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149 protocols using cobas e601 analyzer

1

Biomarker Measurement in Fasted Serum Samples

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Serum samples were drawn after patients fasted for at least 8 hours overnight, and then, the samples were stored at −20 °C; laboratory testing was completed within 2–4 hours. Serum FT4, TSH, TgAb, and TPOAb concentrations were measured by using a Roche electrochemiluminometric analyzer (Cobas-e601 analyzer, Roche, Mannheim, Germany). AMH levels were also measured by using an electrochemiluminometric analyzer (Cobas-e601 analyzer, Roche, Mannheim, Germany). AMH assays demonstrated stable intra-assay and interassay coefficients of variation of 4.9 and 7.0%, respectively.
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2

Biomarkers for Cardiac Arrest Prognosis

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Blood samples used for the measurement of PCT and S100B were collected at baseline (BL), 24, 48, and 72 hours after ROSC. Blood samples were allowed to clot for 30 minutes at 4°C and were centrifuged at 3000 rpm for 10 minutes at 4°C, and the supernatant was stored at −80°C until analysis.
PCT values were measured using an enzyme-linked fluorescent immunoassay (bioMerieux VIDAS B.R.A.H.M.S. PCT, France) on the Cobas e601 analyzer (Roche, Basel, Switzerland), and the detection limit was 0.05 ng/mL. The S100B levels were measured with the immunoluminometric assay method (Elecsys 2010, Roche Diagnostics, Mannheim, Germany) using the Cobas e601 analyzer, and the assay detection limit was 0.005 μg/L.
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3

Biomarker measurement in acute heart failure

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We measured the plasma concentration of the ABC-AF biomarkers (N-terminal pro-B-type natriuretic peptide (NT-proBNP), cardiac troponin-T (cTnT), and GDF-15). Plasma concentrations of GDF-15, NT-proBNP, and cTnT were measured centrally with the Elecsys GDF-15 commercial assay kit (Roche Diagnostics) [13 (link)]. All patients selected for the study were drawn venous blood within 48 hours of admission. The test was performed on the Roche analyzer Cobas e601 (Roche Diagnostics) system. The plasma GDF-15 (detection range: 0–0,000 pg/mL), NT-proBNP (detection range: 5–35,000 pg/mL), and high sensitively cTnT (cTnT, hs-cTnT) (detection range: 0.03–10.0 ng/mL) were performed on the Roche analyzer Cobas e601 (Roche Diagnostics) system.
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Vitamin D Biomarker Measurement Protocol

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25(OH)D was measured by the LiasonX chemiluminescence immunoassay, with an interassay coefficient of variation (CV) of 2.2% (Diasorin, Stillwater, MN). VDBP was available in 181 consecutively enrolled participants and measured by commercial enzyme-linked immunosorbent monoclonal assay (R&D Systems, Minneapolis, MN). The inter-assay and intra-assay CV for VDBP measurement was 5.1–7.4% and 5.7–6.2%, respectively. Albumin and alkaline phosphatase were measured on the Roche Cobas 6000 Analyzer (Roche Diagnostics, Indianapolis, IN). Ionized calcium and intact PTH were available in 106 consecutively enrolled participants. Ionized calcium levels were measured by the ABL837 calcium ion-selective electrode instrument (Radiometer, Westlake, OH). Intact PTH was measured by electrochemiluminescence immunoassay on the Roche Cobas e601 analyzer with an inter-assay CV of 3.7%.
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5

Glycemic Biomarkers Quantification

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The serum HbA1c level was determined by high-performance liquid chromatography using the Ark-8150 system (Arkray Inc. Kyoto, Japan). Fasting insulin and C-peptide levels were analyzed via immune chemiluminometric assays (Roche cobas E601 analyzer, Roche Diagnostics, USA). The intra- and inter-assay coefficients of variation were <5% and <10%, respectively.
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6

