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45 protocols using daniovision observation chamber

1

Larval Zebrafish Behavior Tracking

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After exposure for 5d in beakers, larval zebrafish were individually transferred into a 96-well culture plate and placed in a Noldus DanioVision Observation Chamber (Noldus Information Technology, Netherlands). For each treatment, 24 fish were assessed for behavior in mid-afternoon. After being acclimated at 26 C the instrument for 2h, the activities of fish were recorded by an infrared analog camera within the Danio Vision observation chamber, and the resulting video was collected and analyzed using the EthoVision software version 12.0 (Noldus Information Technology, Leesburg, VA). Larvae were tracked following a standard 50 min "white light routine" of alternating 10 min periods of light and dark beginning with a dark period (i.e. dark photokinesis). Analysis profiles were generated in EthoVision for distance moved and activity (i.e. percent pixel change across wells over time with an activity threshold of 16 to remove background noise) and an excel file was exported for further analysis.
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2

Zebrafish Larval Locomotor Activity

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After continuous exposure to the aforementioned treatments for 144 hpf (6 days), the zebrafish larvae were transferred to a 96-well plate (one fish per well). Subsequently, the plate was placed inside the DanioVision™ observation chamber (Noldus Information Technology, Leesburg, VA) for 30 minutes in the dark at 28.5°C. Then the light source inside the DanioVision observation chamber was turned on for 2 hours and the total distance traveled by each larva was tracked during dark and light periods by EthoVision® XT video tracking software (Noldus Information Technology, Leesburg, VA).
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3

Daphnia magna Behavioral Assay

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Behavioral tests were conducted using a DanioVision observation chamber (Noldus, Wageningen, Netherlands). According to the method of a previous study [23 (link)], 10 D. magna F0 or F1 generations were selected from each exposure treatment. A 48-well plate was used for detection, with one D. magna in each well filled with 1 mL of exposure solution. The test program was set for 35 min, including 5 min of dark acclimation and three 10-min light-and-dark cycles, which consisted of 5 min of light and 5 min of darkness. Movement traits, heat maps, and swimming speed were analyzed using EthoVision XT 15 video tracking software (Noldus, Wageningen, The Netherlands).
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4

Larval Zebrafish Behavioral Assay

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Larval activity was assayed at 4 days post fertilisation (dpf) using the DanioVision Observation Chamber (Noldus), which was fitted with a Basler GenICam camera, independent light source, temperature control unit (set to 28.5 °C) and tapping device. Individual embryos were placed in each well of a 96-well tray in pre-warmed embryo medium, then placed in a dark incubator set to 28.5 °C to acclimatise for at least 30 min before behavioural testing. The settings used for tracking experiments were defined using EthoVisionXT software (Version 11.5). Briefly, zebrafish were in darkness for 5 min, then subjected to two maximum intensity taps 10 s apart. After a delay of 1 min, the lights were switched on and zebrafish were assayed in light at 50% intensity for a further 3 min before the trial ended. Trials were run in triplicate and wells where tracking failed were excluded from analysis.
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5

Evaluating PNP Impact on Larval Behavior

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To evaluate the potential effects of ingested PNPs on behaviour, B. mori larvae were exposed to PNPs for 10 days and an equal number of larvae were reared as controls.
Control and PNP-exposed larvae were subjected to an alternating dark/light test (8 min) and a chemotaxis test (5 min) and filmed by an infrared camera (sample rate of 6 frames/second) using the DanioVision™ observation chamber (Noldus Inc., Wageningen, The Netherlands). The evaluation of chemotaxis defects was performed by a single odour assay by using 20 µL of mulberry leaves extract as olfactory stimulus that was produced by mixing the artificial diet powder with distilled water (4 ml of water each gr of powder) followed by centrifugation at 10,000 × g for 5 min and supernatant recovery. The motion of single larvae exposed to the odour source was recorded during the entire duration of the trial (5 min with light on). The EthoVision XT ® software (Noldus Inc., Wageningen, The Netherlands) was used to elaborate several parameters for behavioural quantification (total mobility, time course of distance to odour source). Measurements have been performed on groups of at least 6 larvae.
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6

