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Caspase 3

Manufactured by Bioworld Technology
Sourced in United States

Caspase-3 is a laboratory equipment used for the detection and measurement of the enzyme caspase-3. Caspase-3 is a key executioner protein involved in the process of apoptosis, or programmed cell death. This equipment allows for the quantification of caspase-3 activity in various biological samples, providing insights into cellular mechanisms and processes.

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8 protocols using caspase 3

1

Immunoblotting of Apoptosis Markers

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For the immunoblotting of P53, Bcl-2, Bax, and caspase-3, proteins were extracted from whole cell lysates using RIPA buffer (Cell Signaling) following manufacturer's instructions. For the immunoblotting of Cytochrome c and Smac, cytoplasmic proteins were extracted using NE-PER Nuclear Protein Extraction Kit (Thermo Fisher). The proteins separated by SDS gel were transferred to 0.22 μm PVDF membrane (Bio-Rad) at 15 V for 2 h by using semidry transfer set (CBS Scientific). After blocking the membranes with 5% nonfat dry milk in Tris-buffered saline with Tween (TBST) (150 mM NaCl, 15 mM Tris-HCl (pH 7.5), and 0.1% Tween 20) for about 2 h, proteins were probed with primary antibody against Bcl-2 (Bioworld), caspase-3 (Bioworld), P53 (Bioworld), Bax (Bioworld), Smac/Diablo (Cell Signaling), Cytochrome c (Cell Signaling), or β-actin antibody (Santa Cruz) and then incubated with a secondary antibody conjugated with horseradish peroxidase (Cell Signaling). Membranes were washed by TBST after each antibody probing. Signals were detected by using Super Signal West Pico chemiluminescent substrate (Thermo Scientific). Integrated optical density (IOD) quantification was performed using Gel-Pro Analyzer 4.0.
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2

Western Blotting Analysis of Histone Proteins

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Six mice of NaB- and Veh-treated groups were used for western blotting. Mice were killed by cervical dislocation and the cortex and the hippocampus were quickly dissected. Histone protein and total protein were prepared from both tissues as previously described, respectively (Shechter et al., 2007 (link); Li et al., 2011 (link)). Purified proteins were separated on SDS-PAGE and quantified using Odyssey LI-COR. GAPDH (1:5000, Bioworld, St. Louis Park, MN, USA) was used as loading control. Commercial primary antibodies used include Acetylated Histone 3 (Ac-H3; 1:2000, Upstate Biotechnology, Merck Millipore, Darmstadt, Germany), Histone 4 (1:1000, Bioworld, St. Louis Park, MN, USA), Tau-P (phospho S199 + S202; 1:1000, Abcam, Cambridge, UK), Caspase 3 (1:500, Bioworld, St. Louis Park, MN, USA), cleaved Caspase 3(1:100, chemicon, Merck Millipore, Darmstadt, Germany), Bcl-2 (1:500, Bioworld, St. Louis Park, MN, USA) and glial fibrillary acidic protein (GFAP; 1:500, ZSGB-Bio, Beijing, China). Secondary antibodies used included anti-Mouse IRDye 800CW and anti-Rabbit IRDye 800CW (1:5000, Li-Cor Biosciences, Cambridge, UK).
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3

ZnO Nanoparticle Cytotoxicity Evaluation

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ZnO NPs were obtained from HT Nano Company (Nanjing, China). Dulbecco's modified Eagle's medium/nutrient mixture F12 (DMEM/F12) was purchased from Invitrogen (Carlsbad, CA, USA). Fetal bovine serum (FBS) was obtained from PAA (Pasching, Austria). 3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), N-acetylcysteine (NAC), and 2′,7′-dichlorodihydrofluorescein diacetate (H2DCFDA) were obtained from Sigma-Aldrich (St. Louis, MO, USA). SP600125 and SB203580 were obtained from Beyotime (Shanghai, China). U0126 was obtained from Promega (Madison, WI, USA). Bicinchoninic acid (BCA) protein assay kit was obtained from Pierce (Rockford, IL, USA). Annexin V-FITC apoptosis kit was purchased from Abcam (Mountain View, CA, USA). Bcl-2, Bax, JNK, ERK1/2, p38 MAPK, phosphor-JNK, phosphor-ERK1/2, phosphor-p38, and caspase-3 antibodies were purchased from Bioworld (St. Louis Park, MN, USA); poly(ADP-ribose) polymerase-1 (PARP) was purchased from Cell Signaling Technology (Boston, MA, USA); β-actin and secondary antibodies (goat anti-mouse or anti-rabbit IgG-conjugated horseradish peroxidase (HRP)) were purchased from Beyotime (Shanghai, China).
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4

Western Blot Analysis of Apoptosis Markers

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Protein concentrations were measured using BCA kit (Beyotime). Equal amounts of proteins were subjected to 10-15% SDS-PAGE and transferred to NC membrane. Antibodies against ST6Gal-I (Abcam, 1:500), p38, pp38, caspase-3 or GAPDH (Bioworld, 1:300, 1:300, 1:400, 1:10,000), Bcl-2, Bax, Bad or PARP (Sangon, 1:500), ctochrome c or caspase-9 (Proteintech, 1:500) were used as the primary antibodies. The detection was performed using ECL kit. Densitometry of proteins was analyzed with Gel-Pro software.
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5

