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Apotome slider

Manufactured by Zeiss
Sourced in Germany

The ApoTome Slider is a microscopy accessory designed to enhance optical sectioning capabilities. It utilizes a structured illumination technique to improve image contrast and optical sectioning in fluorescence microscopy.

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5 protocols using apotome slider

1

Visualizing Insect Midgut Infection

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L3 S. frugiperda caterpillars were individually infected by feeding as in Section 2.3. Twenty four hours later, caterpillars were anesthetized on ice and sacrificed. In parallel, caterpillars were kept until death to insure their infection status. Sacrificed caterpillars were fixed in 4% PFA + 2.5% glutaraldehyde for 1h at 4 °C and dehydrated by incubations in increasing concentrations of ethanol (50% to 100%) before progressive embedding in 100% Unicryl resin (BB International) as described in [12 (link)]. Semi-thin sections (1 μm) were cut in the central part of the caterpillars corresponding to the midgut. After 45 min of incubation with WGA-FITC (1:300), to label GlcNAc and the PM, or with Phalloidin-FITC (1:300; Sigma), to label actin cytoskeleton, and 10 min with Dapi (1 μg/mL; Invitrogen) to label nuclei, semi-thin sections were mounted and observed with a Zeiss AxioImager Z2 microscope using the structured illumination module Zeiss ApoTome-slider as in 4.5. Images were taken with a CMOS Orca Flash 4.0 B&W camera using fixed parameters for all treatments and processed with Fiji software.
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2

Quantifying Spinal α2A-Adrenergic Receptor Expression

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For the α2A-AR immunoreaction, one in every fourth spinal sections was incubated with a rabbit-raised anti-α2A primary antibody (Neuromics; Cat. No. RA14110), diluted at 1:500, followed by incubation for 1 h with a donkey anti-rabbit Alexa 488 (Molecular Probes®; 1:1000). Photomicrographs were taken under the same time exposure, capture parameters and laser light wavelength (488 nm) on an ApoTome Slider (Zeiss®) fluorescence microscope coupled to the AxioVision Rel. 4.8. software (Zeiss®). The images were analyzed in order to calculate the percentage of pixels occupied by α2A-AR immunoreactivity, size and number of α2A-AR positive neurons in the spinal dorsal horn of 5 randomly taken sections using the ROI manager. The mean percentage of α2A-AR positive pixels in laminae I-II was automatically calculated by the ImageJ software. The size and number of α2A-AR positive neurons were also automatically quantified using the “Analyze Particles” function of ImageJ software.
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3

Fluorescent Imaging and 3D Reconstruction

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Fluorescent images were acquired with a Zeiss Axio Imager and a Zeiss Axio Observer Z1 equipped with an ApoTome slider for optical sectioning (Zeiss, Germany). Cleared and whole-mount stained specimen were imaged with a light sheet microscope (Lightsheet Z1, Zeiss, Germany) enabled for dual side illumination and equipped with a 20x detection objective suitable for clearing methods with refractive index of 1.38 (CLR Plan-Apochromat Corr nd = 1.38 VIS-IR, numerical aperture = 1.0, working distance = 5,6 mm). For image processing which consisted of dual side fusion, three-dimensional reconstruction and animation, as well as brightness and contrast adjustment, ZEN software (black edition, Zeiss, Germany) was used.
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4

Immunofluorescent Localization of 5-HT3AR

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HT-22 and SH-SY5Y cells were grown on 24-well plates, covered with 13-mm coverslips, and coated with poly-D-lysine (20 μg/mL in PBS-1x) and laminin (5 μg/mL in PBS-1x). After that, the cells were washed with PBS-1x and plated at a seeding density of 6500 cells/well. Then, cells were fixed with 4% paraformaldehyde at room temperature for 10 min and washed 3 × 5 min with 0.1% Triton X-100 in PBS-1x. Next, cells were blocked with donor horse serum 5% in PBST (PBS-Tween 20 0.1%), for 1 h, at room temperature. After that, the primary antibody rabbit polyclonal anti-5-HT3AR) was diluted in donor horse serum 5% in PBST and added to the cells in a ratio of 1:500, following an overnight period of incubation. Then, cells were washed with 0.1% Triton X-100 in PBS-1x (3 × 5 min) and incubated for 1 h at room temperature with the donkey anti-rabbit 488 secondary antibody (1:1000, diluted in donor horse serum 5% in PBST). Finally, cells were washed with 0.1% Triton X-100 in PBS-1x (3 × 5 min), incubated with DAPI (1:1000 in PBS-1x) for 10 min, and washed twice with PBS-1x. For mounting, ProLongTM gold antifade mountant was used on each slide. Images were acquired on ApoTome Slider (Zeiss®) fluorescence microscope coupled to the AxioVision Rel. 4.8. software (Zeiss®).
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5

Multimodal Imaging of Biological Samples

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Images of histological stainings and in situ hybridization were acquired with a slide scanner AxioScan Z1 (Zeiss, Jena, Germany). Fluorescent images of tissue sections were acquired with a Zeiss Axio Imager or Zeiss Axio Observer Z1 equipped with an ApoTome slider for optical sectioning (Zeiss, Jena, Germany). Cleared and whole-mount stained specimen were imaged in ScaleA2 with a light sheet microscope (Lightsheet Z1, Zeiss, Jena, Germany) enabled for dual side illumination and equipped with a 20× detection objective.
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