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7 protocols using rho kinase inhibitor y 27632

1

Culturing Human Umbilical Vein Endothelial Cells

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Human umbilical vein endothelial cells (HUVECs) were purchased from Takara Bio Inc. (Kusatsu, Japan). The cells were cultured in EGM-2 medium (Lonza, Basel, Switzerland) supplemented with EGM-2 BulletKit (Lonza), 100 U/ml penicillin, 100 μg/ml streptomycin (FUJIFILM Wako Pure Chemical Corporation, Osaka, Japan), and 10 μM Rho-kinase inhibitor Y27632 (Selleck Chemicals, Houston, TX), which promotes the proliferation of endothelial cells [18 (link)].
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2

Modulating Retinoic Acid Receptor Pathway

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For RAR pathway modulation, cells were treated for 24 hours either with 0.5 µM RA or with 5 µM BMS493 (a pan‐retinoic acid receptor inverse agonist) or with a combination of RA and BMS493, directly diluted in the culture media. For EBs formation assay, cells were dissociated into single cells using StemPro Accutase (Thermo Fisher Scientific) and cultured for 7 days on poly (2‐hydroxyethyl methacrylate) (Sigma‐Aldrich) – coated dishes in mTeSR1 medium supplemented with 10 µM of the Rho‐kinase inhibitor Y‐27632 (Selleckchem) for the first three days. At day 7, floating EBs were transferred on 5 µg/mL Biolaminin 521LN (Biolamina)‐coated plates and cultured in adhesion for additional thirteen days in medium consisting of DMEM/F12 containing 20% knockout serum replacement (KSR, Thermo Fisher Scientific), 1% Glutamax (Thermo Fisher Scientific), 1% non‐essential Amino Acids (Thermo Fisher Scientific), 100 µM 2‐mercaptoethanol and 0.5% penicillin and streptomycin.
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3

Embryoid Body Differentiation from hPSCs

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For EB formation, hiPSCs and hESCs were dissociated into single cells by Accutase (Thermo Fisher Scientific) and cultured on an ultralow attachment plate (Corning) with mTeSR1 medium supplemented with 10 μM Rho-kinase inhibitor Y-27632 (Selleckchem) for 3 days to enable cell aggregation. After 3 days, the medium was switched to DMEM/F12 containing a 20% knockout serum replacement (KSR), 2 mM l-glutamine, 1 × 10−4 M nonessential amino acids, 1 × 10−4 M 2-mercaptoethanol, and 0.5% penicillin and streptomycin (all from Thermo Fisher Scientific). The medium was changed every other day until day 8 [1 (link)]. After 8 days in culture as floating EBs, cell aggregates were transferred onto 0.1% gelatin-coated plates (Sigma-Aldrich) and cultured in the same medium for an additional 8 days before collecting the EBs for immunofluorescence and qRT-PCR analyses.
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Isolation and Culture of Human Corneal and Conjunctival Epithelial Cells

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Human primary CoEpiCs and CjEpiCs were obtained from donor corneas (CorneaGen, Seattle Eye Bank, Seattle, WA, USA). The cells were isolated and cultured following a previously described method [16 (link)] with slight modifications. The corneal and conjunctival epithelium were peeled off after overnight treatment with dispase type II (Godo Shusei, Tokyo, Japan) at a concentration of 1000 PU/mL at 4°C. The epithelial cells were then dissociated into single cells by incubation with TrypLE™ Express (Thermo Fisher Scientific, Waltham, MA, USA) for 5 min at 37°C and seeded into a single well of a 6-well plate. The CoEpiCs and CjEpiCs were cultured at 37°C, 95% humidity, and 5% CO2 in complete medium [17 (link)], consisting of Dulbecco’s modified Eagle’s medium and Ham’s F-12 media (DMEM/F12, 1:1 mixture) (Thermo Fisher Scientific), B-27™ supplement (2%) (Thermo Fisher Scientific), Rho-kinase inhibitor Y-27632 (10 μM) (Selleck Chemicals, Houston, TX, USA), keratinocyte growth factor (10 ng/ml) (Thermo Fisher Scientific), and penicillin-streptomycin (50 IU/ml) (Nacalai Tesque, Kyoto, Japan). The cells were used for subsequent experiments after one passage.
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5

