The largest database of trusted experimental protocols

5 protocols using hif 1a

1

Western Blot Analysis of Cellular Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total cell lysates were prepared in radio-immune precipitation assay (RIPA) buffer (Pierce Chemical Inc., Rockford, IL, USA) containing a cocktail of protease inhibitors (10 μg/mL aprotinin, 10 μg/mL leupeptin, and 10 μg/mL pepstatin, all from Sigma-Aldrich Chemical, St. Louis, MO, USA). Western blotting was performed according to standard protocols. In brief, protein samples were separated on 4–12% gradient gels and transferred using an iBlot transfer system (Life Technologies, Carlsbad, CA, USA), according to the manufacturer’s instructions. Membranes were blocked for non-specific binding in 5% non-fat dry milk and 1% goat serum TBS+Tween (TBST) buffer for 1 h at RT, incubated with primary antibodies for 1 h at RT and with HRP-conjugated secondary antibodies for 45 min at RT. The antibodies used for Western blotting were from R&D Systems, Inc., Minneapolis, MN, USA and included Hif-1A (monoclonal MAB1536, clone 241809), HSP 70 (monoclonal HSPA1A, clone 242707), SOD1 (polyclonal goat IgG AF3418), and GFP (polyclonal goat IgG AF4240). The membranes were washed in TBST, and antibody labeling of heat shock protein 70 (HSP 70), hypoxia inducible factor-1 alpha (Hif-1A), superoxide dismutase 1 (SOD1), and GFP was detected by chemiluminescence on X-ray films (Kodak, Rochester, NY, USA).
+ Open protocol
+ Expand
2

Western blot analysis of cell signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole-cell extracts were prepared in urea buffer (6 M urea, 100 mM sodium dihydrophosphate, 10 mM Tris pH 8). SDS-PAGE was performed using TGX gradient gels (Bio-Rad) and transferred onto PVDF (Millipore) using TransBlot SD semi-dry transfer apparatus (Bio-Rad) as per manufacturer's guidelines. The blots were probed with following antibodies: p21, p53, and PUMA (Santa Cruz), HIF-1a (R&D Systems), LC3 (Novus), PKM2 (Cell Signaling), p62 and tubulin (Sigma). Blot images were captured on ImageQuant LAS 4000 digital imaging system (GE Healthcare, Piscataway, NJ).
+ Open protocol
+ Expand
3

Protein Expression Analysis by Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole-cell extracts were prepared in urea buffer (6 M urea, 100 mM sodium dihydrophosphate, 10 mM Tris pH 8). SDS-PAGE was performed using TGX gradient gels (Bio-Rad) and transferred onto PVDF membranes (Millipore) using TransBlot SD semi-dry transfer apparatus (Bio-Rad). The blots were probed with following antibodies: HIF1a (R&D Systems), LC3 (Novus), and tubulin (Sigma). Blot images were captured on ImageQuant LAS 4000 digital imaging system (GE Healthcare).
+ Open protocol
+ Expand
4

Western Blot Analysis of HIF-1α Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed in radioimmunoprecipitation assay (RIPA) buffer supplemented with protease inhibitor. The protein concentration was determined using a BCA protein assay kit (Thermo Fisher Scientific, USA). Equal amounts of protein were subjected to electrophoresis on a 4–20% FuturePAGE gel (ACE Biotec, China) and then transferred to polyvinylidene fluoride (PVDF) membranes (Merck Millipore, Germany). The membranes were blocked with 7% nonfat milk and incubated with primary antibodies against HIF-1a (1:250, R&D, USA) and b-actin (1:1000, Abcam, UK) overnight at 4 °C. The PVDF membranes were then incubated with horseradish peroxidase (HRP)-conjugated secondary antibody at RT for 1 h. The protein bands on the PVDF membranes were observed using an enhanced chemiluminescence kit (Biosharp, China) and quantified using ImageJ.
+ Open protocol
+ Expand
5

Protein Expression Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
To prepare the protein extracts, the cells were rinsed twice with ice-cold PBS and harvested. After centrifugation, the cells were resuspended and extracted in lysis buffer (Thermo Fisher Scientific, Inc.) for 30 min on ice. Protein concentrations were assayed using Pierce Coomassie Plus reagent according to the manufacturer’s instructions, and 40 μg of protein was loaded for separation by sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS-PAGE). The proteins were then transferred to polyvinylidene difluoride membranes (Immobilon-P; EMD Millipore Corporation, Billerica, MA, USA). The membranes were blocked in Tris-buffered saline containing 5 % bovine serum antigen (BSA) and probed with HIF-1a, tissue inhibitor of metalloproteinase-2 (TIMP-2), VEGF-A, hepatocyte growth factor (HGF), matrix metalloproteinase (MMP)-2, and MMP-9 (all from R&D Systems Inc.) corresponding antibodies. Reacted bands were detected by horseradish peroxidase-conjugated secondary antibodies and enhanced chemiluminescence substrates (PerkinElmer, Boston, MA, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!