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Inverted phase microscope

Manufactured by Zeiss
Sourced in Germany

The Inverted phase microscope is a laboratory equipment designed for observing and analyzing samples. It features a reversed optical configuration, with the light source and condenser positioned above the specimen stage, and the objective lens situated below. This setup allows for the examination of samples that require a specialized or enclosed environment, such as cell cultures or living organisms. The instrument utilizes phase contrast techniques to enhance the visibility of transparent or low-contrast specimens, providing detailed insights without the need for staining or labeling.

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7 protocols using inverted phase microscope

1

Oral Cancer Cells and NK Cell Co-culture

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The human OC cell lines, WSU-HN4 (donated by the University of Maryland) and SCC-9 (purchased from ATCC, CRL-1629) were cultured in Dulbecco's modified Eagle's medium (DMEM; Gibco; Thermo Fisher Scientific, Inc.) and DMEM/F-12 (1:1) (basal medium, Gibco; Thermo Fisher Scientific, Inc.), respectively. The human NK cell line NK92MI (purchased from ATCC, CRL-2408) was cultured in RPMI-1640 (basal medium, Gibco; Thermo Fisher Scientific, Inc.). All media were supplemented with 10% fetal bovine serum (FBS; Bovogen Biologicals Pty Ltd.) and 1% penicillin-streptomycin (Sigma-Aldrich; Merck KGaA), and all cells were incubated in a humidified incubator with 5% CO2 at 37°C. In all OCEX stimulation experiments, OCEXs were co-cultured with NK92MI cells for 1, 3 and 7 days. In all transforming growth factor (TGF)-β1 stimulation experiments, recombinant human TGF-β1 (PeproTech, Inc.) was used at a concentration of 10 ng/ml for 1, 3 and 7 days, as previously described (32 (link)-34 (link)).
The SCC-9 cells were seeded in a 96-well plate at a density of 1,000 cells per well. Approximately 24 h later, the tumor cells were co-cultured with the NK92MI cells in medium without FBS and penicillin-streptomycin for 4 h, after which the culture supernatant was removed. The wells were washed gently with PBS and observed under an inverted-phase microscope (Zeiss AG).
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2

Investigating TXA Effects on Stem Cells

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Cell cultures were exposed to various concentrations of TXA (no TXA, 10 mg/mL, 20 mg/mL and 50 mg/mL). As negative control groups, we maintained undifferentiated hMSCs and chondrocytes that were both not treated with TXA. The length of exposure was either 10 min, 24 h or 48 h. TXA was applied after 21 days of osteogenic differentiation in hMSCs and after cells had reached confluence in chondrocytes. The aim was to investigate possible effects of TXA on cell viability, osteogenic differentiation capacity of bone marrow-derived hMSCs and the expression of osteogenic and chondrogenic marker genes. Osteogenically differentiated hMSCs that were used for Alizarin Red S staining were only exposed to 50 mg/mL TXA.
The stock solution of TXA (Carinopharm GmbH, Else, Germany) (100 mg/mL) was solved in standard cell culture medium while standard cell culture medium alone served as a negative control. After treatment with TXA, cells were washed in phosphate-buffered saline (PBS) and prepared for further histological, biochemical and molecular biological experiments. Images of chondrocytes were taken straight after the respective treatment period with TXA using an inverted-phase microscope (Carl Zeiss Jena GmbH, Jena, Germany).
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3

Quantifying Cell Migration and Invasion

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The mobility of transfected cells was detected using transwell chambers (Corning, China); for migration, 5 × 104 cells per chamber were cultured in transwell chambers without basement membrane coating. For invasion, 1 × 105 cells/chamber were cultured in transwell chambers containing a basement membrane coating. Afterward, the cells were incubated for 24 h in an incubator at 37 °C with 5% CO2; the cells of the inner chamber were wiped using a swab and cells on the outer chamber were fixed using methanol for 15 min and stained using 0.5% crystal violet (Solarbio, China) for 30 min. Then, the cells were washed three or four times with phosphate buffered saline and observed under an inverted phase microscope (ZEISS, Germany) to obtain field images.
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4

