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6 protocols using anti p70s6

1

Protein Expression Analysis in Tumor Tissues

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Cells were lysed using boiling hot SDS lysis buffer (1.1% SDS, 11% glycerol, 0.1 mol/L Tris, pH 6.8) with 10% β-mercaptoethanol. Tumor tissue was crushed using a tissue lyser (TissueLyser II, QIAGEN) and cells were gently lysed using Triton X-100. Blots were probed with anti-α-tubulin (Merck), anti-HTR4 (ThermoFischer), anti-cleaved Caspase 8, anti-Akt, anti-p-Akt (Ser 473), anti-S6, anti-p-S6 (Ser235/6, Ser240/4), anti-p70 S6, anti-p-p70 S6 (Thr421/Ser424), anti-p-ERK1/2, anti-ERK1/2, anti-p-CREB (Ser133) and anti-CREB (all from Cell Signaling) and detected using the Odyssey infrared imaging system (Odyssey Fc, LI-COR Biosciences). Immunoblots were quantified using ImageJ.
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2

Dissecting Apoptotic Signaling Pathways in AGS Cells

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1 × 106 AGS cells were treated with the 201E4 mAb (20 μg/ml) and collected at 0, 12, 24, and 36 h after mAb 201E4 incubation. Cell lysate proteins (50 μg per lane) were loaded on SDS‐PAGE, transferred to PVDF, and probed with specific Abs, such as anti‐caspase‐8, anti‐cleaved‐caspase‐8/9 and anti‐Bak (Immunoway); anti‐caspase‐3, anti‐cleaved‐caspase‐3, anti‐PARP, anti‐AKT, anti‐pAKT, anti‐p44/42, anti‐p‐p44/42, anti‐p70 S6, anti‐PI3K p85, anti‐p53, anti‐Bcl‐XL and anti‐GAPDH (Cell Signalling Technology, USA), anti‐β‐action (ABclonal). All antibodies were diluted in 1% BSA‐TBST.
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3

Western Blot Analysis of Signaling Pathways

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Cells were lysed using boiling hot SDS lysis buffer (1.1% SDS, 11% glycerol, 0.1 mol/L Tris, pH 6.8) with 10% β-mercaptoethanol. Blots were probed with anti-α-tubulin (Merck), anti-HTR1D (ThermoFischer, SantaCruz), anti-Akt, anti-p-Akt (Ser 473), anti-S6, anti-p-S6 (Ser235/236), anti-p70 S6, anti-p-p70 S6 (Thr421/Ser424), anti-p-ERK1/2, anti-ERK1/2, anti-NF-κB p65 anti-STAT-1, anti-Caspase-3, anti-Caspase-9, anti-Caspase-8, anti-AMPK and anti-p-AMPK (Thr172) (all from Cell Signaling) and detected using the Odyssey infrared imaging system (Odyssey Fc, LI-COR Biosciences). Immunoblots were quantified using ImageJ.
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4

Protein Expression Analysis in HepG2 Cells

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After treatment, HepG2 cells were lysed in cell lysis buffer (Cell Signaling Technology, Beverly, MA, USA) containing 1 mmol/l phenylmethylsulfonyl fluoride. As previously described [26 (link)], the protein concentration in each sample was measured with a Bio-Rad detergent-compatible protein assay (Bio-Rad laboratory, Tokyo, Japan). Samples containing 10 μg of protein were resolved by electrophoresis on 12% sodium dodecyl sulfate-polyacrylamide gel and transferred to a polyvinylidene difluoride membrane (Bio-Rad), followed by incubation with primary antibodies targeting cyclin D, cyclin-dependent protein 4(CDK4), and β-actin [28 (link)]. After incubation with the secondary antibody (horseradish peroxidase-conjugated sheep anti-rabbit IgG, 1:20,000), reaction products were detected with an Amersham ECL Plus system and an enzyme-linked chemiluminescence detection kit (Amersham Biosciences, Piscataway, NJ, USA), and the band density was quantified using a LumiVision Analyzer (Aisin, Kariya, Japan). The following primary antibodies were used: anti-cyclin D, anti-p21, anti-p53, anti-p70S6, anti-cleaved caspase3, anti-caspase3, and anti-β-actin (all from Cell Signaling Technology, Beverly, MA, USA), anti-Cdk4, anti-sodium glucose co-transporter 1, and anti-sodium glucose co-transporter 2 (al from Abcam, Cambridge Science Park, Cambridge, UK).
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5

Immunoblotting and Mitochondrial Staining

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Anti-LC3B, P62, type I collagen and BNIP3 antibodies were purchased from Abcam (Cambridge, MA); anti-α-tubulin antibody from Sigma (St. Louis, MO), and anti-p70S6, p-mTOR and mTOR antibodies from Cell Signaling Technology (Danvers, MA). MitoSOX Red, Mitotracker Deep Red, Alexa 488 and Alexa 633-conjugated secondary antibodies were obtained from Invitrogen (Carlsbad, CA).
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6

Immunoblotting Analysis of AMPK Signaling

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Media for cell culture, anti-hemagglutinin (HA) polyclonal antibody, and LipofectAMINE Plus reagent were ordered from Invitrogen (Carlsbad, CA, USA). Anti-AMPKα (AMPK α-subunit), anti-phosphorylated AMPKα (Thr 172), anti-ACCα, anti-phospho-ACCα, anti-p70S6, and anti-phospho-p70S6 antibodies were purchased from Cell Signaling Technology (Beverly, MA, USA). Monoclonal anti-HA was from Roche Molecular Biochemicals (Indianapolis, IN, USA). The anti-myc antibody and the polyclonal anti-HA antibodies were from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The anti-human synphilin-1 polyclonal antibody was generated using the human synphilin-1 fragment (34–500 aa) as the antigen as previously described [3 (link)]. Anti-actin antibody was from Sigma (St. Louis, MO, USA). Compound C (an AMPK inhibitor) [40 (link)] was from Sigma (Burlington, MA, USA).
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