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Superdex 200 prep grade

Manufactured by GE Healthcare
Sourced in Sweden

Superdex 200 prep grade is a size exclusion chromatography medium designed for the purification of proteins, peptides, and other biomolecules. It is composed of a cross-linked agarose and dextran matrix and is suitable for use in preparative-scale separations.

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6 protocols using superdex 200 prep grade

1

Purification of Tetanus Toxoid Monomer

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Example 7

Tetanus toxoid (TT) monomer was obtained by gel filtration chromatography before conjugation. One milliliter of a liquid preparation containing 4.5 mg/ml protein (as determined by the modified Lowry protein assay) was loaded onto a XK16-100 column filled with Superdex®200 Prep Grade (GE Healthcare Life Sciences, Uppsala, Sweden) equilibrated in PBS (20 mM NaHPO4 [pH 7.2], 150 mM NaCl) and eluted with the same buffer. The protein eluted from the column in two peaks: the earlier-eluting peak contained oligomerized toxoid, and the later-eluting peak, corresponding to a Mr of 150,000, contained TT monomer. Fractions corresponding to the later (monomer) peak were pooled, desalted against deionized water, concentrated using a Centricon® Plus-70 centrifugal filter device (30K Ultracel PL membrane; Millipore, Billerica, Mass.), and then lyophilized.

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2

Milk Protein Fractionation by SEC

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Casein micelle, BSA, β-LG, and α-LA fractions from raw milk were separated by SEC using a Superdex column (Superdex 200 prep grade, GE Life Sciences, Piscataway, NJ) connected to an AKTA fast-performance liquid chromatography unit (GE Life Sciences). The raw skim milk samples were loaded on the column and run using ice-cold PFS generated from the milk samples of the corresponding cow as mobile phase. The use of PFS during protein separation ensured that proteins were kept in their native state. The proteins were eluted using a 1.0 mL/min flow rate for 2 column volumes (240 mL total) and collecting 4-mL fractions. Protein elution was monitored using absorbance with a UV detector at 280 nm wavelength. Fractions were collected based on elution peaks corresponding to casein micelles, BSA, and β-LG and α-LA (based on SDS-PAGE analysis, see below), yielding 4 samples along with PFS as control. These samples were freeze-dried and stored at −40°C until liquid chromatography-mass spectrometry analysis.
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3

Superdex 200 Purification of Biotinylated Samples

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This biotin eluate (380 µL) was loaded onto a manually packed Superdex 200 Prep Grade (GE Healthcare) column (30 × 1 cm) and eluted with Buffer B using a flow rate of 0.1 mL/min. Fractions (500 µL) were collected and TO1-Dtb fluorescence was measured using a Spectramax M5 fluorescent plate reader (Ex/Em 495/535 nm, PMT at Medium) reading from the bottom of a 96-well plate (Greiner Bio-one).
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4

Purification and Characterization of E. coli Complex I

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The E. coli MWC215 (SmRndh:CmR) and mutant, NuoM E144A [33] (link) and NuoCD R274A [34] (link) strains were grown in LB medium at 37 °C in a 25 L fermenter and harvested at the late exponential growth phase. The membranes for Complex I purification were prepared by passing the cells through an APV Gaulin homogenizer. Then Complex I was purified by two consecutive chromatography steps using DEAE-Trisacryl M (Bio-Sepra) anion exchanger columns and gel filtration on Superdex 200 prep grade (GE Healthcare), respectively, as described [35] (link). DQ, decylubiquinone (Santa Cruz Biotechnology), and HAR, hexaammineruthenium (III) chloride, reductase activities of Complex I were measured as described previously [36] (link).
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5

Casein Micelle Isolation via SEC

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The raw skim milk was subjected to size exclusion chromatography to separate casein micelles using a gel filtration column (Superdex 200 prep grade, GE Life Sciences, Piscataway, NJ) connected to an AKTA fast-performance liquid chromatography unit (GE Life Sciences) using a previously reported method (Cheema et al., 2015) . Briefly, protein-free serum from the same animal was used as the mobile phase in size exclusion chromatography to ensure a native environment for the casein micelles. The protein-free serum was prepared by tangential flow cross-filtration of skim milk using a regenerated cellulose membrane with a 3-kDa molecular weight cut off (PLBC Prep scale TFF Cartridge, Millipore, Billerica, MA). The protein-free serum was preserved in 0.07% NaN 3 to prevent microbial growth and stored at 4°C until size exclusion chromatography. Two milliliters of raw skim milk was loaded onto the column and proteins were eluted using a flow rate of 1.0 mL/min for 2 column volumes (240 mL) and collected in 30-mL fractions. The elution of proteins was monitored using a UV absorbance detector set at 280 nm. A total of 4 replications were done for each sample. The casein micelle fractions were collected, freeze-dried, and stored at -20°C for the further analysis of the API by HPLC.
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6

Bacterial Expression and Purification of Respiratory Complexes

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Bacterial growth and purification of Complex I and ATP synthase. The E. coli MWC215 (Sm R ndh::Cm R ) strain was grown in LB medium at 37°C in a 25 L fermenter and harvested at the late exponential growth phase. The membranes for Complex I purification were prepared by passing the cells through an APV Gaulin homogenizer. Then Complex I was purified by two consecutive chromatography steps using DEAE-Trisacryl M (Bio-Sepra) anion exchanger columns and gel filtration on Superdex 200 prep grade (GE Healthcare), respectively, as described 16 . ATP synthase of E. coli was expressed and purified as described previously 17
Reconstitution. Purified Complex I was reconstituted into liposomes as previously described 18 except that azolectin was suspended in the buffer containing MOPS-BTP 100 mM, pH 7.0, n-dodecyl β-D-maltopyranoside (DDM) 0.4%, Na-cholate 0.1%. A ratio of 1:10 (w/w), of the enzyme to azolectin was used unless other specified. ATP synthase and ATP synthase/Complex I coreconstitution were performed in the same way.
Preparation of subbacterial vesicles. The vesicles were prepared as described in 19 , but vesicles were loaded with 100 mM MOPS-BTP, 7.2, 50 mM KCl and 1 mM MgSO 4 , frozen and stored at -80°C until use.
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