The largest database of trusted experimental protocols

15 protocols using ab109131

1

Quantifying ACE2, TMPRSS2 Protein Levels

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein from 5 × 105 cells was harvested by directly lysing cells in 2x Laemmli Sample Buffer (BioRad Laboratories, Hercules, CA, USA) +/- 5% 2-mercaptoethanol. Lysed cells were boiled for 5 min at 95 °C and spun at maximum speed to pellet insoluble debris. Supernatants were run on 7% or 10% SDS-PAGE Mini-Protean TGX gels (BioRad) at 200 V for 30-45 min. Proteins were transferred to 0.22 μm nitrocellulose membrane (ThermoFisher). Membranes were blocked with 5% milk, immunoblotted with 1:1000 dilution of primary antibody, washed, incubated with 1:2500 dilution of hrp conjugated secondary antibodies, washed, and developed using SuperSignal Picoluminescent substrate (ThermoFisher) and a BioRad ChemiDoc Touch. Primary antibodies used were goat anti-hACE2 (R&D AF933); rabbit anti-TMPRSS2 (Abcam ab109131, Cambridge, UK); mouse anti-GAPDH (ThermoFisher AM4300).
+ Open protocol
+ Expand
2

TMPRSS2 and Androgen Receptor Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
Calu-3 (5 × 105 cells) were seeded in 6-well plates and incubated for 24 h for adhesion. After treatments, cells were lysed in RIPA buffer. Protein samples were then denaturated at 95 °C and migrated on 10% acrylamide/bisacrylamide gel. After transfer on a PVDF membrane (ThermoFisher Scientific), blocking was performed in 5% nonfat dry milk for 1 h. Membranes were then incubated overnight at 4 °C, with primary antibodies directed against the following proteins: TMPRSS2 (ab109131, 1/1000, Abcam, Cambridge, UK), TMPRSS2 Nt (ab92323,1/1000, Abcam, Cambridge, UK), AR (sc-816, 1/1000, Santa-cruz, CA, USA), GAPDH (ab8245, Abcam, Cambridge, UK) and β-actin (ab8226, 1/1000, Abcam, Cambridge, UK). Membranes were washed in TBS-tween before incubation with the corresponding HRP-conjugated secondary antibody for 1 h. Immune complexes were detected by chemiluminescence detection with Pierce ECL Western blotting substrate (ThermoFischer Scientific, Waltham, MA, USA) using G:BOX systems (Syngene). The quantification was carried out with the software ImageJ.
+ Open protocol
+ Expand
3

Protein Expression Analysis in Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissue or cell extracts were prepared in RIPA lysis buffer (89900, Thermo Fisher Scientific) supplemented with protease and phosphatase inhibitor (A32961, Thermo Fisher Scientific). Lysates were cleared by centrifugation. Supernatant proteins were mixed with LDS Sample Buffer (NP0007, Thermo Fisher Scientific), separated by SDS-PAGE and transferred to nitrocellulose membranes (1704270, BioRad, Hercules, CA, USA). Membranes were probed with the following primary antibodies: anti-SMYD2 (sc-393827, Santa Cruz Biotechnology, Dallas, TX, USA), anti-TMPRSS2 (ab109131, Abcam, Cambridge, UK), and HRP-linked β-actin (ab49900, Abcam).
+ Open protocol
+ Expand
4

TMPRSS2 Expression in Lung Cancer

Check if the same lab product or an alternative is used in the 5 most similar protocols
Two lung cancer tissue microarrays were purchased from Superbiotek (Shanghai, PRC), containing 63 and 78 paired tumors and adjacent normal tissues from LUAD (LUC1601) and LUSC (LUC1602) patients, respectively. A summary of the clinical pathological information including subtype, tumor/nodal stage, histological grade, and information about patient follow-up. The tissue sections were stained with an anti-TMPRSS2 antibody (ab109131, ABCAM, United States) (dilution: 1: 1000). Following the general standard IHC staining methods, TMAs sections were used to measure the TMPRSS2 protein levels. The staining results were quantified according to the following criteria: for staining degree: 1, weak; 2, intermediate; 3, strong; For the proportion of positive cells: 1, 0–25%; 2, 26–50%; 3, 51–75%; 4, >75%. The staining score was obtained by multiplying staining degree by the proportion, 0–5 was considered low expression, and >5 was high expression.
+ Open protocol
+ Expand
5