Zebrafish Locomotor Activity Assay

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To assess the locomotor activity of zebrafish larvae from 3 to 5 dpf, locomotor activity assays were performed using an infrared camera system (DanioVision™ Observation chamber, Noldus) and the using EthoVision® XT software (Noldus). Control (n = 24) and hexb−/− (n = 24) zebrafish larvae, in 48 well plates, were subjected to two different light/dark routines. The White Light routine consisted of a 30 min habituation period, followed by 4 cycles of 15 min of light (100%)/ 15 min darkness 15 (2.5 hr total). The Dawn routine 30 min habituation in the dark (0% light intensity), followed by the routine described in Table 3 and comprised 3 hr 12 min. Each experiment was performed twice for the three ages (3, 4, and 5 dpf) with n = 24 controls, and n = 24 mutants per experiment. Distance traveled (mm) per second was measured.
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7

Anxiety-like Behavior Assay in Larval Zebrafish

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We used a repeated light dark challenge assay (Emran et al., 2008 (link); Figure 1C) in order to elicit an anxiety-like response (Steenbergen et al., 2011 (link)). At 124 hpf (5 hZT at 5 dpf), the 24 well plate with each well containing a larval zebrafish, was placed in a DanioVision™ observation chamber (Noldus Inc., Wageningen, Netherlands), equipped with IR illumination from beneath the plate and an IR sensitive camera filming from above at 30 fps in a 1280 × 960 pixel resolution. After an initial acclimation period of 10 min in the illuminated chamber, video tracking was initiated for another 10 min before the larvae were subjected to a dark challenge phase of 5 min and another light challenge phase of 10 min. This challenge chain of dark and light phases was repeated three times, thus resulting in six alternating dark and light phases (Figure 3).
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8

Behavioral Analysis of Zebrafish Larvae

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Behavioral tests of zebrafish larvae treated with dithianon were performed in the 6 dpf stage [32] (link). Before the testing day, each larva was transferred to an individual well of a 24-well plate with 2 mL of E3 medium and incubated at 28.5 • C for 16 h. The 24-well plate was placed in a Danio Vision Observation Chamber (Noldus Information Technology, Wageningen, The Netherlands), and a light-dark transition test was conducted using a high-quality video tracking system with a 5 min acclimation period in the dark and six alternating cycles of 5 min intervals of light and dark stimuli. Larval locomotor activity was tracked using EthoVision XT 14 software (Noldus). Data points were exported to Microsoft Excel to generate graphs.
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9

Larval Zebrafish Behavioral Assay

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Larvae were placed in 96-well plate with 200 μL of embryonic media. Behavioral analysis following light/dark stimuli was used by DanioVision Observation Chamber with EthoVision XT 15 (Noldus, The Netherlands). Larvae in 96-well plate were acclimated to the dark for 20 min and stimulated to six cycles of 10 min of light and dark, respectively. Locomotor patterns following stimuli were represented as distance moved (mm) per 1 min. Locomotor activities were represented as percentage of control group during each stimuli for 10 min (n = 12, triplicates).
Larvae were placed in a 2-channel (blue and yellow) chamber with 10 mL embryonic media. Twenty larvae per group were recorded for 30 min by a digital camera (HDR-CX130, Sony, Japan) mounted 50 cm above the apparatus. Images were acquired from recorded movie per 2 min. Then, each color preference was calculated as a mean of channel in which larvae were located in the acquired images.
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10

Zebrafish Larval Locomotor Behavior

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Locomotor behavior was assessed at 120 hpf in larvae with the visual motor response using Noldus Danio vision Observation Chamber following exposure to NG (214, 250, or 285 μg/ml), NG + TT (143, 172, or 200 μg/ml), or TT (0.8, 0.9, or 1.0 μg/ml) for 4 to 120 hpf. Each treatment group within a biological replica consisted of twenty-four larvae (subsamples). Following a 10 min dark acclimation period, the Noldus white light routine was used to test visual motor response by exposing larvae to 10 min intervals by alternating light and dark periods for 50 min in a previous study [20 (link)]. Statistical analysis was evaluated using ANOVA on SAS Statistical Software (SAS Institute Inc., Cary, NC) to determine differences among groups by phase (α = 0.05).
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