE Purification for HPLC Analysis

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An additional step to purify the extracts was necessary, before HPLC analysis. Solid-phase extraction (SPE) is a suitable technique for purifying extracts to remove co-extracted compounds. SPE was performed according to the method described by Christou et al. [8 (link)]. A vacuum manifold system with a 12-positions rack (Visiprep™ SPE Vacuum Manifold, SUPELCO, St. Louis, MO, USA) was utilized for all SPE experiments. Discovery DPA-6S (500 mg, SUPELCO, St. Louis, MO, USA) SPE polyamide cartridges were used for the purification of the extracts. The polyamide cartridges were preconditioned with 5 mL of methanol (MeOH) and equilibrated with 5 mL of acidified methanolic solution, 20:80 (v/v) MeOH: H2O, acidified to pH 2.0 with HCl. The obtained lyophilized extracts were re-dissolved in acidified methanolic solution (20 mL) and then loaded into the cartridges. Subsequently, the cartridges were washed with 5 mL of acidified water (pH 2.0) to remove co-extracted compounds. Finally, the purified extracts were obtained after eluting the bound phenolics from the cartridges with an aqueous acetone mixture (2 × 5 mL, 80% v/v). The purified extracts were then dried using a rotary evaporator and lyophilizer. The dry residues were redissolved in an appropriate volume of MeOH, filtrated through a 0.45-μm pore size membrane filter, properly diluted, and injected into the HPLC system.
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9

HPLC-UV Analysis of FLU in Guinea Pig Plasma

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The plasma concentrations of FLU were analyzed by high-performance liquid chromatography (HPLC) with ultraviolet detection and solid-phase extraction (SPE) according to the procedure described by Ferreira et al. [22 (link)], adapted and optimized for guinea pig plasma. Plasma samples were subjected to SPE clean-up using Discovery 18-LT extraction cartridges (500 mg, 3 ml) (Supelco, USA) connected to a Visiprep SPE vacuum manifold (Supelco, USA), using acetonitrile as eluent solvent. The eluate was evaporated to dryness and reconstituted in 100 μl acetonitrile. The chromatographic separation was performed using a C18 column (Kromasil, 3.5 µm; 4.6 × 100 mm; Tedia, Rio de Janeiro, Brazil), preceded by a C18 guard column (Kromasil, 3.5 µm; 4.6 × 10 mm; Tedia, Rio de Janeiro, Brazil), both maintained at 25 °C. The mobile phase consisted of acetonitrile: water (80:20, v/v) with a flow rate of 1.0 ml/min. The UV wavelength was set at 260 nm, and the injection volume was 20 µl.
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10

Plasma Lipid Extraction for Lipidomics

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The PL were extracted from plasma samples by solid-phase extraction (SPE) with a Visiprep SPE vacuum Manifold (Supelco, Sigma-Aldrich, Bellefonte, PA, USA) 34, (link)35 (link) . Briefly, protein precipitation was performed by mixing 100 µL of plasma sample with 900 µL of acetonitrile (ACN) with 1% formic acid, followed by vortexing (30 s) and centrifugation (626 ×g, 5 min). The resulting supernatant was transferred to a SPE column (HybridSPE-Phospholipid 30 mg, SUPELCO, Sigma-Aldrich, Bellefonte, PA, USA), after conditioning step (1 mL of ACN). As most supernatant was eluted, the column was washed with 1 mL of ACN with 1% formic acid and 1 mL of ACN. The PL were then eluted with ACN with 5% aqueous ammonia (2 x 1 mL). The PL were recovered and dried under a nitrogen stream. The extracts were then dissolved in dichloromethane and filtered using a HAMILTON glass syringe and syringe filter (0.22 µm pore size, 4 mm diameter, Millex-GV Durapore® (PVDF) membrane, hydrophilic, Millipore Corporation, Billerica, MA, USA). The filtered samples were collected in amber vials, dried and stored at -80 ºC until further lipid analysis.
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