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2 protocols using anti c myc

1

Biochemical Analysis of MCOLN1 Regulation

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All chemicals were of an analytical grade and, unless otherwise noted, from Sigma-Chemical or Fisher Scientific. [γ-32P]ATP (specific activity 3000 Ci/mmol) was from PerkinElmer. The MCOLN1 peptides (RRKCGRDPSEEHSLLVN, RRKCGRDPAEEHALLVN, RRKCGRDPAEEHSLLVN, RRKCGRDPSEEHALLVN) were synthesized by the UNC High-Throughput Peptide Synthesis and Array Facility. MHY1485 was synthesized and the compound identity was verified by LC–MS and NMR, in-house at North Carolina Central University, as previously described [35 (link)]. The antibodies used were as follows: anti-LC3 [1:1000 (in milk); MBL International], anti-c-Myc [1:40 dilution for 1 mg/ml lysate for immunoprecipitation (IP); Developmental Studies Hybridoma Bank, University of Iowa], anti-α-tubulin (clone B-5-1-2; Sigma–Aldrich) and anti-GFP (A11122 for IP and A6455 for Western; Molecular Probes). pEGFPC2-MCOLN1 [full-length, wild-type (WT), human and cloned into the EcoRI and SalI sites] was a generous gift from R. Puertollano (National Institute of Health, Bethesda, Maryland) and is as previously described [36 (link)]. The myc-TOR, kinase-dead (KD) myc-TOR and RFP-LC3 plasmids were from Addgene.
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2

Antibody Staining Immunofluorescence Protocol

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Mouse monoclonal anti-hemagglutinin (HA) antibody was from BioLegend (Clone 16B12, Cat. No. 901513). Polyclonal GFP antibody was from Novus Biologicals (Cat. No. NB600-308). Rabbit polyclonal anti-phospho cofilin antibody was from Cell Signaling Technology (Cat. No. C02-3311S). Mouse monoclonal anti-cofilin antibody was from Santa Cruz Biotechnology (Cat. No. sc-376476). Mouse monoclonal anti-actin antibody was a gift from Dr José Manuel Hernández (CINVESTAV-IPN). Alexa-Fluor 633 secondary antibody was from Invitrogen (Cat. No. A21052). 4′,6-diamidino-2-phenylindole (DAPI) and Phalloidin-Rhodamine reagents were from Thermo Fisher Scientific (Cat. No. D1306 and R415, respectively). Mouse monoclonals anti-α-tubulin and anti-c-MYC antibodies were from Developmental Studies Hybridoma Bank (clone 12G10 and 9E10, respectively). Antibodies were used at a 1:1000 ratio unless otherwise specified. Unless otherwise stated, chemical reagents were from Merck-Sigma-Aldrich.
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