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Clone mi15

Manufactured by Agilent Technologies
Sourced in United States

The Clone MI15 is a compact and versatile laboratory instrument designed for DNA amplification and analysis. It features a high-performance thermal cycler capable of performing polymerase chain reaction (PCR) experiments. The device is equipped with a precise temperature control system and supports a range of reaction volumes to accommodate various experimental needs.

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4 protocols using clone mi15

1

Histological Profiling of Synovial Tissues

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Formalin-fixed, paraffin-embedded synovial tissues of RA or OA patients were cut, put on slides and stained with hematoxylin/eosin. 36 synovial tissues from hands (22 from joint replacement and 14 from synovial biopsies) and 27 from knee (18 from joint replacement and 9 from synovial biopsies) were assessed. Synovitis score was assessed by evaluation of the thickness of the lining cell layer, the cellular density of synovial stroma and leukocyte infiltration as described by Krenn et al.30 (link). Vascularization was assessed by counting the amount of CD31+ cells (ab28364, Abcam; dilution: 1:50) on 5 consecutive pictures on 20× objective. Synovial tissue were stained with CD3 (ab16669, Abcam; dilution: 1:200), CD20 (M0755, Agilent/Dako; dilution: 1:50), CD138 (Clone MI15, Agilent/Dako; dilution: 1:50) and CD68 (M0814, Agilent/Dako; dilution: 1:50), to stratify them into lymphoid, myeloid and fibroid histological patterns according to previously published histological features7 (link),9 (link),30 (link).
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2

Immunohistochemical Characterization of SDC1

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A mouse monoclonal antibody against SDC1/CD138 (clone MI15, dilution 1:100, Dako/Agilent, Santa Clara, CA, USA) was used to perform IHC staining after heat-based antigen retrieval (30 min, 96°C, pH 6.0) on the 4 µm thick FFPE sections. Automated IHC was performed using the Dako Autostainer Plus System (Dako) with the anti-mouse IgG EnVision Plus detection kit (Dako) for secondary and tertiary immunoreactions. Negative controls were calculated by each run [20 ]. Reaction products were developed with diamino-benzidine (DAB), according to general protocols. SDC1 staining intensity was scored as 1, 2, or 3, equivalent to negative, moderate, and strong intensities. A percentage score was also defined as 0–10%—0 Pts., 11–20%—1 Pt., 21–30%—2 Pts., 31–40%—3 Pts., 41–50%—4 Pts., 51–60%—5 Pts., 61–70%—6 Pts., 71–80%—7 Pts., 81–90%—8 Pts., 91–100%—9 Pts. Finally, a score was calculated by multiplying the intensity score and percentage score. Moderate SDC1 expression was considered as a score between 4 and10, and strong expression was considered as a score higher than 12. SDC1 expression was evaluated separately for cell membrane, cytoplasm, and stroma.
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3

Quantifying Plasma Cell Enumeration

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Cultured cells (5× 104 - 5× 105) were cytocentrifuged onto poly-L-lysine-coated slides (for 5 minutes at ~120 g; Cyto-Tek centrifuge model 4332; Sakura Finetek, Japan). Slides were air-dried for 1 hour at 22°C and then fixed in 4% paraformaldehyde at 4°C for 10 minutes. Subsequently, they were blocked with 2% bovine serum albumin in PBS and incubated with Hoechst 33342 solution (2 μg/mL, Cat. B2261; Sigma-Aldrich) to stain DNA. We stained for plasma cells with mouse anti-human CD138 mAb (1:250, Clone MI15, Dako), donkey anti-mouse IgG Alexa 594 (1:300, A21203; Molecular Probes-Invitrogen) and goat anti-human IgG Alexa 488 (1:500, A11013; Molecular Probes-Invitrogen). Slides were mounted in 80% glycerol-TBS and stored at 4°C in the dark. All washing and incubation steps were performed with TBSTriton X-100 (0.03%). We counted the plasma cells from each well, in a blinded fashion, on a fluorescence microscope (Olympus BX51), identifying them by their distinctive size, shape (extensive cytoplasm and eccentric nuclei), and positive staining for internal IgG and/or surface CD138. Absolute numbers of plasma cells per well are given in Table 2 and shown in the Figures as the % of those in untreated cultures. Total numbers of recovered cells were measured by automated counting of trypan blue-excluding cells (TC20 Automated Cell Counter, BioRad).
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4

Immunohistochemical Analysis of CD30+ Cells

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Formalin-fixed and paraffin-embedded (FFPE) biopsies of reactive lymph nodes for which parts were also available as frozen tissue were stained for CD30 with the anti-CD30 monoclonal antibody BerH2 (Dako, Hamburg, Germany) to identify lymph nodes with a substantial number of CD30+ cells. Five of the eight cases included in the IGHV gene analysis were further characterized by double stainings for CD30 (clone EP154, Diagnostic Biosystems, Pleasanton, CA, USA, at dilution 1:100) combined with staining for PAX5 (clone DAK-PAX5, Dako, at dilution 1:100), CD138 (clone MI15, Dako, at dilution 1:100), or MUM1/IRF4 (clone MUM1P, Dako, at dilution 1:100). The double stainings were performed using the Vecta Fluor Duet Double Labeling Kit DK-8828, Vector Laboratories, Newark, CA, USA.
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