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3 protocols using cx3cr1

1

Macrophage Phenotyping Immunohistochemistry

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Tamoxifen (non-pharmaceutical grade) was purchased from Sigma-Aldrich (St Louis, MO). Clodronate Liposomes were purchased from Encapsula Nanoscience (Encapsula Nanoscience LLC, Brentwood, TN). Giemsa cytological stain was purchased from Sigma-Aldrich. Antibodies used for immunohistochemical and flow cytometric analysis were: CD45 (1:250, Santa Cruz); Eisoniphil Peroxidase (1:150, Santa Cruz); Myeloperoxidase (1:150, Novus Biologics); iNOS (1:200, Abcam); CD11b (1:1500, Abcam); FIZZ-1 (1:800, Stem Cell Technologies); CD64 (1:250, Bioss Antibodies); CCR2 (1:400, Abcam); CCR4 (1:400, Abcam); CX3CR1 (Bioss Antibodies); CD16/32 (eBiosciences), CD11b (eFluo450, eBiosciences); Fixable Viability dye (eFluo780, eBiosciences); SiglecF (PE-CF594, BD Biosciences); CD45 (PerCP5.5, Biolegend); CD11c (BV705, Biolegend); Ly6G (AF700, biolegend); Ly6C (BV510, Biolegend); CD64 (PE/Cy7, Biolegend); CD3 (BUV395, Biolegend); CD43 (PE, Biolegend); CCR2 (AF647, Biolegend). All other reagents were purchased from Thermo Fisher Scientific, Inc. (Waltham, MA), or Sigma-Aldrich.
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2

Tamoxifen-mediated Immunomodulation Assay

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Tamoxifen (non-pharmaceutical grade) was purchased from Sigma-Aldrich (St Louis, MO). Giemsa cytological stain was purchased from Sigma-Aldrich. Antibodies used for in situ hybridization, immunohistochemical and flow cytometric analysis were: tgfb1 (Cat # 407751, Advanced Cell Diagnostics, ACD); RFP (Cat # ab62341; 1:1000, Abcam, Cambridge, MA); Arg1 (Cat # ab91279; 1:1500, Abcam); iNOS (Cat # ab15323; 1:200, Abcam); CD64 (Cat # bs-3511R; 1:250, Bioss Antibodies, Woburn, MA); CCR2 (Cat # EPR20844; 1:400, Abcam); phospho-SMAD2/3 (Cat # PA5-37636; 1.500, Invitrogen CX3CR1 (Cat # bs-1728R; Bioss Antibodies); CD64 (Cat # bs-3511R; Bioss Antibodies); CD125/IL-5RA (Cat # bs-2601R, Bioss Antibodies); C1q (Cat # A0136; 1:500, Dako/Agilent Technologies, Santa Clara, CA); CD16/32 (clone 93; eBiosciences, San Diego, CA), CD11b (clone # M1/70; eFluo450, eBiosciences); Fixable Viability dye (Cat # 65-0865-14; eFluo780, eBiosciences); SigF (clone S17007L; PE-CF594, BD Biosciences, San Jose, CA); CD45 (clone 30-F11; PerCP5.5, Biolegend, San Diego, CA); CD11c (clone # N418; BV705, Biolegend); Ly6G (clone # 1A8; AF700, Biolegend); Ly6C (clone HK1.4, BV510, Biolegend); CD64 (clone X54-5/7.1; PE/Cy7, Biolegend); CD43 (clone # S11; PE, Biolegend); CD3 (clone # 17A2; BUV395, Biolegend). All other reagents were purchased from Thermo Fisher Scientific, Inc. (Waltham, MA), or Sigma-Aldrich.
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3

Antibody Panel for Macrophage Characterization

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The anti-F4/80 antibody was purchased from Bio-Rad (Hercules, CA, USA). The anti-iNOS antibody was purchased from BD Transduction Laboratories (San Jose, CA, USA), Thermo Scientific (Fremont, CA, USA) or Abcam (Cambridge Science Park, Cambridge, UK). CX3CR1 was obtained from Bioss (Woburn, Massachusetts, USA). CD68 was obtained from Abcam and CD206 from Bioss, BIO-RAD (Hercules, CA, California) or R&D Systems (Minneapolis, MN, USA). Antibodies against phospho-STAT1, STAT1, phospho-STAT3, STAT3 and β-actin were purchased from Cell Signaling Technology (Danvers, MA, USA).
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