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10 protocols using 213 ilb

1

Co-culture of A549 Cells and Polarized Macrophages

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For co-culture experiments with A549 cells and polarized macrophages, differentiated M0 macrophages from THP-1 were transferred into a 12-transwell insert (2 × 105 cells /insert, membrane pore size of 0.4 μm, Corning, #3450) and treated with 10 pg/ml of lipopolysaccharide (LPS; Sigma, #8630), or 20 ng/ml of interleukin 4 (R&D Systems, #204-IL) and 20 ng/ml of interleukin 13 (R&D Systems, #213-ILB), for 72 h. A549 cells were seeded into a new 12-well plate (2 × 104 cells/well) and incubated in RPMI containing 10% FBS, 24 h prior to co-culture. Polarized macrophages were washed with PBS three times in transwell inserts and co-cultured with A549 cells already plated in a new 12-well plate. After 48 h, only cells were collected for further experiments such as quantitative real-time polymerase chain reaction (PCR) or enzyme-linked immunosorbent assay (ELISA).
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2

VSMC Responses to IL-13 Exposure

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Human vascular smooth muscle cells (VSMCs, CC-2571; Lonza, Visp, Switzerland) were grown in endothelial cell growth medium (EGM)-2 plus bullet kit media (CC-3162; Lonza). Human retinal endothelial cells (HRECs, ACBRI181; Cell Systems, Kirkland, WA) were grown in CSC complete recombinant media (SF-4Z0; Cell Systems). To study the role of VSMCs, they were exposed to or not exposed to 2, 10, and 50 ng/ml of recombinant interleukin (IL)-13 (213-ILB; R&D Systems, Minneapolis, MN). After incubating for 24 h, the total RNA was extracted using TRIzol reagent (Life Technologies). After a 72-h incubation, the supernatant was collected and the lysated protein was extracted with lysis buffer.
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3

Macrophage Polarization Protocol

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Cells were seeded in 24-well plates in growth media and stimulated with phorbol 12-myristate 13-acetate (PMA, 100 nM; Merck, P8139) for 6 hours (h) at 37 °C for macrophage differentiation. Following differentiation, cells were treated with growth media containing lipopolysaccharide (LPS, 10 ng/mL, Merck, L4391) and interferon γ (INFγ, 5 ng/mL, R&D Systems, 285-IF) or interleukin 4 (IL-4, 25ng/ml R&D Systems, 204-IL) and IL-13 (25 ng/mL, R&D Systems, 213-ILB) for 24 h for M1 or M2 polarization, respectively. The specific macrophage polarization was validated by measuring the mRNA expression of M1 and M2 markers in the cells by real-time quantitative PCR (RT-qPCR). Two independent polarization experiments were performed.
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4

Differentiation and Modulation of Human Airway Epithelial Cells

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After proliferation submerged culture condition, the first-passage HAECs were seeded in 12-well Transwell plates as previously described (39 (link), 45 (link)). When confluent, HAECs were shifted to ALI culture with 50 μL apical media for 8 days to achieve full differentiation with and without IL-13 (10 ng/mL) stimulation (R&D Systems, 213-ILB).
Dicer siRNA KD of ALOX15 was performed in 12-well Transwell plates, as previously described (45 (link)). After transfection for 24 hours, IL-13 was added into lower chamber media every 48 hours for up to 7 days. ALOX15 dicer siRNA was purchased from IDT.
A selective enzymatic inhibitor of 15LO1, BLX2477 (gift from Hans-Erik Claesson, Karolinska Institutet, Stockholm, Sweden; ref. 15 (link)), was added at a final concentration of 2 mM for 24 hours. A selective enzyme inhibitor of SLC7A11, erastin (Sigma-Aldrich, E7781; ref. 19 ) was added at 10 μM into the medium for 24 hours before harvest, with dimethyl sulfoxide or water added as vehicle control. Total protein from freshly brushed and cultured HAECs was collected in cell lysis buffer, homogenized by sonication, and then centrifuged at 1,699g for 10 minutes. The apical supernatant was used for GSH:GSSG and protein analysis.
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5

Generation of M1 and M2 Macrophages from PBMCs

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M2 and M1 macrophages were generated by the generally established methods [38 (link),39 (link)]. Human peripheral blood mononuclear cells (PBMCs) were collected from the peripheral blood of healthy volunteers using a BD Vacutainer® CPT™ (BD Bioscience), and monocytes were isolated using a MidiMACS™ Separator (130-042-302, Miltenybiotec, Bergisch Gladbach, Germany), LS column (130-042-401, Miltenybiotec) and CD14 MicroBeads human (130-050-201, Miltenybiotec). CD14+ monocytes were cultured in a 12-well plate at a density of 5 × 105 per well at 37 °C in 5% CO2 atmosphere in RPMI1640 (Sigma-Aldrich) supplemented with 20 ng/mL of M-CSF (216-MC, R&D systems, Minneapolis, MN, USA), penicillin/streptomycin and 10% heat-inactivated FBS for 6 days. Subsequently, we continued to culture the cells in the same medium for 3 days to generate M0 macrophages, while we added 20 ng/mL each of IL-4 (204-IL, R&D Systems), IL-10 (217-IL, R&D systems) and IL-13 (213-ILB, R&D systems) into the culture medium and continued to culture the cells for 3 days for the generation of M2 macrophages. To differentiate M1 macrophages, we utilized 20 ng/mL of GM-CSF (7954-GM, R&D Systems) and 20 ng/mL each of LPS (L2630, Sigma-Aldrich), IFN-γ (285-IF, R&D Systems) and IL-6 (206-IL, R&D Systems).
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6

