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8 protocols using p glycoprotein

1

Immunofluorescence Staining of 3D Spheroids

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Spheroids were transferred to ULA plates, washed three times in PBS and fixed with 4% PFA for 1 hour at 4 °C. Spheroids were washed again then permeabilized with 0.5% Triton X-100 in Tris-Buffered Saline with 0.05% Tween20 (TBST) overnight at 4 °C and then blocked with 0.1% Triton X-100/3% BSA in TBST for 2 hours at room temperature (RT). Primary antibodies Multidrug resistance protein-2 (MRP2-Abcam) and P-glycoprotein (Pgp-Abcam) were diluted 1 : 20 in 0.1% Triton X-100/1% BSA in TBST were incubated with the spheroids overnight at 4 °C. Spheroids underwent three 1 hour washes with 1% Triton X-100 in TBST then incubated with secondary Alexa Fluor 488 Donkey Anti-Mouse antibody (Life Technologies) diluted 1 : 1000, Hoechst diluted 1 : 5000 and Phalloidin 568 diluted 1 : 250 in 0.1% Triton X-100/1% BSA in TBST overnight at 4 °C. Spheroids were finally washed for 1 hour then mounted with Prolong Gold (Life Technologies) onto a glass microscope slide. Maximum intensity projection images of spheroids were taken using a Zeiss Axio Observer microscope with Apoptome using 40× oil objective.
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2

Modeling Blood-Brain Barrier Interactions

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hCMEC/D3 were obtained from Dr. Peter Couraud59 (link) INSERM, France. WntC59 was purchased from AdooQ Biosciences (Irvine, CA). Human Recombinant Wn3a, and GF120918 (GF) were purchased from R&D Systems (Minneapolis, MN). Rhodamine 800 and Rhodamine 123 were purchased from Sigma (St. Louis, MO). IRDye 800 CW PEG were purchased from LICOR (Lincoln, NB). EBM-2 media was purchased from Lonza (Walkersville, MD). The E-plates for RTCA were obtained from ACEA Biosciences (San Diego, CA). Transwell and tissue culture plates were purchased from Corning (Tewksbury, MA). Trizol and tetramethylrhodamine BSA was purchased from Life Technologies (CA, USA). P-glycoprotein and Claudin-1 antibodies were purchased from Abcam (Cambridge, MA). β-catenin, claudin-5 and β-actin antibodies were purchased from Sigma (St. Louis, MO). Human fetal brain total RNA was purchased from Takara Bio USA, Inc. (Madison, WI). Primers were obtained from Invitrogen (CA, USA) and primer sequence information is provided in Table 1 Supplementary information.
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3

Antibodies and Reagents for Cellular Analysis

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cis-Diammineplatinum (II) dichloride was purchased from Sigma-Aldrich (St. Louis, MO, USA; P/N: P4394). Antibodies against β-catenin, GSK3β and β-tubulin were purchased from Cell Signaling Technology, Inc. (Danvers, MA, USA). The antibody against PPP2AB56α was purchased from ProteinTech (Chicago, IL, USA) (P/N: 12675-2-AP). Antibodies against MRP1, ABCG2, P-glycoprotein and topoisomerase IIβ were obtained from Abcam (Cambridge, MA, USA). The antibody against EZH2 was purchased from OriGene (Rockville, MD, USA).
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4

Protein Expression Analysis in Liver and Ileum

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Liver and terminal ileum tissue samples were homogenized in RIPA (Beyotime Biotechnology, China), respectively. The total protein concentrations of the homogenates were measured with BCA reagent (BOSTER, China). An equal amount of protein was subjected to sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to polyvinylidene difluoride membranes by electroblotting. After blocking, the membranes were incubated with primary antibodies directed against human CYP1A2, CYP3A4, CYP2C9, P-glycoprotein, and GAPDH (Abcam, UK). Software ImageJ was used to analyze the Gray scale of the obtained images:
Gray value of each protein = gray value of target protein/gray value of internal reference protein.
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5

Inhibition of Oncogenic Pathways

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Doxazosin mesylate, crizotinib, capmatinib, tepotinib, osimertinib and lazertinib were purchased from Selleckchem (Radnor, PA). Amivantamab was obtained from MedchemExpress (Monmouth Junction, NJ). Triton X-100, propidium iodide, PBS tablet, dimethyl sulfoxide (DMSO) and cOmplete™ protease inhibitor cocktail were obtained from Sigma-Aldrich (St. Louis, MO). The immunoblotting and immunostaining antibodies utilized were obtained as follows: c-MET, phospho-c-MET (Y1234/1235), EGFR, phospho-EGFR (Y1068), MEK, phospho-MEK (S217/221), AKT, phospho-AKT (S473), cleaved caspase-3 (Asp175), cleaved caspase-7 (Asp198), cleaved caspase-8 (Asp391), PARP, JAK2, CD44, OCT4 and SOX2 (Cell Signaling Technology, Beverly, MA); phospho-JAK2 (Y1007/1008), STAT3, phospho-STAT3 (Y705) and P-glycoprotein (Abcam, Cambridge, MA); survivin, cyclin D1 and ALDH1A1 (Santa Cruz Biotechnology, CA); GAPDH (Invitrogen, Carlsbad, CA). The secondary antibodies used were HRP-conjugated anti-rabbit and mouse IgG (Bio-Rad Laboratories Inc, CA) and Alexa Fluor-488 or -594 goat anti-mouse and rabbit IgG (Invitrogen).
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6

Apoptosis Pathway Regulation Assay

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G-Rh2 (purity ≥98%) was purchased from Sigma-Aldrich; Merck KGaA (Darmstadt, Germany) and dissolved in dimethylsulfoxide (DMSO; Sigma-Aldrich; Merck KGaA). Primary antibodies against Bcl-2, Bax, caspase-3, and P-glycoprotein (P-gp) were obtained from Abcam (Cambridge, UK). Smad4 and GAPDH were obtained from Cell Signaling Technology, Inc. (Danvers, MA, USA).
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7

ATO and YC-1 Anticancer Protocol

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Clinical grade ATO was purchased from ShuangLu Pharmaceuticals (Beijing, China). A stock solution of ATO (1 mM in phosphate-buffered saline (PBS)) was prepared and stored at 4°C. YC-1 [3-(5′-hydroxy-methyl-2′furyl)-1-benzylindazole] was purchased from Cayman and dissolved in dimethyl sulfoxide (DMSO). DMSO was added to culture at 0.1% (v/v) as a vehicle control for YC-1 administration. Primary antibodies for HIF-1α, Pglycoprotein, VEGF, Ki67, CD31 and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) were obtained from Abcam.
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8

Molecular Mechanisms of ATO and YC-1 in Cancer

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Clinical grade ATO was purchased from ShuangLu Pharmaceuticals (Beijing, China). A stock solution of ATO (1 mM in phosphate-buffered saline (PBS)) was prepared and stored at 4°C. YC-1 [3-(5′-hydroxymethyl-2′-furyl)-1-benzylindazole] was purchased from Cayman and dissolved in dimethyl sulfoxide (DMSO). DMSO was added to culture at 0.1% (v/v) as a vehicle control for YC-1 administration. Primary antibodies for HIF-1α, P-glycoprotein, VEGF, Ki67, CD31 and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) were obtained from Abcam.
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