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4 6 diamidino 2 phenylindole or dapi

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4',6-Diamidino-2-Phenylindole, or DAPI, is a fluorescent stain that binds strongly to the A-T rich regions in the minor groove of DNA. It is commonly used in fluorescence microscopy to visualize and identify cell nuclei.

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2 protocols using 4 6 diamidino 2 phenylindole or dapi

1

Immunofluorescence Microscopy of Histone and Tryptase

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Cells were seeded on glass coverslips treated with 0.001% poly-l-lysine (Sigma Aldrich, USA) and left unstimulated or stimulated with HK-Mtb (MOI 10) or 25 nM PMA for different times. After incubation at 37°C and 5% CO2, cells were fixed with 4% paraformaldehyde and permeabilized with 0.2% Triton X-100 (Sigma Aldrich, USA) during 10 min and blocked with universal blocking reagent (BioGenex, USA). Cells were incubated with either anti-histone H3 (Lifespan Biosciences, USA) or anti-tryptase (Abcam, USA) and revealed with secondary antibody labeled with R-phycoerythrin (histone) (Invitrogen, USA) or Alexa Fluor 488 (tryptase) (Invitrogen USA). DNA was stained with 10 µg/ml 4′,6-Diamidino-2-Phenylindole or DAPI (Invitrogen, USA). Samples were mounted with Vectashield and images were obtained in an Axiovert 200 M confocal microscope (Carl Zeiss, Germany) with 63× oil immersion oil objective. Images were collected and processed with Zeiss LSM Image Pascal version 4.0.
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2

Immunohistochemical Evaluation of ROCK and αSMA in ED

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Immunohistochemistry staining against ROCK subtypes 1 and 2 and α smooth muscle actin (αSMA) was performed on corpus cavernosum of an ED patient. Samples were fixed in 10% neutral-buffered formalin and embedded in paraffin. Paraffin sections were dewaxed in xylene and rehydrated with a graded ethanol series. Slides were washed in Tris-buffered saline (TBS). For epitope retrieval, slides were exposed in citrate buffer (pH 6) and heated to about 90°C for 60 minutes. After washing in TBS, the slides were blocked for 60 minutes using BSA 1%, NGS 3%, Triton X-100 0.3% in PBS (Sigma-Aldrich, St. Louis, MO, USA), followed by incubation overnight on 4°C in a humidified chamber with 1/200 Rb ROCK1 (Abcam, Cambridge, UK), 1/200 Rb anti-ROCK2 (Abcam, Cambridge, UK), 1/200 Ms anti-smooth muscle actin (Dako, Copenhagen, Denmark). Then, slides were rinsed in PBS, incubated for one hour on room temperature with secondary antibodies 1/500 Alexa Fluor 594 donkey anti-mouse, 1/500 Alexa Fluor 488 donkey anti-rabbit (Invitrogen, Carlsbad, CA, USA) as secondary antibodies. Control staining in the absence of primary antibodies was used to evaluate nonspecific staining by secondary antibodies. Nuclear staining was performed using 4',6-diamidino-2-phenylindole or DAPI (Invitrogen, Carlsbad, CA, USA). Slides were evaluated and photographed using a Olympus microscope (Olympus, Tokyo, Japan).
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