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Epoxy activated sepharose 6b

Manufactured by Merck Group
Sourced in Sao Tome and Principe, United States

Epoxy-activated Sepharose 6B is a chromatography resin composed of agarose beads with epoxy groups covalently attached. It is designed for the immobilization of a wide range of ligands, including proteins, enzymes, and other biomolecules, through the formation of stable ether linkages. The epoxy groups provide a reactive platform for the coupling of ligands, enabling the creation of customized affinity media for various purification and separation applications.

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5 protocols using epoxy activated sepharose 6b

1

Affinity Purification of STAT3 Protein

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ent-Sauchinone was conjugated with cyanogen bromide Epoxy-activated Sepharose 6B (Sigma, St Louis, Missouri, United States). Briefly, ent-Sauchinone (1 mg) was dissolved in 1 ml of coupling buffer (0.1 M NaHCO3 and 0.5 M NaCl, pH 6.0). The Epoxy-activated Sepharose 6B was swelled and washed in 1 mM HCl on a sintered glass filter, then washed with a coupling buffer. Epoxy-activated Sepharose 6B beads were added to the ent-Sauchinone containing coupling buffer and incubated at 4°C for 24 hours. The ent-Sauchinone-conjugated Sepharose 6B was washed with three cycles of alternating pH wash buffers (buffer 1: 0.1 M acetate and 0.5 M NaCl, pH 4.0; buffer 2: 0.1 M TriseHCl and 0.5 M NaCl, pH 8.0). ent-Sauchinone-conjugated beads were then equilibrated with a binding buffer (0.05 M TriseHCl and 0.15 M NaCl, pH 7.5). The control unconjugated Epoxy-activated Sepharose 6B beads were prepared as described above with the absence of ent-Sauchinone. The cell lysate or STAT3 recombinant protein (Abnova, Taipei, Taiwan) were mixed with ent-Sauchinone conjugated Sepharose 6B or Sepharose 6B at 4 C for 24 hours. The beads were then washed three times with TBST. The bound proteins were eluted with SDS loading buffer. The proteins were then resolved by SDS-PAGE followed by immunoblotting with antibodies against STAT3 (1:1000 dilution, Santa Cruz Biotechnology Inc.).
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2

Affinity Purification of iNOS Protein

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BV2 cell lysate was conjugated with epoxy-activated sepharose 6B (Sigma-Aldrich, St. Louis, MO). iNOS (1 mg) was dissolved in 1 mL of coupling buffer (35% DMSO and 0.5 M NaCl, pH 8.3). The epoxy-activated sepharose 6B was swelled and washed in 1 mM HCl through a sintered glass filter, then washed with a coupling buffer. epoxy-activated sepharose 6B beads were added to the MCZ-containing coupling buffer and incubated at 4 °C for 24 h. The iNOS-conjugated sepharose 6B was washed with three cycles of alternating pH wash buffers (buffer 1, 0.1 M acetate and 0.5 M NaCl, pH 4.0; buffer 2, 0.1 M Tris-HCl and 0.5 M NaCl, pH 8.0). iNOS-conjugated beads were then equilibrated with a binding buffer (0.05 M Tris-HCl and 0.15 M NaCl, pH 7.5). The control unconjugated epoxy-activated sepharose 6B beads were prepared as described above in the absence of iNOS. The cell lysate was mixed with iNOS-conjugated sepharose 6B or sepharose 6B at 4 °C for 24 h. The beads were then washed three times with Tris-buffered saline and Tween 20 (TBST). The bound proteins were eluted with SDS loading buffer. The proteins were then resolved by SDS-PAGE followed by immunoblotting with antibodies against iNOS (1:1000, Novus Biologicals, Inc., Littleton).
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3

Lactic Acid Immobilization on Epoxy-Activated Sepharose-6B

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Half gram Epoxy-activated sepharose-6B (GE Healthcare Life Sciences) was swollen in 50 mL distilled water for 1 hour, and 50 ml coupling buffer (0.1 M Na2CO3, pH 13.0 or pH 9.5) was applied for washing beads through a sintered glass filter. Lactic acid (Sigma-Aldrich) (0.5 g in 15 ml coupling buffer) was mixed with Epoxy-activated sepharose-6B, the pH adjusted to either 9.5 or 13.0, and the coupling allowed for 16 h at 37 °C with gentle shaking. The beads were washed to get rid of free ligand with coupling buffer, and remaining active chemical groups blocked by 1 M ethanolamine at pH 8.0. The amounts of cross-linked ligand were much higher in the 6B-LAC-2 (pH 13.0) than the 6B-LAC-1 (pH 9.5) resins (text). The beads were preserved in a solution containing 20% ethanol until use. Before use, ethanol was washed off, and the beads were incubated with cell lysates for 4 h, washed 4 times with HEPES-lysis buffer (50 mM HEPES-KOH, pH7.4, 180 mM NaCl, 1.5 mM MgCl2, 5 mM EDTA, 10% glycerol, 1% NP-40, 100X NaVO3), and re-suspended with HEPES-lysis buffer for Western-Blot and mass spectrometry analyses.
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4

Biochemical Assay Protocol Development

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Folin-Ciocateu’s reagent was purchased from Merck Company (Kenilworth, NJ, USA). 1,1-Diphenyl-2-picryl-hydrazyl (DPPH), ascorbic acid, xylenol orange, and phenolic compounds including apigenin-7-glucoside, catechin, cinnamic acid, caffeic acid, curcumin, chlorogenic acid, epigallocatechin gallate, ferulic acid, gallic acid, gentisic acid, 18-α glycrrytinic acid, hesperidin, quercetin, p-coumaric acid, syringic acid, protocatechuic acid, pyrogallol, and vanillic acid were purchased from Sigma-Aldrich Company (St. Louis, MO, USA). All materials and culture media used for in vitro culture, lysozymes, isopropyl-β-D-thiogalactoside (IPTG), Ni-immobilized metal affinity chromatography matrix, and Epoxy-activated Sepharose 6B were also purchased from Sigma-Aldrich Company.
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5

Affinity Purification of GST-Tagged Proteins

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Epoxy activated sepharose 6B and glutathione (GSH) were purchased from sigma chemical co. (St. louis, MO, USA). IPG strips, IPG buffer, DTT, CHAPS and urea were obtained from Amersham biosciences, NJ, USA. Rabbit polyclonal anti-GST antibody, Goat anti- rabbit IgG ALP conjugate secondary antibody, BCIP-NBT substrate for alkaline phosphatase and protein molecular weight marker were obtained from Bangalore Genei, India. All other chemicals were of analytical grade and were obtained from local firms.
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