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6 protocols using fitc conjugated annexin 5

1

Apoptosis Induction Assessment

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Exponentially growing cells were seeded in 25 cm2 flasks and, 24 h later, they were exposed to different concentrations of ACY1215, AZD6244, paclitaxel or to the double (ACY1215, AZD6244) and triple (ACY1215, AZD6244, paclitaxel) combination of drugs for 48 h. For the double combination a 24 h pre-incubation with ACY1215 followed by a 24 co-incubation of ACY1215 and AZD6244 was also tested. At the end of treatment, floating and adherent cells were harvested for detection of apoptotic cells by Annexin V-binding assay (Immunostep, Salamanca, Spain). Cells were washed with cold PBS and re-suspended in binding buffer (10 mM HEPES-NaOH, pH 7.4, 2.5 mM CaCl2, and 140 mM NaCl, Immunostep). A fraction of 105 cells was incubated in binding buffer at room temperature in the dark for 15 min with 5 μL of FITC-conjugated Annexin V and 10 μL of 2.5 μg/mL propidium iodide (Immunostep). Annexin V binding was detected by flow cytometry. At least 104 events/sample were acquired and analyzed using specific software (CellQuestPro, Becton Dickinson).
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2

Apoptosis Evaluation by Annexin V Assay

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Apoptosis was evaluated by Annexin V-binding assay (Immunostep, Salamanca, Spain) in cells treated for 48 h with PLX4032, alone or in combination with orlistat or U18666 A, according to a simultaneous schedule. At the end of treatment, floating and adherent cells were harvested, washed with cold PBS and re-suspended in binding buffer (10 mM HEPES-NaOH, pH 7.4, 2.5 mM CaCl2, and 140 mM NaCl, Immunostep). A fraction of 105 cells was incubated in binding buffer at room temperature in the dark for 15 min with 5 μL of FITC-conjugated Annexin V and 10 μL of 2.5 μg/mL propidium iodide (Immunostep, Salamanca, Spain). Annexin V binding was detected by flow cytometry. At least 104 events/samples were acquired and analyzed using a specific software (CellQuestPro, BD Biosciences, Franklin Lakes, NJ, USA). The activation of caspase 8 and 3/7 was determined using luminescent Caspase Glo 8 and 3/7 assays (Promega, Fitchburg, WI, USA). Cells were seeded (8 × 103 cells/well) in 96-well plates and treated with drugs for 72 h. Caspase activation was detected according to manufacturer’s instructions.
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3

Apoptosis Induction by Cisplatin

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Apoptosis was evaluated by Annexin V-binding assay (Annexin V-FITC kit, Immunostep, Salamanca, Spain) 24 h after seeding in untransfected cells, and cells transfected with siRNA or negative control oligonucleotides, treated for 72 h with cisplatin. After washing with cold PBS and resuspension in binding buffer (10 mM Hepes-NaOH, pH 7.4, 2.5 mM CaCl2, and 140 mM NaCl, Immunostep), 105 cells were incubated in binding buffer at room temperature in the dark for 15 min with 5 µl of FITC-conjugated Annexin V and 10 μl propidium iodide (Immunostep). Flow cytometry (BD Accuri, Becton Dickinson) was used for Annexin V binding detection, by acquiring 104 events/sample. Data were analyzed using the Cell- QuestPro software (Becton Dickinson). The activation of caspases was determined using luminescent Caspase Glo 3/7 and Caspase Glo 8 assays (Promega, Fitchburg, WI, United States). Cells were seeded (8 × 103 cells/well) in 96-well plates and treated with cisplatin for 48 h. Caspase activation was detected according to manufacturer’s instructions.
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4

Cell Death Profiling by Flow Cytometry

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For cell death profiling, cells were treated with the indicated OR141 concentrations, trypsinized and washed with PBS. Cells were consecutively incubated with fluorescein isothiocyanate (FITC)-conjugated Annexin V (Immunostep, Salamanca, Spain, ANXVF-200T) and 1 μg/mL propidium iodide (PI, Sigma-Aldrich, St. Louis, MO, USA), according to manufacturer’s instructions. After 15 min incubation at room temperature in the dark, cells were analyzed by flow cytometry on FACSCanto II (BD Pharm) with a gating strategy, excluding debris and doublet cells. For calreticulin translocation, cells were treated as described above and gently scraped off the plate after 6 h. After staining with an anti-calreticulin antibody (Abcam, Cambridge, UK, ab22683), a secondary goat anti-mouse APC-coupled antibody was added for 15 min at RT. Cells were then counterstained with PI and analyzed on FACSCanto II.
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5

Endothelial Cell Phenotyping Protocol

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PE-conjugated anti-CD31 was from eBioscience (San Diego, CA, USA). APC-conjugated anti-CD42b was purchased from BD Bioscience (Erembodegem, Belgium). FITC-conjugated anti-CD62E (E-Selectin) was obtained from Santa Cruz Biotech (Santa Cruz, CA, USA). FITC-conjugated Annexin V was from ImmunoStep (Salamanca, Spain). Recombinant fibronectin, thrombin and other chemicals were provided by Sigma-Aldrich (St Louis, MO, USA).
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6

Annexin V Apoptosis Assay in Glioma Cells

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Apoptosis was evaluated by the Annexin V-binding assay (Immunostep, Salamanca, Spain) in glioma cells treated for 24 h with perampanel and harvested at the end of treatment or 24 h later. Cells were resuspended in binding buffer (10 mM HEPES-NaOH, pH 7.4, 2.5 mM CaCl2, and 140 mM NaCl, Immunostep, Salamanca, Spain). A fraction of 105 cells were incubated in binding buffer at room temperature in the dark for 15 min with 5 µL of FITC-conjugated Annexin V and 10 μL of 2.5 μg/mL propidium iodide (Immunostep, Salamanca, Spain). Annexin V binding and propidium iodide (PI) staining were detected by flow cytometry (BD Accuri C6, Becton Dickinson, Milan, Italy). At least 104 events/sample were acquired and analyzed using the instrument software.
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