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Fmk006

Manufactured by R&D Systems

The FMK006 is a laboratory instrument designed for the analysis of fluid samples. It is capable of measuring various parameters such as viscosity, density, and flow rate. The FMK006 is suitable for use in research and development settings, as well as in quality control applications.

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3 protocols using fmk006

1

Inhibition of Caspases and Notch Signaling in Sindbis Virus Infected OTSCs

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After the Sindbis virus injection expressing control tdTomato or C99ΔC with tdTomato as bicistronic constructs, the slices were incubated for 24 hr without changing media. At 12 or 18 hours after viral infection, GSI or caspase inhibitors were added to the OTSCs: 10 μM DAPT (565770, EMD Biosciences), 10 μM zVAD (FMK001, pan-caspase inhibitor, R&D Systems), 10 μM zDEVD (FMK004, caspase-3 inhibitor, R&D Systems), 10 μM zYVAD (FMK005, caspase-4 inhibitor, R&D Systems), 10 μM zVEID (FMK006, caspase-6 inhibitor, R&D Systems), and 10 μM zIETD (FMK007, caspase-8 inhibitor, R&D Systems). A drug concentration of 10uM for caspase inhibitors was selected based on the prior determination that was no observable toxicity in dendritic spine density when given to control cultures and this concentration is at or above the Ki of all the inhibitors (data not shown).
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2

HGPS Fibroblast Culture and Drug Treatments

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Human dermal fibroblasts (fibroblasts established from a skin biopsy) from five control subjects and five patients who carried the HGPS p.Gly608Gly mutation were obtained from the Coriell Cell Repository. Cells were cultured in Dulbecco's modified Eagle's medium (Life Technologies) supplemented with 15% fetal bovine serum (Life Technologies), 2 mM l‐glutamine (Life Technologies), and 1× penicillin–streptomycin (Life Technologies) at 37°C in a humidified atmosphere containing 5% CO2. Testing for mycoplasma contamination was performed regularly. Fibroblasts were cultured in the presence or absence of MG132 (474790, Merck Chemical LTD), MG115 (SCP0005, Sigma), MG262 (I‐120‐200, R&D Systems), bortezomib (S1013, Euromedex), carfilzomib (S2853, Euromedex), chloroquine diphosphate crystalline (C6628, Sigma), bafilomycin A1 (B1793, Sigma), caspase‐6 inhibitor Z‐VEID‐FMK (FMK006, R&D Systems), pan‐caspase inhibitor Z‐VAD‐FMK (FMK001, R&D Systems), leptomycin B (L2913, Sigma), 2‐D08 (SML1052, Sigma), and ginkgolic acid C15:1 (74741, Sigma). The experiments were performed on fibroblasts of HGPS patients and healthy subjects matched for age and passage.
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3

Caspase Inhibition in Differentiated Cells

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After 21 days, differentiated cells were used for caspase inhibition. The cells were seeded at a density of 5000 cells per cm2 and cultured for 6 days (as reported previously4 (link)) in the presence of caspase inhibitors: general caspase inhibitor Z-VAD-FMK and inhibitors for individual apoptotic caspases (Caspase-2,-3,-6,-8,-9). Pharmacological inhibitors (FMK001, FMK003, FMK004, FMK006, FMK007, and FMK008, R&D Systems) were added to the culture medium at a concentration of 100 μM, according to the manufacturer’s instructions and previous studies4 (link). Controls were generated using DMSO as an inhibitor vehicle at the same concentration. The medium with different treatments was changed every 2 days. The effectiveness of the individual caspase inhibitors was verified with Caspase-Glo assays (Supplement 2), and the constant inhibition effect of the FMK inhibitors in cells was confirmed previously38 (link)
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