Biomarker Measurements in Cerebrospinal Fluid

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Participants underwent CSF collection as previously described (Fagan et al., 2006 (link)). Briefly, CSF was collected at 8 AM after overnight fasting in a polypropylene tube via gravity drip using an atraumatic Sprotte 22 gauge spinal needle. Samples were gently inverted and centrifuged at low speed to pellet any cellular debris. CSF was then aliquoted into 500 μL volumes in polypropylene tubes and stored at −80°C until the time of assay.
CSF Aβ42, t- tau, and ptau181 were measured with corresponding Elecsys immunoassays on the Roche cobas e601 analyzer (Schindler et al., 2018 (link)). Amyloid status was established per previously published cutoffs for CSF ptau181/Aβ42 (Schindler et al., 2018 (link)), with individuals with a CSF ptau181/Aβ42 ratio ≤0.0198 categorized as amyloid-negative and individuals with ptau181/Aβ42 > 0.0198 categorized as amyloid-positive.
CSF SNAP-25 and Ng were measured via the microparticle-based immunoassay, Single Molecule Counting Erenna system (EMD Millipore, Burlington MA) system, with antibodies developed in the laboratory of Dr. Jack Ladenson at Washington University. CSF NfL was measured with an immunoassay kit manufactured by Uman Diagnostics (UmanDiagnostics, Umeå, Sweden).
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7

Pubertal Development and Hormone Profiles

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Height and weight were used to calculate BMI (kg/m2), which was converted to BMIz scores for age and sex. Reproductive endocrine, metabolic, and physical status was measured by trained observers to identify the stage of puberty. In all 167 follow-ups, the pubertal status and sex hormone concentrations, including estradiol, progesterone, 17-hydroxyprogesterone, testosterone, DHEAS, and androstenedione, were assessed prior to MRI studies. Levels of 11-Desoxycortisol, Testosterone, Androstenedione, and 17-hydroxyprogesterone were analyzed using Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS). [ng/dL]. Progesterone serum levels were measured with mass spectrometry. [ng/mL]; estradiol, was measured by Electrochemiluminescence Immunoassay on Roche Cobas e601 analyzer. [pg/mL]; Dehydroepiandrosterone Sulfate was measured via Chemiluminescence immunoassay on Siemens Immulite 2000 XPi analyzer. [mcg/mL]. In addition, C-reactive protein (CRP) was evaluated before each imaging study. C-reactive protein high sensitivity was run on Roche Cobas 6000 Analyzer.
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8

Quantification of Tumor Markers in Breast Nipple Discharge

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All samples were collected before any treatment was initiated and within 2 days of hospitalization. The nipple was first cleansed with alcohol swabs to remove cellular debris. The nipple discharge and milk were expressed via manual compression of the breast. No complications occurred. Droplets of nipple discharge or milk were collected in an Eppendorf tube. The tube was then stored in a dedicated refrigerator at 4°C. The quantities of the collected nipple discharge varied from 20 μL to 200 μL. The samples were transported to the laboratory department within 8 hours of collection. Viscous samples were diluted up to 20-fold with normal saline prior to centrifugation and storage at 4°C. The concentrations of CEA, CA153 and CA125 in the nipple discharge and milk samples were quantitatively measured via an automated test system that utilized sandwich electro-chemiluminescence immunoassay (ECLIA) kits (Roche cobas e601 analyzer, Roche Diagnostics, Indianapolis, USA). All tumor marker assays were performed at Qilu Hospital of Shandong University according to manufacturer’s protocol. The laboratory personnel were blinded to the clinical information. Commercial reference control sera were used for quality control and calibration.
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9

Serum CEA Measurement Protocol

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Serum CEA were measured by chemiluminescent enzyme immune assay with Roche Cobas e601 Analyzer (Roche AG), and the limit of normality were defined as 5 ng/ml according to the manufacturer's instruction.
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10

Serum Lipid Profile and Insulin Resistance in Obese Children

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Following overnight fasting, blood samples were collected from obese children in the morning using venous puncture technique into Vacutainer® serum tubes with gel separator (BD Vacutainer, Plymouth, UK). The samples were then analyzed on the same day for serum lipid profile (total cholesterol [TC], high-density lipoprotein cholesterol [HDL-C], low-density lipoprotein cholesterol [LDL-C], and triglycerides [TG]), and plasma glucose by enzymatic methods using Roche Cobas c 501 analyzer (Roche Diagnostics, Indianapolis, IN, USA) and for insulin measurement by electrochemiluminescence immunoassay using Roche Cobas e 601 analyzer (Roche Diagnostics). Insulin resistance was assessed through the homeostasis model assessment-insulin resistance index (HOMA-IR). The status of insulin resistance was determined using different cut-off values for prepubertal (>2.5) and pubertal (>4) stages [15 (link)].
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