Neuronal Differentiation of SH-SY5Y Cells

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Neuronal differentiation was performed in SH-SY5Y cells using RA (retinoic acid, 10 uM) following the protocol of Kunzler et al. [65 (link)]. Briefly, cells were treated with RA in HAM F10 and DMEM (1:1) medium containing 1% FBS for 7 days. The medium, with RA (10 µM) and 1% FBS, was changed every 2 days until completion of the differentiation period (7 days). For AChEIs-induced neuronal differentiation assays, the same protocol was performed (except for the addition of RA). The analysis of the percentage of neuronal differentiation and neurite outgrowth was performed according to a previous protocol [38 (link)]. Briefly, a total of 20 photographs (20× magnification) were taken of each group treatment using an inverted phase microscope (Zeiss, Jena, Germany) to quantify the percentage of differentiated cells and neurite size; the ImageJ software (Fiji, image processing package) and the Simple Neurite Tracer plugin were used for these measurements. Differentiated cells were considered for those that had at least one neurite larger than the cell diameter; a total of 100 cells per treatment and in experimental triplicate were analyzed. In addition, the neurite sizes of these cells were quantified, considering only one neurite per cell.
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5

Angiogenesis Assay using HUVECs

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Human umbilical vein endothelial cells (HUVECs) were cultured in Vascular Cell Basal Medium (ATCC, Manassas, VA) supplemented with Endothelial Cell Growth Kit-BBE (ATCC) that does not contain VEGF. Fifteen-well plates (angiogenesis μ-slide; Ibidi, Madison, WI) were coated with Matrigel (BD Biosciences) at 4°C and incubated at 37°C to allow polymerization. Upon confluence, third or fourth passage HUVECs were released with Accutase cell detachment solution (Millipore, Billerica, MA), resuspended in serum-free growth medium, and plated onto the Matrigel-coated wells at 10,000 cells per well. Patient plasma was added at 2% concentration. After an 18-hour incubation, 3 visual fields per well were captured using an inverted phase microscope (Zeiss, Dublin, CA). Images were analyzed with image processing software (Angiogenesis Analyzer for ImageJ; National Institutes of Health, Bethesda, MD) for quantitative assessment of 3 different measurements of angiogenesis, specifically total segment length, number of segments, and number of meshes per visual field. The readout of each parameter was the median of 3 visual fields per well.
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6

Anchorage-Independent Colony Formation Assay

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For anchorage-independent colony formation, 0.8% agar (Difco) in a growth medium was precoated on six-well plates, and MCF7 and MDA-MB-231 cells (1 Â 10 4 and 2.5 Â 10 3 cells per well, respectively) mixed with a medium containing 0.7% agar were then spread on top of the base agar layer. The cells were treated with either a vehicle (DMSO) or RO4929097 twice per week. After 21 days of incubation, colonies were stained with 0.5% crystal violet (Sigma-Aldrich) and washed with PBS. The stained colonies were then counted and photographed using the inverted phase microscope (Carl Zeiss).
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7

RAW 264.7 Mouse Macrophage Osteoclast Assay

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The RAW 264.7 mouse macrophage cell line (ATCC, Manassas, USA) was cultured with OCM-BioS-2P or OCM-Control. The cells were seeded at the following densities, according to the experiment: cell morphology analysis: 1x10 4 on Thermanox ® coverslips (Nunc, Rochester, USA) in 24-well plates (Corning Inc, Corning, USA); osteoclast viability and activity assays: 5x10 3 in 96-well plates (Corning); resorption assay: 5x10 3 (link) in Osteo Assay 96-well Strip Plate (Corning). The cells were kept in a 5% CO 2 incubator at 37°C, the medium was changed every 48 h and the culture progression was evaluated using an inverted phase microscope (Zeiss, Jena, Germany).
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