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Lds page sample buffer

Manufactured by Thermo Fisher Scientific

LDS-PAGE sample buffer is a laboratory reagent used to prepare protein samples for electrophoresis analysis. It is designed to denature and solubilize proteins, allowing for their separation and detection in a polyacrylamide gel.

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4 protocols using lds page sample buffer

1

Purification and Characterization of GST-Tagged Proteins

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GST-tagged proteins were expressed in Escherichia coli BL21. The BL21 cells were grown to an OD600 of 0.6; expressed protein was induced with isopropyl-β-d-thiogalactoside (IPTG) to a final concentration of 1 mM at 25°C for 4–6 hr. The bacterial pellets were resuspended in lysis buffer (1x TBS supplemented with 1% Triton, 1 mM EDTA, 1 mM PMSF, and cOmplete protease inhibitor cocktail tablets). After sonication and centrifugation, the crude extract was purified using Glutathione-Sepharose 4 Fast Flow beads (GE Healthcare). Mouse brains were homogenized in Binding Buffer (25 mM HEPES, 10 mM NaCl, 0.01% Triton, 5% Glycerol, 1 mM DTT, pH7.5, and cOmplete protease inhibitor cocktail tablets). The homogenates were centrifuged at 15,000 × g for 20 min. HEK293T cells were lysed in Binding Buffer and centrifuged at 15,000 × g for 20 min. The supernatant was carefully collected. GST beads coated with GST, GST-SNPH, or its truncated mutants were mixed with the brain homogenate or HEK293T cell supernatants and incubated for 3 hr with gentle agitation. The beads were then extensively washed with 1x TBS supplemented with 0.1% Triton. Next, the beads were dissolved in LDS-PAGE sample buffer (Thermo Fisher Scientific) and heated at 75°C for 10 min. Proteins were resolved by Bis-Tris NuPAGE and processed for immunoblot analysis or Coomassie Blue Staining.
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2

Purification and Characterization of GST-Tagged Proteins

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GST-tagged proteins were expressed in Escherichia coli BL21. The BL21 cells were grown to an OD600 of 0.6; expressed protein was induced with isopropyl-β-d-thiogalactoside (IPTG) to a final concentration of 1 mM at 25°C for 4–6 hr. The bacterial pellets were resuspended in lysis buffer (1x TBS supplemented with 1% Triton, 1 mM EDTA, 1 mM PMSF, and cOmplete protease inhibitor cocktail tablets). After sonication and centrifugation, the crude extract was purified using Glutathione-Sepharose 4 Fast Flow beads (GE Healthcare). Mouse brains were homogenized in Binding Buffer (25 mM HEPES, 10 mM NaCl, 0.01% Triton, 5% Glycerol, 1 mM DTT, pH7.5, and cOmplete protease inhibitor cocktail tablets). The homogenates were centrifuged at 15,000 × g for 20 min. HEK293T cells were lysed in Binding Buffer and centrifuged at 15,000 × g for 20 min. The supernatant was carefully collected. GST beads coated with GST, GST-SNPH, or its truncated mutants were mixed with the brain homogenate or HEK293T cell supernatants and incubated for 3 hr with gentle agitation. The beads were then extensively washed with 1x TBS supplemented with 0.1% Triton. Next, the beads were dissolved in LDS-PAGE sample buffer (Thermo Fisher Scientific) and heated at 75°C for 10 min. Proteins were resolved by Bis-Tris NuPAGE and processed for immunoblot analysis or Coomassie Blue Staining.
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3

Protein Extraction and Quantification

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Cells were washed with PBS and lysed with ice-cold lithium dodecyl sulfate (LDS)-PAGE sample buffer (Invitrogen) containing 250 U/μl benzonase (Accelagen), 1 μg/ml pepstatin A, 5 μg/ml leupeptin, 1 mM phenylmethylsulfonyl fluoride, 10 mM sodium fluoride, and 5.4 mM sodium orthovanadate for 10 min on ice. β-Mercaptoethanol was then added to a final concentration of 0.36 M at 95°C for 5 min, followed by centrifugation at 20,000 × g at 4°C for 10 min. Protein concentrations were determined using the Pierce 660-nm protein assay reagent containing ionic detergent compatibility reagent and read at 660 nm in a SpectraMax M2 plate reader.
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4

Cell Lysis and Protein Quantification

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Cells were washed with Hank’s balanced salt solution (HBSS) and lysed with ice-cold lithium dodecyl sulfate (LDS)-PAGE sample buffer (Invitrogen) containing 250 U/μL benzonase (Accelagen), 1 μg/mL pepstatin A, 5 μg/mL leupeptin, 1 mM phenylmethylsulfonyl fluoride, 10 mM sodium fluoride, and 5.4 mM sodium orthovanadate for 10 min on ice. β-Mercaptoethanol was then added to a final concentration of 0.36 M. Lysates were incubated at 95°C for 5 min and then clarified by centrifugation at 20,000 × g at 4°C for 10 min. Protein concentrations were determined using the Pierce 660-nm protein assay reagent containing ionic detergent compatibility reagent and read at 660 nm in a SpectraMax M2 plate reader (Molecular Devices).
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