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17 protocols using as1004

1

Western Blot Analysis of Osteogenic Markers

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Lysis buffer (#AS1004, Aspen, South Africa) containing 1% protease inhibitor (#AS1008, Aspen) was used to lyse cells and tissue samples. Proteins were separated via SDS-PAGE, transferred to NC membranes (#IPVH00010, Millipore, USA), blocked with 5% nonfat milk, and stained overnight at 4°C with antibodies specific for ALP (1:1000, Sigma, USA,#ab95462), Osteocalcin (1:500, Sigma, USA, #ab93876), RunX2 (1:500, Sigma, USA, #ab23981), p53 (1:1,000, Sigma, USA, #SAB1302059), and GAPDH (1:10,000, Sigma, USA, #ab37168). Blots were then stained with appropriate horseradish peroxidase (HRP)-conjugated secondary antibodies (#AS1058, Aspen) and proteins were detected with a chemiluminescence detection system. Each experiment was independently repeated three times.
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2

Western Blot Analysis of Prostate Tissues

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Prostate tissues were lysed using RIPA buffer (AS1004; ASPEN) for 30 min. Proteins were resolved using an SDS-PAGE kit (AS1012; ASPEN) and transferred onto PVDF membranes (IPVH00010; Millipore). The membranes were blocked with 5% skimmed milk for 2 h to avoid nonspecific binding and then cultivated with primary antibodies against p-p38 (#4511, 1:500; Cell Signaling Technology, Danvers, MA, USA), p38 (#8690, 1:5,000; Cell Signaling Technology), p-p65 (#3033, 1:500; Cell Signaling Technology), p65 (#8242, 1:5,000; Cell Signaling Technology), or β-actin (TDY051, 1:10,000; Beijing Tad Biotech Co., Ltd., Beijing, China) at 4℃ overnight. After washing thrice with TBST, the membranes were incubated with secondary antibodies for 2 h. The protein signals were assessed using the electrochemiluminescence method (AS1059; ASPEN) following the manufacturer’s instructions, and the data were analyzed using ImageJ software version 1.8.0 (NIH, Bethesda, MD, USA).
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3

Protein Extraction and Western Blotting

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Total protein was extracted using RIPA kit (AS1004, ASPEN), and protease inhibitors (AS1008, ASPEN) were added during protein extraction to prevent protein degradation. After electrophoresis, coating and sealing, the indexes to be detected were incubated with primary antibody and secondary antibody, and finally immunolabeled with enhanced chemiluminescence reagent (AS1059, ASPEN). Antibodies against caspase-3 (#9662), caspase-12 (#9671), phosphorylated PERK (p-PERK, Thr980, #3179), PERK (#3192), phosphorylated eIF2α (p-eIF2α, Ser51, #3597), eIF2α (#2103), GRP78 (#3183), CHOP (#2895), and HO-1 (#43966) were obtained from cell signing technology corporation (Massachusetts, USA). Anti-β-tubulin (#ab6046), anti-β-actin (#ab8226), and anti-Nrf-2 (#ab137550) were purchased from Abcam (Cambridge, USA). Antihistone H3 (EM1108) was purchased from ELK Biotechnology (Wuhan, China).
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4

Western Blot Analysis of Ovarian Tissue

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Western blot analysis was performed according to a previously described method.32 (link) The total protein was extracted from ovarian tissue using radioimmunoprecipitation assay buffer (ASPEN, AS1004, Wuhan, Hubei, People’s Republic of China), and the protein lysate was separated on 10% polyacrylamide gels and then transferred to polyvinylidene difluoride (PVDF) membranes. Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) was used as an internal loading control. The blots were visualized with enhanced chemiluminescence (ECL) reagents. The quantitative analysis of each band was performed using ImageJ software (National Institutes of Health, Bethesda, MD, USA). Each experiment was repeated three times and the results were expressed as the average ± standard deviation (SD).
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5

Western Blot Analysis of Cell Signaling

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We lysed tissue or cells on ice using 1% protease suppressor (AD1008; Aspen, South Africa) and lysis buffer (AS1004; Aspen, South Africa). We collected and separated the protein fractions via SDS-PAGE and then embedded onto the nitrocellulose membrane (IPVH00010; Millipore, USA). After that, we blocked the membrane using 5% skimmed milk, and then primary antibodies were conjugated at 4°C overnight and then detected using horseradish peroxidase (HRP)-conjugated secondary antibodies (AS1058; Aspen, South Africa). For protein visualization, we utilized the chemiluminescence detection system (LiDE110; Canon, Japan), per the procedure outlined by the manufacturer. The antibodies used in this study consisted of anti-Runx2 (1:1,000), anti-BMP-2 (1:500), anti-caspase-3 (1:500), anti-caspase-7 (1:500), anti-caspase-9 (1:500), anti-caspase-12 (1:500), anti-Sox9 (1:500), anti-ATF6 (1:500), anti-CHOP (1:1000), anti-XBP1 (1:500), anti-GRP78 (1:1,000), and anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1:10,000), all bought from Abcam, USA.
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6

Protein Expression Analysis in GIST Cells

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GIST-T1 and GIST-T1 IR cell proteins were extracted using radioimmunoprecipitation assay buffer (AS1004; ASPEN) and evaluated using a bicinchoninic acid assay kit (AS1086; ASPEN). Average protein concentrations were separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transferred to a polyvinylidene fluoride membrane. Then, the membrane was blocked in 5% skim milk for 2 h at room temperature and incubated in specific antibodies against glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (ab181602, 1:10,000 dilution; Abcam), ANO6 (20784-1-AP, 1:1,000 dilution; Wuhan Sanying Biotechnology), Bax (50599-2-Ig, 1:2,000 dilution; Wuhan Sanying Biotechnology), Bcl-2 (ab321124, 1:1,000 dilution; Abcam), SLC7A11 (26864-4-AP, 1:1,000 dilution; Wuhan Sanying Biotechnology), SLC3A2 (15193-1-AP, 1:5,000 dilution; Wuhan Sanying Biotechnology), GSDMD-N (A22523, 1:1,000 dilution; abclonal), or cleaved-Caspase1 (AF4005, 1:500 dilution; affbiotech) overnight at 4°C. Membranes were then incubated with secondary antibodies (AS1107, 1:10,000 dilution; ASPEN) for 1 h. Finally, signals were developed using electrochemiluminescence detection system reagents (AS1059; ASPEN) according to the manufacturer’s instructions.
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7