Immunohistochemical Analysis of ACE2 and TMPRSS2 in NAFLD

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunohistochemistry was performed on biopsies obtained from 6 NAFLD patients for which formalin-fixed liver sections were available, using the rabbit anti-human ACE2 (ab108252) and rabbit anti-human TMPRSS2 (ab109131, Abcam, Cambridge, UK), both diluted at 1:6400 according to the manufacturer’s instructions, and developed using DAB (3,3′-Diaminobenzidine, Vector Labs) as chromogen as previously described [22 (link)]. Histological images were taken using the BX41 microscope (Olympus), coupled with Leica LAS X Life Science software.
+ Open protocol
+ Expand
6

Antibody Detection for SARS-CoV-2 Targets

Check if the same lab product or an alternative is used in the 5 most similar protocols
Anti-ACE2 were purchased from Abcam (ab108209), Anti-CTSL were purchased from R&D(AF952-SP), Anti-β-actin were purchased from sigma(A5316), Anti-TMPRSS2 were purchased from Abcam (ab109131).
+ Open protocol
+ Expand
7

Cell Culture and Viral Infection Protocols

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human embryonic kidney 293T cells (HEK293T), African green monkey kidney cells Vero E6 and Vero 76 cells, murine macrophage RAW264.7, and murine fibroblast NIH3T3 cells were maintained at 37 °C in Dulbecco modified Eagle medium (DMEM; Gibco) supplemented with 10% fetal calf serum (FCS; Gibco), 1% GlutaMAX (Gibco), and 1% sodium pyruvate (100 mM; Gibco). A. albopictus C6/36 cells were grown at 28 °C in Royal Park Memorial Institute (RPMI) medium (Gibco, USA), 10% FCS (Gibco), and 1% GlutaMAX (200 mM; Gibco). Following viral infections, cells were maintained in corresponding media with 2% FCS and 10,000 U/mL of penicillin and 10,000 μg/mL of streptomycin (Gibco, USA).
Vero E6-TMPRSS2 cells were generated by transduction with lentivirus containing puromycin-selectable codon-optimized human TMPRSS2 construct and validated with anti-TMPRSS2 antibody (Abcam, ab109131) (full details are available in Supplementary Note 1). HEK293T-hACE2 cells were provided by Jesse Bloom (Fred Hutchinson Cancer Research Centre, Washington, USA)18 .
+ Open protocol
+ Expand
8

Western Blot for ACE2, TMPRSS2, and GAPDH

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibodies against ACE2 (ab15348), TMPRSS2 (ab109131), and GAPDH (ab8245) were obtained from Abcam (Cambridge, UK). Western blot samples were prepared as described previously [66 (link)]. Proteins on nitrocellulose membranes were visualized with the biotin/streptavidin-horseradish peroxidase system (GE Healthcare; Little Chalfont, UK) in combination with the “Renaissance Western Blot Chemoluminescence Reagent” (Perkin Elmer; Waltham, MA, USA). Documentation was performed using the digital system ChemoStar Imager (INTAS, Göttingen, Germany).
+ Open protocol
+ Expand
9

Immunohistochemical detection of ACE2 and TMPRSS2

Check if the same lab product or an alternative is used in the 5 most similar protocols
All paraffin wax blocks were cut at 4 μm and the neighboring sections were used. Slides were dewaxed and re-hydrated with xylene and different concentration of ethanol. Slides were immersed in sodium citrate buffer (pH 6.0) and boiled for 10 min in a microwave oven. After treatment with 3% hydrogen peroxide for 10 min, sections were blocked with 1% milk and reacted with first antibodies against ACE2 (tcna2043, 1:800 dilution; Taiclone, Taiwan) and TMPRSS2 (ab109131, 1:500 dilution; Abcam, USA) for overnight at 4 °C. After washes, sections were subsequently incubated with biotinylated secondary antibodies (K4065; Dako, USA) for 1 h at room temperature. Slides were stained using 3,3′-diaminobenzidine chromogen (DAB) solution and counterstained with haematoxylin, followed by mounting. We photographed all of the lung tissues in the slides by microscopy (Nikon, USA). About 4–6 measurements of 40X magnification for each subject sample (n = 4 per group) were analyzed by image-analysis system (Image Pro-Plus, Media Cybernetics, USA). The labeled images were based on RGB 8-bit resolution per channel parameters. The segmented areas in the images were filtered to count stained area. Mean density and area thresholds were automatically defined based in the assessed images. After application, the area labeled and their counting per image was obtained [21 ].
+ Open protocol
+ Expand
10

Quantifying SARS-CoV-2 Protein Localization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Severe acute respiratory syndrome coronavirus 2 nucleoprotein was co-stained with ACE2 and TMPRSS2, respectively. Anti-SARS-CoV-2 nucleoprotein antibody (Cat No. 40143-T62; Sino Biological), anti-TMPRSS2 antibody (ab109131; Abcam), and anti-ACE2 antibody (ab108252; Abcam) were used in this assay.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!