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5 protocols using sb203580

1

Thymoquinone Modulation of Apoptosis Pathways

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Thymoquinone, bovine serum albumin (BSA) and the antibody against alpha‐smooth muscle actin (α‐SMA) were obtained from Sigma. Thymoquinone was stored at 4°C and dissolved in olive oil. Foetal bovine serum (FBS) and DMEM were obtained from Life Technologies. The antibodies against cleaved PARP, Bax, voltage‐dependent anion channel (VDCA), cytochrome C, p‐c‐Jun NH2 terminal protein kinase (p‐JNK), JNK, p‐p38MAPK and p38MAPK were purchased from Abcam. The antibodies against cleaved caspase 3, p‐AKT, AKT, p‐extracellular signal‐regulated kinase 1/2 (p‐ERK), ERK1/2, Bcl‐2, GAPDH, β‐actin, the peroxidase‐conjugated anti‐rabbit and anti‐mouse secondary antibodies were purchased from Cell Signaling Technology. The antibody against PTEN was purchased from Santa Cruz). SB203580 (a p38MAPK inhibitor) was purchased from TargetMol. MTT kit was purchased from Beyotime Biotechnology.
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2

Purification and Application of Isotalatizidine

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Isotalatizidine was extracted and purified by the Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College, and the purity was validated as > 95% using high-performance liquid chromatography. For the experiments, it was dissolved in dimethyl sulfoxide (DMSO) and subsequently diluted in sterile saline (0.9%). SB203580 and U0126-EtOH were all purchased from TargetMol (Shanghai, China). KG-501 was purchased from MedChemExpress (Shanghai, China) and dissolved in DMSO, and diluted with DMEM, DMEM/F-12, or saline before use. The cell culture reagents were purchased from the Invitrogen Corporation (Thermo Fisher Scientific, Carlsbad, CA, USA). Anti-dynorphin A antibody was purchased from Abcam (Cambridge, UK), and the Alexa 546-conjugated goat anti-rabbit and Alexa 488-conjugated goat anti-mouse secondary antibodies from the Life Technology (Thermo Fisher Scientific, Carlsbad, CA, USA). The remaining antibodies were purchased from the Cell Signaling Technology (Beverly, MA, USA). The goat serum was purchased from the Beyotime Biotechnology (Shanghai, China), and triton X-100 from the Sigma Aldrich.
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Western Blot Analysis of Protein Targets

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Antibodies against the following proteins were used for Western blot: RPS15 (1:2000, Abcam; ab157193), IGF2BP1 (1:1000, Cell Signaling Technology; 8482), phospho-p38 MAPK (1:1000, Cell Signaling Technology; 9211), p38 MAPK (1:1000, Cell Signaling Technology; 9218), MKK6 (1:1000, Cell Signaling Technology; 8550), β-actin (1:1000, Cell Signaling Technology; 4970), Flag-tag (1:5000, Immunoway; YM3001), Myc-tag (1:5000, Immunoway; YM3203), m6A antibody (Thermo; MA5-33030) and rabbit IgG (Millipore; PP64B)-Diquafosol tetrasodium (CAS: 211427-08-6; T7423), Coenzyme A (CAS: 85-61-0; T10857), Folic acid (CAS: 59-30-3; T0062), Epicatechin gallate (CAS: 1257-08-5; T2732), and Methotrexate (CAS: 59-05-2; T1485) were purchased from TargetMol and SB203580 (CAS: 152121-47-6; T1764).
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4

Signaling Pathways Regulate Cell Adhesion

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As per the cell adhesion experiment, the signaling pathway-specific inhibitors of ERK1/2 (U0126; TargetMol, China), JNK (SP600125; TargetMol), and p38 MAPK (SB203580; TargetMol) were added to the medium to examine the role of potential signaling pathways in the effects of Hst1 on the spreading of hASCs. hASCs were pretreated with or without 10 mM of inhibitors for 2 h in serum-free medium before seeded on glass coverslips in 48-well plates at a density of 1.2 • 10 4 cells/well. Cell adhesion and spreading assays were performed as described in the Measurement of Cell Adhesion and Spreading on Glass Surface section.
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5

Cytokine Expression in U937 Cells

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U937 cells, with a density of 106 cells/ml, were put in each well of the 48 well plates. In the experiment of gingival fibroblasts, a density of2x104 (link) cells was selected. Before studies, the starvation was accomplished in a serum-free medium for 24hr. After being treated with different concentrations of S. aureus LTA and PGN for 48hr, the supernatants were collected, centrifuged, and stored at −80 °C for later analysis. The ranges of 0–10 μg/ml and 0–100 μg/ml were selected for LTA and PGN, respectively, according the previous report.27 (link) In the experiment treated with NF-κB inhibitor (100 μM PDTC) (Sigma–Aldrich) and MAPK inhibitors (10 μM SCH7 72984 for extracellular signal-regulated kinase 1 and 2, ERK 1/2; SB203580 for P38 MAPK; and SP600125 for c- Jun N-terminal kinase, JNK) (TargetMol, Boston, MA, USA), cells were pretreated with inhibitor 1–2 h prior to stimulation. Then, S. aureus LTA or PGN (10 μg/ml in each) was added for 48 h. The supernatants were collected, centrifuged and stored at −80 °C for later zymography.
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