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12 protocols using cellmatrix type 1 p

1

MDCK Cell Monolayer Formation on Collagen Gel

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MDCK cells were purchased from Riken Cell Bank and cultured in Dulbecco's modified Eagle's medium (DMEM; Sigma, St. Louis, MO) containing 1% antibiotic/antimycotic solution (Sigma) and 10% fetal bovine serum (FBS; Equitech-Bio, Inc., Kerrville, TX). Cells were maintained in a humidified incubator at 37°C and 5% CO2. For time-lapse imaging, immunofluorescence staining, and live cell imaging, we prepared a 1.6 mg/ml collagen type I gel with Cellmatrix type I-P (Nitta Gelatin Inc., Osaka, Japan). To form a circular monolayer colony, a hand-made plastic ring (diameter, 5 mm) was placed on a collagen gel. The cell suspension obtained after trypsinization was dropped within the ring and incubated for 6 h. The ring was removed, and unattached cells were washed away (Supplementary Fig. 8a). After 2–3 days, several leader cells were observed in each dish.
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2

Anti-Tumor Effect of TPX2 siRNA in Nude Mice

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All animal experiments were conducted in compliance with the guidelines of the Institute for Laboratory Animal Research, Nagoya University Graduate School of Medicine. The mice were kept in a temperature- and humidity-controlled environment under a 12 h light–dark cycle and had free access to water and food at all times. Male BALB/c nude mice (8 weeks old and weighing 20–25 g) were purchased from SLC Japan (Nagoya, Japan). KLM1 cells (1 × 107) were inoculated into the femoral area of each mouse 10 (link). After 5 days, the mice were randomly divided into three groups and were treated either with phosphate-buffered saline (PBS), Control siRNA, or TPX2 siRNA; each treatment group consisted of five mice. Fifty microliters of PBS, Control siRNA (50 μmol/L), or TPX2 siRNA (50 μmol/L) was dissolved in 50 μL of Cellmatrix Type I-P (Nitta Gelatin Inc., Osaka, Japan) and was administered directly into the tumor twice a week for 3 weeks. Tumor growth was assessed by measuring the volume (in mm3). The volume was calculated as the following equation; (L×W2)/2, where L is the tumor length (in mm) and W is the tumor width (in mm) 11 (link),12 (link). After the treatment, the mice were checked for metastatic or disseminated lesions in the thoracic and peritoneal cavity.
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3

Collagen Overlay Assay for Cell Culture

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A 1.6 mg/ml collagen type I gel (Cellmatrix type I-P; Nitta Gelatin, Osaka, Japan) was used for the collagen overlay assay (Ishida et al., 2014 (link)). An 8.0-mm-radius glass dish was filled with 150 μl of the collagen gel, onto which trypsinized cells (2.0 × 103) were seeded. After culture for 3 or 5 d, a collagen gel solution (75 μl) was poured onto the cells, and the sample was incubated for 30 min at 37°C to induce gelation. The dish was then filled with culture medium. After 1 d, cells were fixed with 2% paraformaldehyde in PBS for 10 min, permeabilized with 0.5% Triton X-100 in PBS for 5 min, and blocked with 0.5% bovine serum albumin (Sigma-Aldrich) in PBS for 1 h. Samples were incubated with Alexa Fluor 555–phalloidin (1:300 dilution in PBS) overnight at room temperature. Fluorescence images were obtained using a confocal laser-scanning microscope (C1 confocal imaging system; Nikon) with a 60× objective.
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4