Protein Expression Analysis of Exosomes

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Cells, exosomes, and tissues were lysed in RIPA buffer. Protein concentration was determined using the BCA assay kit (Pierce, USA). Sources and dilution factors of primary antibodies were: rabbit polyclonal CD63 (1:1000; Bioworld, USA), CD9 (1:1000; Bioworld), CD81 (1:1000; Epitomics, USA), PCNA (1:1000; Bioworld), BCL-XL (1:100; SAB, USA), BCL-2 (1:1000; Bioworld), Bax (1:1000; Bioworld), Cytochrome C (1:500; Abcam, USA), caspase-3 (1:500; Bioworld), IL-1β (1:500; Bioworld,), LC3B (1:500; Abcam), Beclin-1 (1:600; Proteintech, USA), mTOR (1:500; SAB), p-mTOR (1:500; SAB), 4EBP1 (1:200; SAB), p70S6K (1:200; SAB), and mouse monoclonal GAPDH (1:3000; Kang Chen, China). The nucleoprotein and plasma protein was separated by the nuclear and plasma protein isolation kit (Vazyme, China), with the primary antibody NF-kB-P65 in the nucleus (1:500; SAB), primary antibody nucleoprotein Histone (1:1000; SAB). After incubation with the primary antibodies overnight at 4 °C, membranes were washed three times with Tris-buffered saline with 0.05% Tween-20 and challenged with HRP-conjugated goat anti-rabbit or goat anti-mouse antibody (1:2000; Bioworld). Western blot was performed by Luminata™ crescendo western HRP substrate (Millipore, USA) and analyzed using MD Image Quant Software.
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6

Mouse Heart Protein Analysis

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Proteins were extracted in a RIPA buffer from the whole mouse heart, and an equal number of proteins (30 μg) from each sample was separated by SDS-PAGE and was transferred onto a PVDF membrane (Merck Millipore). The membrane was blocked and incubated with primary antibodies (Bax, Bcl-2 from Cell Signaling Technology; caspase 3 from Bioworld) overnight at 4°C, followed by corresponding horseradish peroxidase-conjugated secondary antibodies (Jackson Laboratory). The blots were visualized with enhanced chemiluminescence and were quantified by densitometry.
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7

Serratia marcescens Metabolite Regulation

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Antibodies used in this study were anti PERK (Cell Signaling, D11A8), IRE1α (Cell Signaling, 14C10), Bcl-2 (Cell Signaling, D55G8), Bip (Cell Signaling, C50B12), CHOP (Cell Signaling, L63F7), Bax (Cell Signaling, D2E11), caspase3 (Bioworld, BS6428), caspase9 (Bioworld, BS1731), β-Actin (Signaling, 8H10D10), Anti-GAPDH (Genomics, 5A12), and anti-Alexa Fluor 488 Labeled Goat Anti-Rabbit IgG (H+L) (Biyuntian, A0423). All these antibodies were purchased from Shanghai Biyuntian Biological Company. PG was isolated from Serratia marcescens, strain WA12-1-18, in the intestinal tract of cockroaches. The metabolite was extracted using 3.0 g/L of PBS from previously described [10 (link)]. Flou3-AM fluorescent probe, PVDF membrane, (2-(4-Amidinophenyl)-6-indolecarbamidine dihydrochloride) DAPI, TUNEL apoptosis kit, and ECL kits were purchased from Shanghai Biyuntian Biological Company (Shanghai, China), whereas 4-PBA was purchased from Sigma Aldrich Company (St. Louis, MI, USA). A fluorescent quantitative PCR kit was purchased from Thermo Fisher Scientific (Waltham, MA, USA). Cell cycle and apoptosis kits were purchased from Beijing Sizhengbai Biotechnology Company (Beijing, China).
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8

Isoflurane-Induced Neuronal Apoptosis Analysis

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The brain tissues were immediately removed and stored in -80℃ after anaesthesia . The frontal cortex were homogenized with lysis buffer containing 1% protease and phosphatase inhibitor cocktail (Thermo scienti c, USA) on ice for 30 min. For the in vitro experiments, lysis buffer was added to six-well plates seeded with U251 cells or primary neurons immediately after 6-h iso urane exposure. Protein concentration was measured using a BCA protein assay kit (Thermo Scienti c, USA) and then each sample (25 μg) was separated by SDS-PAGE gel. Rabbit primary antibodies against STAT3 (1:1000; Epitomics, USA), Tyr705-phosphorylated STAT3 (pY705-STAT3, 1:1000; Epitomics), Bcl-xl (1:1000; Epitomics), survivin (1:1000; Epitomics), Mcl-1 (1:1000; Epitomics), cytochrome C (1:1000; Abcam, USA), MnSOD (1:1000; Abcam), activated caspase-3 (1:500; Bioworld), caspase-3 (1:500; Bioworld), Bim (1:1000; Epitomics), ubiquitin (1:1000; Thermo scienti c, USA) and loading control GAPDH (1:2500; Bioworld) was used. GeneTools image analysis software was used for densitometric analysis of immunoblots.
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