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6 protocols using cellular fibronectin

1

Western Blot Analysis of Epithelial-Mesenchymal Markers

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Equivalent amounts of whole cell lysate were separated by 10% SDS-PAGE, and then transferred to a 0.45 μm nitrocellulose membrane. Membranes were blocked with 5% skim milk, and incubated overnight at 4 °C with the following antibodies: E-cadherin (BD Biosciences, San Jose, CA), cytokeratin-18 and cellular fibronectin (both from Sigma-Aldrich, Oakville, ON, Canada), vimentin, phospho-ERK1/2 mitogen activated protein kinase (MAPK), total-ERK1/2 MAPK, phospho-p38 MAPK, total-p38 MAPK, SLUG, SNAIL, or phospho-SMAD 2/3 (all from Cell Signaling, Danvers, MA). Membranes were then stripped and re-probed for the housekeeping protein, β-tubulin (Sigma-Aldrich, Oakville, ON, Canada).
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2

Malaria Parasite Binding Inhibition Assay

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Ring stage parasite samples were allowed to mature to the trophozoite/schizont stages during in vitro culture for 16–24 h, then mature parasite forms were enriched by gelatin flotation. Parasite binding inhibition assay was performed using a parasite suspension at 2–20% parasitaemia and 0.5% haematocrit [29 (link)]. 20 µl of recombinant endothelial receptors (CD36, ICAM-1, PECAM-1, P-selectin, integrin α3β1, integrin α5β1, integrin αvβ3, JAM-B, from R&D Systems Minneapolis, MN, cellular fibronectin, and laminin from placenta from Sigma, St. Louis, MO) at a concentration of 10 µg/ml were immobilized by adsorption on Petri dishes. The parasite suspension was preincubated with plasma diluted 1:5 for 30 min at room temperature then allowed to bind to the immobilized receptor for 30 min at room temperature. Plates were washed three times with PBS to remove unbound cells. Bound cells were fixed in 0.5% glutaraldehyde for 10 min, stained with 10% Giemsa for 2 min and quantified by counting the number of parasites in 20 high-power fields. Level of inhibition was defined based on the level of IE binding in the presence of a pool of plasma samples collected from malaria-naïve adults in the USA (negative control) as follow (100 − (Ntest/Ncontrol) × 100)). A minimum IE count of 20 in the presence of naïve plasma was required for the results to be accepted.
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3

Extracellular Matrix Ligand Binding Assay

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In the initial screening assay, binding of the rBucl8-CL-Ct to different
extracellular matrix (ECM) ligands was assessed by ELISA [31 (link)]. Wells were coated overnight with 1 μg
of each ligand dissolved in bicarbonate buffer: collagen type I and IV (Sigma),
elastin (Sigma), fibrinogen (Enzyme Research), plasma fibronectin (Sigma),
cellular fibronectin (Sigma), laminin (Gibco), and vitronectin (Sigma). Next, 1
μg per well of rBucl8-CL-Ct in TBS, 1% BSA was added and incubated for two hours
at 37°C. Wells were washed with TBS and bound rBucl8-CL-Ct was detected with
anti-6His-tag mouse mAb (Proteintech) in TBS-1% BSA and a secondary goat
anti-mouse HRP-conjugated Ab (Jackson Immuno Research Laboratories Inc.);
immunoreactivity was detected with ABTS substrate and measured
spectrophotometrically at OD415. Data represent the mean ±SE of three
independent experiments (n = 3), each performed in triplicate wells.
Concentration-dependent binding was assessed in a similar manner, however with
varying concentrations (0–10 μM) of rBucl8-CL-Ct.
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4

Liver Endothelial Cell Migration Assay

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Liver endothelial cells were starved overnight in 0.5% FBS/DMEM F12 (Invitrogen). Fluroblock transwell inserts (BD Biosciences, Franklin Lakes, NJ) were coated with either 0.02 mg/ml plasma fibronectin or cellular fibronectin (Sigma) on both sides for 30 min at room temperature. Cells were plated in the top chamber of transwell filters in media with 0.5% FBS and the filters were placed atop a 24-well plate with media containing 10% FBS. Inserts were incubated at 37°C for 18 h and then stained for 1 h at 37°C with calcein AM (BD Biosciences). Fluorescence intensity was measured from the bottom with a BioTek Synergy 2 microplate reader (Winooski, VT). There were three replicates for each condition.
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5

Immunofluorescence Staining of Microtissues

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Microtissues were fixed with 4% paraformaldehyde in PBS, permeabilized with 0.2% Triton X-100 in PBS, blocked in 10% Goat serum for 1 h at room temperature, followed by incubation with antibodies against phospho-myosin light chain 2 (Thr19/Ser19) (Cell Signaling Technologies, #3674L, 1:100), fibronectin (Abcam, ab2413, 1:100), cellular fibronectin (Sigma, clone FN-3E2, #F6140, 1:100) and N-Cadherin (Cell Signaling, clone 13A9, #14215S, 1:100) overnight at 4 °C, and detected with goat anti-rabbit Alexa 568 (1:1,000)-conjugated antibodies.
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6

Adhesion Assay with Fibronectin

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Twenty-four well plates were coated with Geltrex (Life Technologies) and incubated at 37°C for 30 min. 4 x 104 TSECs were resuspended in DMEM (Invitrogen) that had been premixed with 0.04 mg/ml of either plasma or cellular fibronectin (Sigma) and were seeded onto each Geltrex coated well. For some experiments cells were incubated with blocking antibodies to α5 and α9 on ice for an hour before seeding onto the Geltrex coated dishes. Imaging was done using an Inverted Leica DM IRB microscope.
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