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Prc ods column

Manufactured by Shimadzu
Sourced in Japan

The PRC-ODS column is a high-performance liquid chromatography (HPLC) column designed for the separation and analysis of organic compounds. It features an octadecylsilyl (ODS) stationary phase, which provides efficient separation of a wide range of analytes. The core function of the PRC-ODS column is to facilitate the chromatographic separation and analysis of various organic compounds in complex samples.

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3 protocols using prc ods column

1

Purification and Characterization of Peptide Dendrimers

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Crude K-K2 peptide dendrimers were purified on a preparative reversed phase C18 column (Shimadzu, PRC-ODS column, 150×20 mm, 15 µ) using 0.1% TFA/water (solvent A) and 0.1% TFA/acetonitrile (solvent B). Linear gradient 5–60% B (Flow rate 6 mL/min over 27.5 minutes) was used for purification of the two peptide dendrimers. Analytical purity of purified BNT1 and BNTM was assessed by chromatography on a reversed phase C18 column (Microsorb, 15×4.6 mm, 15 µ) using 0.1% TFA/water (solvent A) and 0.1% TFA/acetonitrile (solvent B) and running a 5–45% linear gradient over 20 minutes at a flow rate of 1 mL/min. Dual Wavelength detector was set at 214/280 nm. The identities of peptide dendrimers were confirmed by electrospray ionization mass spectrometry (ESI-MS) at ICGEB, New Delhi. Experimental conditions used during ESI-MS of BNT1 and BNTM were solvent: 50% acetonitrile/0.1% formic acid, positive ionization mode, voltage settings (4 kilowatt) and instrument Orbitrap velos pro (Thermo Fisher Scientific).
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2

Characterization of Organic Compounds

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NMR spectra data were recorded on a Bruker ascend 600 spectrometer (Bruker, Karlsruhe, Germany) with TMS used as a reference. Optical rotations were measured on PerkinElmer Model 341 polarimeter (PerkinElmer, Waltham, MA, USA). UV spectrum data were acquired using HACH DR6000 UV-visible spectrophotometer (Hach, Loveland, CO, USA). IR spectra were recorded as KBr disks on PerkinElmer Spectrum 100 Series FT-IR spectrometers (PerkinElmer, Waltham, MA, USA). HRESIMS data were obtained on a LTQ Orbitrap XL™ Hybrid Ion Trap-Orbitrap FT-MS spectrometer (Thermo, Waltham, MA, USA). TLC was carried out on silica gel GF254 plates (Yantai Institute of Chemical industry, Yantai, China) and spots were visualized by UV light (254 and/or 365 nm) and spraying with 10% H2SO4 followed by heating. Column chromatography was carried out using silica gel (Qingdao Haiyang Chemical Co., Ltd., Qingdao, China), MCI gel (CHP-20P, 75–150 μm, Mitsubishi Chemical Corporation, Tokyo, Japan), ODS (35–70 μm, Grace, Maryland, MD, USA), and Sephadex LH-20 (GE Healthcare Bio-Science AB, Uppsala, Sweden) as packing materials. Semi-preparative HPLC was performed on a Shimadzu instrument (Shimadzu, Tokyo, Japan) coupled to CBM-20A system controller, LC-20AP pump, SPD-M20A Photodiode Array Detector and SIL-10AP autosampler and equipped with a Shimadzu PRC-ODS column (250 mm × 20 mm i.d., 15 μm).
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3

Solid-Phase Synthesis of 1P Precursor

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Synthesis of 1P: In order to synthesize the 1P percussor, we have used the standard solid phase peptide synthesis (SPPS) method. Initially 0.5 mmol/g of 2-chlorotrityl chloride resin were taken and activated, afterward the first amino acid was loaded. The capping regent (DCM:MeOH:DIPEA = 17:2:1) was used to protect the active sites of resins. The Fmoc group was removed by using a solution of 20% piperidine in DMF afterward the second Fmoc-protected amino acid was coupled to the free amino group using HBTU as the coupling reagent. By following the same procedure, the third amino acid was coupled and finally the amino acid chain was separated from the resin and purified using HPLC system. The HPLC system was consisted a Shimadzu PRC-ODS column with couple of LC-20AP pumps having SPD-20A UV/vis detector. The mobile phase used was acetonitrile and water with 0.1% of TFA. Supplemental Table S1 describes the HPLC condition used for the purification of 1P and 1, which were further characterized using ESI-MS.
Nap-Phe-Phe-Tyr-OH (1) was also synthesized using SPPS method as described above. The obtained peptide chain was purified and analyzed as described above.
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