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Autopol 3 automatic polarimeter

Manufactured by Rudolph Research Analytical
Sourced in United States

The Autopol III is an automatic polarimeter designed for the measurement of optical rotation and specific rotation of liquids and solutions. It features an advanced optical system, automatic sample handling, and user-friendly software for data analysis and reporting.

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10 protocols using autopol 3 automatic polarimeter

1

Pleuromutilin Purification and Characterization

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Pleuromutilin (>90% pure) was purchased from Great Enjoyhood Biochemical Co. Ltd., (Daying, China). The aprotic solvent used in this experiment were purchased from TiTan Technology Co. Ltd., (Shanghai, China). The other analytical grade solvents were purchased from Guangzhou General Reagent Factory (Guangzhou, China). The target compounds were purified by silica gel column chromatography (200–300 mesh, Branch of Qingdao Haiyang Chemical Co. Ltd., Shandong, China). Melting Point Apparatus were purchased from Gongyi Yuhua Instrument Co., Ltd. The optical rotations were measured on an Autopol III automatic polarimeter (Rudolph Research analytical).
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2

Optical Rotation and NMR Spectroscopy Analysis

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An Autopol III automatic polarimeter (Rudolph Research Analytical, NJ, USA) was used to measure the optical rotations. A Bruker Av-400 NMR spectrometer (Bruker BioSpin, Switzerland) was used to record the NMR spectra, with tetramethylsilane (TMS) as an internal standard at room temperature. Column chromatography (CC) was carried out using RP-18 gel (ODS-AQ-HGGEL, AQG12S50, YMC, Co., Ltd., Kyoto, Japan), silica gel (200–300 mesh, Qingdao Marine Chemical Industrials, China) and Sephadex LH-20 (GE Healthcare, Inc., Uppsala, Sweden). Thin-layer chromatography (TLC) (Huanghai Marine Chemical, Ltd., Qingdao, China) was used to monitor the fractions. Agilent 1200 equipment with an Inert Sustain C18 column (5 μm particle size, 5 mm × 250 mm) was used to conduct HPLC analysis. Preparative HPLC was conducted on an NP7005C series instrument using a YMC-Pack ODS-A (10 × 250 mm).
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3

Analytical Techniques for Natural Product Characterization

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Optical rotations were measured on an Autopol III automatic polarimeter (Rudolph Research Analytical, Hackettstown, NJ, USA). UV spectra were collected on a Cary 300 spectrometer (VARIAN, Palo Alto, CA, USA). IR spectra were collected on a Nicolet Nexus 470 FT-IR spectrometer (Thermo Scientific, Waltham, MA, USA). CD spectra were collected on a J-810 spectropolarimeter (Jasco Corporation, Tokyo, Japan). 1H and 13C-NMR spectra were collected on a Bruker Avance-600 NMR spectrometer (Bruker Corporation, Billerica, MA, USA). HRESIMS spectra were collected on a Waters Xevo G2 Q-TOF spectrometer (Waters, Milford, MA, USA). HPLC analysis was performed on an Agilent 1260 series (Agilent Technologies, Santa Clara, CA, USA) with a C18 RP-column (Eclipse XDBC18, 150 × 4.6 mm, 5 μm, Agilent Technologies, Santa Clara, CA, USA). Semi-preparative HPLC was performed on a SSI 23201 system (Scientific Systems Inc., State College, PA, USA) with a YMC-Pack ODS-A column (250 × 10 mm, 5 μm, YMC CO., LTD. Shimogyo-ku, Kyoto, Japan). MPLC was performed on a LC3000 series (Beijing Tong Heng Innovation Technology, Beijing, China) with a ClaricepTM Flash i-series C18 cartridge (20–35 μm, 40 g, Bonna-Agela, Wilmington, DE, USA). Size exclusion chromatography was carried out using a Sephadex LH-20 (GE Healthcare, Chicago, IL, USA) column.
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4