Collective and Solitary Cell Migration Assay

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To observe collective cell migration, 1 ml of 1.6 mg ml−l collagen (Cellmatrix Type I-P; Nitta Gelatin, Osaka, Japan) was gelatinized in a 35-mm dish. Then 2.5 × 104 MDCK cells were seeded in a 5-mm glass ring set on the center of the collagen gel sheet in the dish. After the cells were incubated overnight, the glass ring was removed. After culture for 4 h, the cells were subjected to time-lapse imaging under the LSM 710 confocal microscope (Carl Zeiss AG, Jena, Germany) fitted with an EC Plan N 10× objective lens (NA 0.3). A microscope stage incubator was used to keep the cells at 37°C and under 5% CO2 and high relative humidity. Images were obtained every 5 or 10 min for >5 h using the definite-focus function to maintain the focal plane on the cells during time-lapse imaging. To observe solitary cell migration, 1 × 104 MDCK cells were seeded on gelatinized collagen in a 35-mm dish. After incubation overnight, the cells were subjected to time-lapse imaging in the same manner as that for collective cell migration.
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5

Co-culture of Myoblasts and Embryonic Bodies

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The human myoblast cell line Hu5/E18 was cultured in collagen type I-coated 10-cm dishes (Iwaki, Japan) or Cellmatrix type I-P (Nitta gelatin, Japan) -coated dishes in myoblast medium containing DMEM, 20 % FBS, 2 mM L-glutamine, 0.5 % penicillin/streptomycin and 2 % Ultroser G serum substitute (Pall, France). For in vitro neuro-muscular co-culture, Hu5/E18 cells were plated at a density of 1×103 cells/ml on a Cellmatrix type I-P-coated micro cover glass (Matsunami, Japan) and cultured until the cells reached approximately 50 % confluence. Then, the medium was changed to MNM, and the cells were cultured for 4 additional days, until the formation of myotubes. Partially dissociated EBs derived from KhES1 cells were plated onto Hu5/E18-derived myotubes at a density of 2.5×102–5×103 cells/cm2 and co-cultured with the myotubes for 3–4 days in MNM.
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6

Neurite Outgrowth Evaluation in PC12 Cells

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The PC12 cells from the stock culture were suspended in the medium and plated at 4.0 × 103 cells/90 μL/well (for the evaluation in the presence of Bt2cAMP) or 2.0 × 103 cells/90 μL/well (for the evaluation in the presence of NGF) in 96-well plates (Thermo Fisher Scientific K.K., Tokyo, Japan) with Cell-matrix type I–P (collagen) (Nitta Gelatin Inc., Osaka, Japan) and incubated in a humidified atmosphere of 5% CO2 at 37 °C. After 24 h, 5 μL of Bt2cAMP at 10 mM (final concentration: 0.5 mM) or NGF at 200 ng/mL (final concentration: 10 ng/mL), and 5 μL of each sample or the medium only (control) were added to the culture medium (the final concentration of each sample is indicated in the figures). At 24 h after the addition of Bt2cAMP and the samples or at 48 h after the addition of NGF and the samples, the medium was aspirated, and the PC12 cells were fixed with a phosphate buffer (pH 7.2, 100 mM) containing 1% glutaraldehyde and stained with a Giemsa stain solution. Then the 96-well plates were washed twice with Milli-Q grade water. The number of cells bearing neurites longer than twice the diameter of one cell body after treatment was divided by the total number of cells, which was 300–400 cells per well.
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7

Cell Culture of HeLa, HEK293T, and Hu5/KD3

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HeLa (CCL-2, ATCC) and HEK293T (CRL-11268, ATCC) cells were cultured in high-glucose Dulbecco’s modified Eagle’s medium (D5796, Sigma) with 10% fetal bovine serum (Gibco) and 1% penicillin–streptomycin (Fujifilm Wako Pure Chemical Corporation) in a 5% CO2 humidified incubator at 37 °C.
Immortalized human myogenic cells (Hu5/KD3)57 (link),58 (link) were kindly provided by Dr. Naohiro Hashimoto (National Center for Geriatrics and Gerontology, Japan). Hu5/KD3 cells were cultured in primary myocyte growth medium (pmGM), which consists of high-glucose DMEM containing 20% FBS, 2% Ultroser G serum substitute (PALL), and 1% penicillin–streptomycin, in a 5% CO2 humidified incubator at 37 °C. Culture dishes were manually coated with collagen using Cellmatrix Type I-P (Nitta Gelatin).
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8

