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Alexa fluor 568 conjugated donkey anti rabbit antibody

Manufactured by Thermo Fisher Scientific

Alexa Fluor 568-conjugated donkey anti-rabbit antibody is a secondary antibody that binds to rabbit primary antibodies. The antibody is labeled with the Alexa Fluor 568 fluorescent dye, which can be detected using appropriate fluorescence detection methods.

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5 protocols using alexa fluor 568 conjugated donkey anti rabbit antibody

1

Immunofluorescence Analysis of Osteocalcin and PLEKHO1

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The bone specimens were fixed with 4% buffered formalin and embedded with O.C.T. after decalcification with 10% EDTA. The frozen sections (5 μm thickness) were cut in a freezing cryostat at −20 °C. The sections were air dried at room temperature, fixed in ice-cold acetone for 10 min, permeablilized with 0.1% Triton X-100 at room temperature for 20 min, and blocked in 5% donkey serum in PBS. The sections were then incubated overnight at 4 °C with the mixture of goat polyclonal osteocalcin antibody (Santa Cruz Biotechnology, Inc.), and rabbit polyclonal PLEKHO1 antibody (Santa Cruz Biotechnology, Inc.). Following three washes in PBS, the sections were incubated with the mixture of Alexa Fluor 488-conjugated donkey anti-goat antibody, and Alexa Fluor 568-conjugated donkey anti-rabbit antibody (Invitrogen) for 1 h. Negative control experiments were done by omitting the primary antibodies. The sections were mounted with the medium containing DAPI and then examined under a fluorescence microscope (DM6000B, Leica image analysis system) [30 (link),31 (link)] .
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2

Histological and Immunofluorescence Analysis of Mouse Ovaries

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For histological analysis, mouse ovaries were fixed in Bouin’s solution overnight, dehydrated in an ethanol gradient, embedded in paraffin, and cut into 5 μm sections. The sections were then deparaffinized, rehydrated, and stained with H&E following standard procedures. For IF experiments, WT and p63+Δ/TID (or p63+/R647C) ovaries or skin samples were fixed in 4% PFA, embedded in paraffin, and sectioned at 5 μm thickness. The slides underwent antigen retrieval and were then blocked, followed by incubation at 4°C overnight with the following primary antibodies: anti-DDX4 (1:600 dilution, Abcam, catalog ab27591); anti-p63 (1:200 dilution, Abcam, catalog ab124762); anti–cleaved-PARP1 (1:400 dilution, Cell Signaling Technology, catalog 94885S); anti-K10 (1:150 dilution, Abcam, catalog ab76318); anti-K14 (1:100 dilution, Santa Cruz Biotechnology, catalog sc-53253); and anti-Ki67 (1:200 dilution, Abcam, catalog ab15580). The slides were then washed in PBS, incubated with secondary antibodies (Alexa Fluor 568–conjugated donkey anti-rabbit antibody or Alexa Fluor 488–conjugated donkey anti-mouse antibody, 1:800 dilution, Invitrogen, Thermo Fisher Scientific, catalogs A21202 and A10042) for 1 hour at room temperature, and then sealed in antifade fluorescence mounting medium (Abcam). Images were captured with a fluorescence microscope (Olympus) and analyzed with ImageJ.
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3

Visualizing Biocytin-Filled Neurons

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Brain slices were first fixed in 4% PFA in 0.01 M PBS after recordings, then slices were incubated with blocking buffer containing 2% Triton X-100 (Sigma-Aldrich) and either 5% normal goat serum or 5% normal donkey serum in PBS for 1 h at room temperature. To visualize biocytin-filled cells and confirm their identity, slices were incubated with Alexa Fluor 350-conjugated streptavidin (1:200, S11249, ThermoFisher Scientific) and either chicken anti-GFP antibody (1:300, GFP-1020, Aves) for Hcrt-GFP neurons or rabbit anti-DsRed antibody (1:1,000, 632496, Clontech) for Gad2–mCherry neurons in PBS containing 1% Triton X-100 and 5% corresponding serum overnight. Secondary antibodies used were either Alexa Fluor 488-conjugated goat anti-chicken antibody (1:1,000, A11039, ThermoFisher Scientific) or Alexa Fluor 568-conjugated donkey anti-rabbit antibody (1:1,000, A10042, ThermoFisher Scientific). Images were acquired using a Zeiss Cell Observer and Zeiss 510 confocal microscope.
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4

Fluorescent Protein Immunolabeling Protocol

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Yellow fluorescent protein immunoreactivity was detected using chicken anti‐GFP (1:500; Abcam). tdRFP expression was detected with an antibody raised against dsRed‐Express (1:500; #632496, Takara Bio, Mountain View, CA, USA). Free‐floating sections were incubated for 48 hr at 4 °C with primary antibodies in blocking solution (PBS with 0.3% triton X‐100, 1% BSA, 1% Normal Goat Serum, 1% Normal Donkey Serum) followed by incubation with Alexa Fluor 488‐conjugated goat anti‐chicken antibody (1:1,000; #A‐11039, ThermoFisher Scientific) and/or Alexa Fluor 568‐conjugated donkey anti‐rabbit antibody (1:1,000; #A‐10042, ThermoFisher Scientific) in blocking solution for 2 hr. Sections were subsequently mounted and coverslipped for microscopic analysis of fluorescent labeling.
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5

Immunostaining of BEST1 and ZO-1 in Cells

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Cells were washed in ice-cold phosphate-buffered saline (PBS) and fixed in 2–4% paraformaldehyde at 4℃ for 30 minutes. Fixed cells were washed twice in PBS and placed in blocking solution (10% normal donkey or goat serum and 0.01–0.05% Triton-X100 in PBS) for 1 hour at room temperature. Cells were then incubated overnight at 4℃ with mouse anti-BEST1 monoclonal antibody (E6-6) (Thermo Fisher Scientific) and rabbit anti-ZO-1 polyclonal antibody (Thermo Fisher Scientific). The following day, cells were washed three to five times in PBS with 0.01% Triton-X100 and incubated with Alexa Fluor 488-conjugated goat anti-rabbit antibody (Thermo Fisher Scientific) and Alexa Fluor 568-conjugated donkey anti-rabbit antibody (Thermo Fisher Scientific). After secondary antibody incubation, cells were stained with DAPI (Thermo Fisher Scientific), washed three times in PBS with 0.2% Triton-X100, and imaged on a confocal microscope (Zeiss, Jena, Germany).
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