Comprehensive Analytical Procedures for Compound Characterization

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Optical rotations were recorded on an Autopol III automatic polarimeter (Rudolph Research Analytical). UV and IR spectra were obtained on a Thermo Scientific Evolution-300 UV–visible spectrophotometer and a Bruker Tensor 27 FT-IR spectrometer with KBr pellets. ECD spectra were obtained on a Chirascan spectrometer. NMR spectra were obtained on Bruker Avance 800 MHz and Bruker Avance III 500 spectrometers with tetramethylsilane as an internal standard at room temperature. High-resolution (HR) ESIMS were recorded on a Thermo Fisher Scientific Q-TOF mass spectrometer. Electrospray ionization mass spectrometry ESIMS were recorded on a Thermo Fisher LTQ Fleet instrument spectrometer. Silica gel (300–400 mesh, Qingdao Marine Chemical Ltd., People’s Republic of China) and RP- 18 gel (20–45 μm, Fuji Silysia Chemical Ltd., Japan) were used for column chromatography (CC). Semipreparative HPLC was performed on a Waters 1525EF liquid chromatography system equipped with a Hypersil BDS C18 column (4.6 mm × 250 mm; 10.0 mm × 250 mm). Fractions were monitored by TLC. Compounds were visualized by heating Silica gel plates immersed in 10% H2SO4 in ethanol.
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5

Organic Synthesis and Purification Protocols

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Reagents and solvents were purchased from commercial suppliers and used as received unless otherwise noted. Dry solvent was obtained following the standard procedure. All reactions were performed under N2 atmosphere unless otherwise indicated. Analytical silica gel 60 F254-coated TLC plates were purchased from EMD Chemicals, Inc. and were visualized with UV light or by treatment with phosphomolybdic acid (PMA), Dragendorff’s reagent, or ninhydrin. Whatman Purasil 60A silica gel 230−400 mesh was used for flash column chromatographic purifications. Proton nuclear magnetic resonance (1H NMR) spectra were measured on Varian 400 and 600 MHz NMR spectrometer, using tetramethylsilane (TMS) as an internal standard. The NMR solvent used was either CDCl3 or CD3OD unless otherwise indicated. Optical rotations were recorded on Autopol III automatic polarimeter (Rudolph Research Analytical). Melting points were recorded using a MEL-TEMP II (Laboratory Devices Inc., U.S.) capillary melting point apparatus. Purity of the compounds was determined by elemental analysis and was within ±0.4% of the theoretical value (≥95% purity). Elemental analyses were performed by Atlantic Microlab, Inc., GA, USA. Selected compounds were furher analyzed by reverse phase HPLC (Waters 2489 Alliance Integrated System, USA) to check for purity.
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6

Analytical Characterization of Compounds

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Nuclear magnetic resonance (NMR) spectra were recorded on a Bruker Avance III 400 and 600 MHz NMR spectrometer (Bruker, Rheinstetten, Germany) in CDCl3 and acetone-d6 with TMS as an internal standard at room temperature. Ultraviolet (UV) spectra were recorded on a Hitachi U-3000 spectrophotometer (Hitachi, Tokyo, Japan). Optical rotations were measured in MeOH solution on a Rudolph Autopol III automatic polarimeter (Rudolph Research Analytical, NJ, USA). High-resolution-electrospray ionization-mass spectrometry (HR-ESI-MS) spectra were obtained on an Agilent 6210 TOF LC-MS spectrometer (Agilent, CA, USA). X-ray data were obtained on a Bruker APEX-II CCD diffractometer (Bruker, MA, USA). Column chromatography was performed on silica gel (200−300 mesh, Qingdao Marine Chemical Inc., Qingdao, China) and Sephadex LH-20 (Pharmacia Biotech, Uppsala, Sweden). High-performance liquid chromatography (HPLC) was performed on a Shimadzu LC-20AT instrument with an SPD-20A detector (Agilent, CA, USA) using an ODS column (ODS-2 HYPERSIL, 250 × 10 mm, 5 μm, Thermo Scientific, Shanghai, China). All chemicals used in this study were of analytical or HPLC grade.
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7

Characterization of Organic Compounds

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All chemical reagents were purchased and utilized without further purification. Solvents were used directly or treated with standard methods before use. Melting points (mp) were determined on a XT-4 digital melting point apparatus (Beijing Tech Instrument Co., Ltd., Beijing, China) and were uncorrected. Infrared spectra (IR) were recorded on a Bruker TENSOR 27 spectrometer. Optical rotation was measured on a Rudolph Research Analytical Autopol III automatic polarimeter. Proton nuclear magnetic resonance spectra (1H NMR) and carbon nuclear magnetic resonance spectra (13C NMR) were recorded in CDCl3 on a Bruker Avance 400 or 500 MHz instrument, and tetramethylsilane (TMS) was used as the internal standard.
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8

