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2 protocols using ha ubiquitin vinyl sulfone ha ub vs

1

Synthesis and Characterization of Organometallic Compounds

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NiPT, PtPT, PdPT, T-AuPT, Au(PPh3)PT, CuPT, and AgDT were synthesized in our laboratory and stored as a 10 mM stock solution in dimethyl sulfoxide (DMSO) at −20°C. Auranofin was purchased from Enzo Life Sciences International, Inc. (Plymouth Meeting, PA) and dissolved in DMSO as a 10 mM, stored at −20°C. Bortezomib (Cell Signaling Technology, Beverly, MA, USA) HA–ubiquitin–vinyl sulfone (HA-Ub-VS), and Ub-AMC (BostonBiochem, Cambridge, MA, USA). Antibodies were purchased from following sources: anti-AMPK, anti- phospho-AMPK, anti-mTOR, anti-phospho-mTOR, anti-P70S6K, anti-phospho-P70S6K, anti-S6, anti-phospho-S6, anti-ATF4, anti-CHOP, anti-phospho-eIF2a, anti-LC3, anti-USP14 (D8Q6S), and anti-PARP (Cell Signaling Technology, Beverly, MA, USA); anti-ubiquitin (P4D1) and anti-SQSTM1/P62(Santa Cruz Biotechnology, Santa Cruz, CA); anti-GAPDH and anti-HA-tag (Bioworld Technology, Nanjing, China); and anti-UCHL5 (Abcam, Cambridge, UK). Anti-phospho-USP14 and anti-phospho-UCHL5 were prepared by the Abgent, Inc. Bafilomycin, 3-MA, and E64D were purchased from Enzo Life Sciences (MA, USA). Lipofectamine 2000 (11668–027), goat anti-rabbit Alexa 488 (997773), and opti-MEM medium (22600050) were purchased from the InvitrogenTM.
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2

Biochemical Agents and Antibodies Used

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The agents used in this study were purchased from following sources: silver nitrate, copper nitrate, calcium nitrate, disulfiram (DSF), tetrathiomolybdate (TM), ethylenediaminetetraacetic acid (EDTA), desferrioxamine (DFO), N-acetyl-L-cysteine (NAC), catalase (CAT), N-ethylmaleimide (NEM) (Sigma-Aldrich, St. Louis, MO); bortezomib (Cell Signaling Technology, Beverly, MA, USA); b-AP15, Z-LLE-AMC, Boc-LRR-AMC, Suc-LLVY-AMC, purified human 20S proteasome, purified human 26S proteasome, HAubiquitin-vinyl sulfone (HA-Ub-VS), and Ub-AMC (BostonBiochem, Cambridge, MA, USA). Antibodies were purchased from following sources: anti-caspase 3/8/9, anti-cleaved caspase 3/8/9, anti-PARP, anti-K48linked polyubiquitin (D9D5), and anti-USP14 (D8Q6S) (Cell Signaling Technology, Beverly, MA, USA); antiubiquitin (P4D1) and anti-GFP (B-2) (Santa Cruz Biotechnology, Santa Cruz, CA); anti-GAPDH and anti-HAtag (Bioworld Technology, Nanjing, China); anti-UCHL5 (Abcam, Cambridge, UK).
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