The largest database of trusted experimental protocols

4 protocols using anti paxillin

1

Integrin-Mediated Cell Adhesion Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following antibodies were used: antibody against human β1 integrin, isotype antibody control IgG2a,κ, anti-FN, anti-tensin (all from BD Biosciences), anti-human integrin-α5 nonfunction-blocking mAb11 [26 (link)], anti-human integrin-α5 inhibitory mAb16 [27 (link)], anti-human integrin-β1 inhibitory mAb13 [28 (link)], anti-human integrin-αV L230 (ATCC), anti-human FN mAb 13G12 [28 (link)], anti-β3 integrin (sc-7311; Santa Cruz Biotechnologies), anti-phospho-FAK (Fischer Scientific). Other antibodies used were from Sigma-Aldrich: anti-actin, anti-talin, anti-α-actinin, anti-vinculin and anti-paxillin. Secondary species–specific FITC-, Cy3- or AMCA-conjugated antibodies were from Jackson ImmunoResearch Laboratories. Rhodamine-phalloidin was from Fischer Scientific.
Human plasma FN was purified according to Miekka [29 (link)] and 70kD fibronectin fragment was obtained as described [30 (link)]. The 120kD fragment from plasma FN was purchased from Merck. Fibronectin-depleted FBS was obtained by the use of Gelatin-Sepharose 4B (LKB) as described by Knox [31 (link)]. Cellular fibronectin was purified according to Yamada et al. [32 (link)]. HiLyte Fluor™ 488 labeled bovine FN was purchased from Cytoskeleton Inc.
+ Open protocol
+ Expand
2

Immunocytochemical Analysis of MSCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
7 × 103 MSCs were grown and treated with MV130 on chamber slides. After fixation with 4% paraformaldehyde and permeabilized with 0.05% saponin, nonspecific epitopes were blocked with PBS containing 10% donkey serum. Then, cells were sequentially incubated with the primary antibody for 45 minutes at room temperature: Texas Red-conjugated-Phalloidin (Thermo Fisher Scientific); anti-CD63 (46 (link)); anti-LAMP2 (Developmental Studies Hybridoma Bank at the University of Iowa); anti-HLA-DR (BD Biosciences); anti-paxillin (Sigma Aldrich) as appropriate. Next, cells were incubated for another 45 minutes with the appropriate secondary antibody: Alexa Fluor 594 conjugated donkey anti-mouse IgG; Alexa Fluor 488 conjugated donkey anti-rabbit IgG (both from Invitrogen, Life Technologies); DyLight 405 conjugated goat anti-mouse IgG (Jackson ImmunoResearch). Finally, a counter-staining of the nuclei was performed with Hoechst 33342 (Invitrogen, Life Technologies) for 10 minutes. After staining, preparations were mounted using FluorSave (Millipore) and imaged using a fluorescence microscope (Nikon Eclipse Ci) with a digital camera (Nikon DS-U3) and Nis-Elements D software. Images were assembled using ImageJ software.
+ Open protocol
+ Expand
3

Antibody-mediated Autophagy Regulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibodies used were as follows: anti-118Y-p-paxillin, anti-31Y-p-paxillin and anti-397Y-p-FAK (Invitrogen); anti-GFP, anti-β-actin, anti-Rab7, anti-p62 and anti-LC3B (Santa Cruz); anti-416Y-p-Src and anti-NBR1 (Cell signaling), anti-GFP (Roche); anti-LAMP-1 and anti-HA (Abcam); anti-LC3B, anti-Atg12 and anti-c-Cbl (Novus); anti-Rab5a (BD transduction laboratory); anti-paxillin, anti-Src and anti-FAK (Millipore); anti-LAMP1 (R&D systems); anti-FLAG (Sigma). Anti-mouse and anti-rabbit IgG-peroxidase-conjugated secondary antibodies for Western blot assays were from Bio-Rad. Alexa Fluor594 and 488 conjugated secondary antibodies were from Life Technology. Alexa Fluor 647 conjugated secondary antibodies were from Millipore. Epidermal growth factor was from Gibco; Histodenz (Nycodenz), nocodazole and chloroquine (CQ) were from Sigma-Aldrich. When indicated CQ was used at a concentration of 20 μM, a non-toxic concentration found to induce optimal autophagy inhibition (based on changes in LC3I/II ratio), which is in accordance with previous studies (Sandilands et. al.).
+ Open protocol
+ Expand
4

Paxillin and Rac Protein Isolation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Anti-Paxillin, anti-Rac, and fibronectin, purified from human plasma, were purchased from Millipore (Bedford, MA). Anti-GIT1, anti-βPIX were purchased from BD Biosciences. pEGFP-paxillin was purchased from Addgene.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!