M2 Macrophage Infiltration Assay

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THP-1 cells were differentiated into macrophages induced by 150 nM phorbol 12-myristate 13-acetate (PMA; Sigma, USA) with 24 h. Then, macrophage M2 polarization was obtained by incubation with 20 ng/ml of interleukin 4 (R&D Systems, #204-IL) and 20 ng/ml of interleukin 13 (R&D Systems, #213-ILB) for 48 h. M2 macrophage infiltration assays were applied through seeding 1.0×105 M2 macrophage cells (300μl) without serum in the upper chamber of a Transwell plate for 48 h (size 5mm, Corning, NY, USA). In bottom plate, U87 and U251 glioma cells (1.0×105) were cultured with10% FBS in DMEM (700μl). After incubation for 48 h, the cells in the upper chamber were fixed with 4% paraformaldehyde for 10 min and stained with 0.1% crystal violet for 10s. The infiltrated M2 macrophage cells were counted in three randomly selected fields from each membrane.
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7

VSMC-Conditioned Media Production

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To produce VSMC-conditioned media, VSMCs were cultured for 2 days on type 1 collagen at 37 °C in Dulbecco's Modified Eagle's Medium (DMEM, D6046; Sigma-Aldrich) with 10% FBS. After 2 days, the cells were removed and cultured in DMEM with 0.5% FBS for 24 h. On day 3, the cells were rinsed twice with PBS, and the medium was replaced with serum-free CSC medium with or without recombinant IL-13 (213-ILB, 2 ng/ml; R&D Systems). After 24 h, the conditioned media was collected from the VSMC culture dishes. The conditioned media was filtered through 0.2 μM filters (Corning) and frozen at −70 °C until use.
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8

Cytokine Priming of Pulmonary Cells

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PAECs were either pre-treated with 10 ng/mL transforming growth factor beta 2 (TGF-β2) (Peprotech, USA, #100-35B) and 1 ng/mL interleukin 1 beta (IL-1β) (R&D Systems, Minneapolis, MN, USA, 201-LB-005) or interleukin 13 (IL-13) (R&D, 213-ILB, 10 ng/mL) for designated time points. TGF-β2 was dissolved in distilled water containing 0.1% bovine serum albumin (BSA). IL-1β and IL-13 were dissolved in Phosphate-Buffered Saline (PBS) containing 0.1% BSA.
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9

Macrophage Polarization and Co-culture

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THP-1 (Human acute monocytic leukemia cell line) cells and L02 cells were purchased from ATCC. The cells were all cultured in RPMI 1640 containing 10% heat-inactivated FBS and 1% penicillin–streptomycin in a 5% CO2 atmosphere at 37 °C. THP-1 monocytes were differentiated into M0-like macrophages by incubation with 160 ng/ml phorbol 12-myristate 13-acetate (PMA, Sigma, P8139) for 48 h in RPMI medium. PMA-induced macrophages were polarized into M1 macrophages by incubation with 20 ng/ml of IFN-γ (R&D system, #285-IF) and 10 pg/ml of LPS (Sigma, #8630). Macrophage M2 polarization was obtained by incubation with 20 ng/ml of interleukin 4 (R&D system, #204-IL) and interleukin 13 (R&D system, #213-ILB). In the co-culture experiments, 0.5 × 106 THP-1 monocytes were cultivated and differentiated for 48 h before being incubated respectively with 0.5 × 106 L02-SCR or L02-Sh cells in 6-well Transwell plates for 48 h37 (link) .
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10

Stimulating HUVEC with IL-13 and STAT6 Inhibitor

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Human umbilical vein endothelial cells (HUVEC) were purchased from PromoCell (Heidelberg, Germany), and cultured in Dulbecco’s modified Eagle’s medium (DMEM) (Gibco, Carlsbad, CA, USA) with 10% (v/v) fetal bovine serum (FBS) (Gibco) and antibiotics (100 IU/mL penicillin and 100 mg/mL streptomycin) (Gibco). The A549 cell line was purchased from Cell Resource Center of Life Sciences (Shanghai, China), and cultured in Roswell Park Memorial Institute 1640 medium (RPMI 1640) (Gibco) containing 10% FBS (Gibco). HUVEC were treated with recombinant human IL-13 protein (50 ng/mL) (213-ILB, R&D systems, Minneapolis, MN, USA) and STAT6 inhibitor, AS1517499 (AS) (1 mM) (HY-100614, MCE, NJ, USA).
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