Fraxiellone-based Thioethers with 1,3,4-Oxadiazole Synthesis

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The intermediate 2-mercapto-5-aryl-1,3,4-oxadiazoles ak (scheme 1) were synthesized as previously reported [24 (link)]. Other reagents were of analytically grade and purchased from commercial resources. Fraxinellone (1) was isolated from Dictamnus dasycarpus and its purity was more than 99% as measured with reverse phase high-performance liquid chromatography (RP-HPLC). Analytical thin-layer chromatography (TLC) and preparative thin-layer chromatography (PTLC) were prepared by silica gel plates using silica gel GF254 (Qingdao Haiyang Chemical Co., Ltd, Qingdao, China). Melting points were determined on a digital melting-point apparatus and were uncorrected (Beijing Tech Instrument Co., Ltd). Optical rotation was measured using an Autopol III automatic polarimeter (Rudolph Research Analytical, NJ, USA). Infrared spectra (IR) were recorded on a PE-1710 FT-IR spectrometer (Perkin-Elmer, Waltham, MA, USA). NMR spectra were obtained in CDCl3 on a Bruker Avance (400 MHz) spectrometer using tetramethylsilane (TMS) as the internal standard (Bruker, Bremerhaven, Germany). High-resolution mass spectra (HR-MS) were carried out with LTQ FT Ultra instrument (Thermo Fisher Scientific Inc., Waltham, MA, USA).

Synthetic route for the preparation of fraxiellone-based thioethers containing 1,3,4-oxadiazole moiety (4ak and 5ak).

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9

Characterization of Synthetic Compounds

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Optical rotations were measured on a RUDOLPH Research Analytical Autopol III Automatic Polarimeter. IR spectra were recorded on a Nicolet Nexus 470 FTIR spectrophotometer. HRMS were obtained on an Orbitrap mass spectrometer with electrospray ionization (ESI). NMR spectra were obtained on a Bruker Fourier 300 spectrometer in CDCl3. The chemical shifts are given in ppm referenced to the respective solvent peak, and coupling constants are reported in Hz. Anhydrous THF and dichloromethane were purified by a PureSolv MD 7 Solvent Purification System from Innovative Technologies (MB-SPS-800). All other reagents and solvents were purchased from commercial sources and were used without further purification. Silica gel column chromatography was performed using silica gel (32–63 μm). Preparative thin-layer chromatography (PTLC) separations were carried out on thin layer chromatography plates loaded with silica gel 60 GF254 (EMD Millipore Corporation). Starting materials 9 and 10 were synthesized using the procedure previously described by us.21 (link)
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10

Purification and Characterization of Compounds

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The UV spectra were obtained from a Hitachi U-3000 spectrophotometer (Hitachi, Tokyo, Japan). Optical rotations were measured on a Rudolph Autopol III automatic polarimeter (Rudolph Research Analytical, Hackettstown, NJ, USA). CD spectra were acquired on a JASCO-810 spectropolarimeter (JASCO, Easton, MD, USA). NMR spectra were obtained using a Bruker DRX-600 NMR spectrometer (Bruker, Fällanden, Switzerland) at room temperature with TMS (tetramethylsilane) or solvent signals as calibration. High-resolution electrospray ionization mass spectrometry (HR-ESI-MS) results were recorded on an Agilent 6210 TOF LC-MS spectrometer (Agilent Technologies, Santa Clara, CA, USA). Silica gel (200–300 mesh) for column chromatography (CC) was purchased from Qingdao Marine Chemical Factory, Qingdao, China. Sephadex LH-20 was produced by Pharmacia Biotech, Uppsala, Sweden. Semi-preparative HPLC purification was carried out on a Kromasil 100-5-C18 column (5 μM, 250 × 10 mm, AkzoNobel, Shanghai, China). All chemicals used in the study were of analytical or HPLC grade.
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