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4 protocols using l α phosphatidylinositol 4 5 bisphosphate pip2

1

Patch-Clamp Recordings with Rapamycin and ACh

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Rapamycin ready-made solution (2.74 mM in DMSO) and Acetylcholine (ACh) chloride were purchased from Sigma-Aldrich (St. Louis, MO, USA). ACh was dissolved in water to make a stock solution of 25 mM. The stock solutions were diluted in bath solution to the final concentrations required for patch-clamp recordings. L-α-phosphatidylinositol-4,5-bisphosphate (PIP2, natural from porcine brain) was purchased from Avanti Polar Lipids, (Alabaster, AL, USA) and prepared as previously described34 (link).
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2

Preparation of Lipid Vesicles with Defined Composition

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1,2-Dioleoyl-sn-glycero-3-phosphocholine (DOPC), l-α-phosphatidylinositol 4,5-bisphosphate (PIP2) (brain, ammonium salt), 1,2-dioleoylphosphatidylinositol 3,4,5-trisphosphate (PIP3) (ammonium salt), 1,2-dioleoyl-sn-glycero-3-phospho-l-serine (DOPS) and extruder accessories were purchased from Avanti Polar Lipids (Alabaster, AL). Texas Red® 1,2-Dihexadecanoyl-sn-Glycero-3-Phosphoethanolamine, Triethylammonium Salt (TR-DHPE) was purchased from Invitrogen (Carlsbad, CA). Calcium- and magnesium-free 150 mM NaCl and 20 mM HEPES buffer (pH = 7.4) were used in the preparation of the vesicle dispersion. Lipid stock solutions of desired compositions were prepared in chloroform and methanol (3:1, v/v) and stored in amber glass vials to protect them from UV light. For each experiment, phospholipids were spread on the walls of a round-bottomed flask, and evacuated in a desiccator for at least two hours to produce an even lipid film. The lipid film was rehydrated, sonicated for 40 min, freeze-thawed 4 times and then extruded at room temperature 17 times through a polycarbonate filter with 50 nm pores. The resulting small unilamellar vesicles (SUVs) were stored at 4°C.
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3

Visualizing Protein-Induced Liposome Deformation

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Large unilamellar vesicles were prepared as described before [11 (link), 12 (link)]. Briefly, L-α-phosphatidylcholin (PC), L-α-phosphatidylethanolamine (PE), L-α-phosphatidylserine (PS) and L-α-Phosphatidylinositol-4,5-bisphosphate (PIP2) were obtained from Avanti Polar Lipids (Alabaster, AL).
To observe the protein-induced deformation of LUVs (as described before [13 (link), 14 (link)]), liposomes (0.2 mg/ml) were incubated with ENTH domain or it’s mutants (15 µM) at 30 °C for 3 h. The samples were subsequently diluted to 0.2 mg/ml of liposomes with HEPES buffer (200 mM NaCl, 10 mM HEPES/NaOH, pH 7.4) and 5 µl of the suspension was then transferred onto a formvar carbon coated copper grid (Agar Scientific Ltd., Essex, UK) and incubated for 1 min at room temperature. The suspension was removed and the grid was set onto a droplet (50 µl) of 3% uranyl acetate for negative staining.
Electron microscopic visualization was performed with a JEOL JEM 1011 transmission electron microscope (JEOL Ltd., Akishima, Japan) and a Gatan Orius 1000 CCS detector (Gatan Inc., Pleasanton, USA).
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4

Protein-Induced Deformation of Liposomes

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Large unilamellar vesicles were prepared as described before 31, 32 . Briefly, L-αphosphatidylcholin (PC), L-α-phosphatidylethanolamine (PE), L-α-phosphatidylserine (PS) and L-α-Phosphatidylinositol-4,5-bisphosphate (PIP2) were obtained from Avanti Polar Lipids (Alabaster, AL).
To observe the protein induced deformation of LUVs (as described before 33, 34 ), liposomes (0.2 mg/ml) were incubated with ENTH domain or it's mutants (15 µM) at 30°C for 3 h. The samples were subsequently diluted to 0.2 mg/ml of liposomes with HEPES buffer (200 mM NaCl, 10 mM HEPES/NaOH, pH 7.4) and 5 µl of the suspension was then transferred onto a formvar carbon coated copper grid (Agar Scientific Ltd., Essex, UK) and incubated for 1 min at room temperature. The suspension was removed and the grid was set onto a droplet (50 µl) of 3% uranyl acetate for negative staining. Electron microscopic visualization was performed with a JEOL JEM 1011 transmission electron microscope (JEOL Ltd., Akishima, Japan) and a Gatan Orius 1000 CCS detector (Gatan Inc., Pleasanton, USA).
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