Geniposide Extraction and Signaling Pathways

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Geniposide was extracted and purified from G. jasminoides Ellis (purity > 98%), and provided by the National Institute for the Control of Pharmaceutical and Biological Products (Beijing, China). Fetal bovine serum (FBS) was obtained from HyClone (Logan, United States). Rabbit monoclonal antibodies against p38, p-p38, NF-κB p65 and NF-κB p65 were supplied from Cell Signaling Technology (Beverly, MA, United States). Anti-RhoA antibody was purchased from Abcam (Cambridge, MA, United States). β-actin and HRP-conjugated goat anti-rabbit antibodies were provided by ZSGB-BIO (Beijing, China). Rho-kinase inhibitor (Y-27632) was obtained from Selleck (Houston, TX, United States). Rat IL-4, IL-1β, IL-17 and TGF-β ELISA kits were purchased from Elabscience Biotechnology (Wuhan, China). Freund’s Complete Adjuvant (FCA) and LPS were supplied from Sigma Chemical Company (St. Louis, MO, United States). Other chemicals that have been used in this work were of research grade.
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6

Culturing Human Corneal Endothelial Cells

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We utilized primary CEnCs isolated from human donor corneas (CorneaGen, Seattle Eye Bank, WA, USA). The hCEnCs were cultured following established protocols with slight modifications [32 (link), 41 (link)]. Briefly, the Descemet’s membranes with the CEnCs were stripped from donor corneas and digested at 37°C using 1 mg/mL collagenase A (Roche Applied Science, Penzberg, Germany) for 12 h. Subsequently, the hCEnCs obtained from a single donor cornea were collected following two washes with OptiMEM-I (Thermo Fisher Scientific, Inc., Waltham, MA, USA) and then seeded in one well of a 6-well plate that had been pre-coated with laminin E8 fragments (iMatrix-511; Nippi, Incorporated, Tokyo, Japan) [42 (link)].
hCEnCs were cultured at 37°C with 95% humidity and 5% CO2 in complete hCEnC medium, which consisted of OptiMEM-I (Thermo Fisher Scientific), 8% fetal bovine serum (FBS), 20 μg/mL ascorbic acid (Sigma-Aldrich, St. Louis, MO, USA), 200 mg/L calcium chloride, 0.08% chondroitin sulfate (Sigma-Aldrich), Rho-kinase inhibitor Y-27632 (10 μM) (Selleck Chemicals, Houston, TX), and penicillin-streptomycin (50 IU/ml) (Nacalai Tesque, Kyoto, Japan). Cultured hCEnCs were passaged after harvest with 10xTrypLE Select (Thermo Fisher Scientific, Inc.) treatment at 37°C for 12 min when they reached confluence and used for subsequent experiments. hCEnCs at passage 2 were used for all experiments.
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7

Isolation and Culture of Colon Cancer Organoids

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Isolation and propagation of primary human colonic epithelial and CRC cells from tissue specimens have been described previously.54 (link) Matrigel (Corning Inc., Corning, NY)-embedded tumor cells were maintained in tumor organoid culture (TOC) medium (advanced Dulbecco’s modified Eagle medium/F12 [ADF] supplemented with 10 mmol/L HEPES, Glutamax, 1 × B27; all Thermo Fisher Scientific), 1 mmol/L N-acetylcysteine (Sigma), 50 ng/mL recombinant human epidermal growth factor (EGF; PeproTech, Hamburg, Germany), 0.015 μmol/L prostaglandin E2 (Sigma), 25 ng/mL human noggin (PeproTech), 7.5 μmol/L p38 inhibitor (SB202190; Sigma), 0.5 μmol/L transforming growth factor β inhibitor (LY2157299; Selleckchem), and 50 μg/mL normocin (Invitrogen, Carlsbad, CA). Besides this, 10 μmol/L Rho kinase inhibitor (Y27632; Selleckchem) was added to the medium for 48 hours after plating to avoid anoikis. Medium was replaced every 2–3 days. For serial passaging, embedded PDTOs were disaggregated using 0.025% Trypsin (Gibco, Thermo Fisher) for 10 minutes at 37°C, and subsequently passed through a 0.8-mm needle by a syringe. After washing with ADF medium, PDTO cells were counted and 5000–15,000 cells/50 μL Matrigel were reseeded in 3D, and overlaid with TOC medium.
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