Collagen Gel Formation and Culture

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Eight volumes of type I collagen solution (Cell-matrix, Type I-P; Nitta Gelatin Inc.) were mixed with one volume each of 10× concentrated DMEM (Invitrogen), reconstitution buffer (260 mM NaHCO 3 in 100 mL of 50 mM NaOH and 200 mM HEPES; Nitta Gelatin Inc.) and kept on ice. This Type I-P collagen solution is used for making collagen gel (Haga et al., 2005; Nagai et al., 2007) . Aliquots (1.5 mL) of this reconstituted collagen solution were placed in the wells of 6-well culture plates (Corning), and immediately warmed to 37°C to allow gel formation. The gelformed plates were rinsed twice with sterile PBS and an appropriate volume of pre-warmed Neurobasal Medium was added. On day 25, cell aggregates were replaced onto collagen gel in 6-well culture plates. Percentage of number of human iPS cell-derived telencephalic neuron aggregates adhering to collagen gel was calculated from 25 aggregates.
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9

Polymeric Nanoparticle Fabrication for Drug Delivery

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Poly(lactic-co-glycolic acid) (PLGA, the lactic acid/glycolic acid molar ratio = 75/25, molecular weight = 20,000 Da), thrombin, and paclitaxel (PTX) were purchased from Wako Pure Chemicals Industries, Ltd., Osaka, Japan. Poly(vinyl alcohol) (PVA, degree of polymerization = 1000, degree of saponification = 86–90%) was kindly supplied from Japan Vam & Poval Co., Ltd., Osaka, Japan. Gelatins with isoelectric points of 5.0 (pI5) and 9.0 (pI9) and the weight-averaged molecular weight of 100,000 Da were kindly supplied from Nitta Gelatin Inc., Osaka, Japan. Cellmatrix® type I-P was purchased from Nitta Gelatin Inc., Osaka, Japan. Fibrinogen and adenosine 5′-diphosphate (ADP) were purchased from Sigma-Aldrich Inc., St. Louis, MO, USA. Bovine serum albumin (BSA) was purchased from Nacalai Tesque Inc., Kyoto, Japan. Coumarin-6 (CMR) was purchased from Tokyo Chemical Industry Co., Ltd., Tokyo, Japan. The reagents were used without further purification.
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10

Rapid Isolation of Primary Mouse Hepatocytes

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We performed a rapid two-step method61 (link) to isolate mouse primary hepatocytes. We anesthetized the mice with pentobarbital sodium (50 mg/kg body weight) and perfused their liver tissue with prewarmed Hank’s balanced salt solution supplemented with 0.5 mM ethylene glycol tetraaceticacid (EGTA) and 10 mM 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES) for 5 min, followed by digestion buffer (1000 mg/L of low-glucose Dulbecco’s modified Eagle’s medium [DMEM] supplemented with 0.8 mg/mL of collagenase type 1; Worthington Biochemical Corporation, Lakewood, NJ, USA). Next, we filtered single-cell suspensions through a 70-μm cell strainer (BD Falcon, Bedford, MA, USA) and centrifuged them at 50 × g for 1 min and collected the cell supernatants separately for the preparation of nonparenchymal cells, as described later. We washed the hepatocytes in the pellet twice, suspended them in 4500 mg/L of high-glucose DMEM supplemented with 1 μM insulin, 2 mM L-glutamine, 10 IU/mL of penicillin, 10 IU/mL of streptomycin, and 10% fetal bovine serum, and seeded them on 6-well plastic plates coated with collagen type I (Cellmatrix type I-P, Nitta Gelatin, Osaka, Japan) at a density of 300,000 cells/well. After 4 h incubation in a 5% CO2 incubator at 37 °C, we changed the culture medium to discard floating unattached cells, and the growth medium was changed daily.
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