Protein Expression Analysis of dMSCs

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The dMSCs were lysed using RIPA buffer (AS1004; ASPEN) for 30 min on ice. Proteins were resolved using an SDS-PAGE kit (AS1012; ASPEN) and transferred onto PVDF membranes. Then, the membranes were blocked in 5% skim milk for 2 h at room temperature and incubated in specific antibodies against GAPDH (ab181602; 1:10000 dilution; Abcam, Cambridge, MA, USA), PPP2R2A (16569-1-AP; 1:1000 dilution; Wuhan Sanying Biotechnology, Wuhan, China), Bax (60178-1-Ig; 1:1000 dilution; Wuhan Sanying Biotechnology), Bcl-2 (50599-2-Ig; 1:1000 dilution; Wuhan Sanying Biotechnology), p-PI3K (ab182651; 1:500 dilution; Abcam), PI3K (ab191606; 1:1000 dilution; Abcam), p-AKT (#4060; 1:1000 dilution; CST, Danvers, MA, USA), or AKT (#4691; 1:3000 dilution; CST) overnight at 4 ℃. Then, the membranes were incubated with secondary antibodies for 1 h. Finally, signals were developed using ECL detection reagents (Pierce Biotechnology), according to the manufacturer’s instructions.
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8

Apoptosis and Cell Cycle Regulation

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Tissues or cells were lysed via a lysis buffer (#AS1004, Aspen, South Africa) with 1% protease inhibitor (#AS1008, Aspen, South Africa) on ice. First, the protein fractions were collected, after which SDS-PAGE separation was carried out, followed by transfer onto a NC membrane (#IPVH00010, Millipore, USA). And then membranes were blocked by using 5% skim milk and probed at 4°C overnight, followed by HRP-conjugated secondary antibodies (#AS1058, Aspen, South Africa). Protein was visualized using a chemiluminescence detection system (#LiDE110, Canon, Japan). Antibodies were as follows: anti-Bcl-2 (#MAB-8272, 1: 500, R&D System, USA), anti-Bax (#AF820, 1: 1000, R&D System, USA), anti-cyclin D1 (#AF4196, 1: 500, R&D System, USA), and anti-cyclin D3 (#MAB6570, 1: 500, R&D System, USA). All experiments were conducted in triplicate.
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9

Autophagy Marker Evaluation in HepG2 Cells

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Following transfection for 48 h, total proteins from HepG2 cells and HepG2.2.15 cells were extracted using RIPA buffer (AS1004; ASPEN) and evaluated using the BCA protein assay kit (AS1086; ASPEN). Next, the proteins were separated using SDSPAGE and transferred onto PVDF membranes (IPVH00010; Millipore, Burlington, MA, USA). After blocking with 5% skim milk in PBST for 1.5 h, the membranes were incubated with primary antibodies against beclin-1 (cat. no. #3738; 1:2000 dilution; Cell Signaling Technology, Danvers, MA, USA), p62 (cat. no. ab109012; 1:2000 dilution; Abcam), and LC3I/II (cat. no. #4108; 1: 1000 dilution; Cell Signaling Technology), ATG7 (cat. no. ab133528; 1:1000 dilution; Abcam), or β-actin (cat. No. TDY051; 1:10000 dilution; Beijing TDY Biotech Co., Ltd., Beijing, China) overnight at 4˚C. The membranes were then washed and incubated with a secondary antibody for 1 h. Finally, the target protein bands were examined using an ECL detection system reagent (ASPEN, AS1059) according to the manufacturer’s protocol.
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10

Protein Analysis of Ischemic Myocardium

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Fifty μg of protein was extracted from the ischemic myocardial tissues at 4 weeks after MI. The tissues were lysed in radioimmunoprecipitation assay (AS1004, Aspen, Wuhan, China), and lysis buffer and protein concentrations were determined using the BCA kit (AS1086, Aspen). The proteins were used for sodium dodecyl sulfate-polyacrylamide gel electrophoresis and then transferred to nitrocellulose membranes. The membranes were blocked by incubation with 5% bovine serum albumin in a TBS-Tween buffer (10 mM Tris-HCl, 150 mM NaCl, and 0.5% Tween-20) for 1 hour at room temperature, and subsequently, incubated with different primary antibodies: rabbit anti-TH (Santa, Shanghai, China), anti-GAP43 (1:1,000; Abcam, Cambridge, UK), anti-NGF (1:500; Abcam), anti-CHAT (1:500; Bioss, Beijing, China), anti-VACHT (1:500; Abcam), or anti-GAPDH (1:10,000; Abcam) overnight at 4°C. After the membrane was washed three times, the blots were incubated with secondary HRP conjugated goat anti-rabbit antibody (1:10,000; Pierce, Rockford, IL, USA) for 30 minutes at room temperature. Membranes were detected by enhanced chemiluminescence (Beyotime Biotechnology, Jiangsu, China) and exposed to film in the dark. The optical density intensity of each band was measured using AlphaEaseFC software (Alpha Innotech Corp., San Leandro, CA, USA). Results are shown as the optical density ratio to GAPDH.
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