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Trizol solution

Manufactured by Zymo Research
Sourced in United States

TRIzol solution is a monophasic solution of phenol, guanidine isothiocyanate, and other components designed for the isolation of total RNA from cells and tissues. It is a widely used reagent for the isolation of high-quality RNA from a variety of biological samples.

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3 protocols using trizol solution

1

Extracting EV-Derived RNA from NanoVilli Chips

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To extract RNA from tumor-derived EVs captured on NanoVilli Chips, we performed on-chip lysis of EVs by introducing 600 μL of TRIzol solution (Zymo Research, USA) and 600 μL of anhydrous ethanol (Sigma-Aldrich) sequentially through the NanoVilli Chip. The effluent solution was collected in a 2.0 mL RNase-free Eppendorf tube at the same time. Then, RNA was purified using a Direct-zolRNA MicroPrep Kit (Zymo Research). The enzyme DNase I was used to digest DNA for 15 min to make sure that cfDNA was not analyzed in the measurements. The RNA was dissolved in DNase/ RNase-free water and then measured with a Qubit 3.0 Fluorometer (Thermo Fisher Scientific) in combination with the Qubit RNA HS Assay (Thermo Fisher Scientific) using the manufacturer’s protocol.
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2

Molecular Assay for Gene Expression Analysis

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Diclofenac sodium, ibuprofen, paracetamol, isopropyl alcohol, PEG400, and 75% alcohol were obtained from Sigma-Aldrich (St. Louis, MO, USA). Diclofenac sodium salt was solubilized in PEG400. TRIzol solution and a cDNA synthesis kit were purchased from ZYMO RESEARCH (Irvine, CA, USA). TB Green® Fast qPCR Mix was purchased from Takara Bio (Kusatsu, Japan). The oligonucleotides, for PCR reaction, were bought from Integrated DNA technologies (Coralville, IA, USA).
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3

Isolation and Analysis of Circulating Trophoblasts

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NanoVelcro Chips were used for isolating the single and clustered cTBs from pregnant women. To extract RNA from the single and clustered cTBs captured on NanoVelcro Chips, we performed on-chip lysis of cells by introducing 600 µL of TRIzol solution (Zymo Research, USA) and 600 µL of anhydrous ethanol (Sigma-Aldrich) sequentially through the NanoVelcro Chips. The effluent solution was collected in a 2.0 mL RNase-free Eppendorf tube at the same time. Then, RNA was purified using a Direct-zol™RNA MicroPrep Kit (Zymo Research). cDNA was synthesized using a Thermo Scientific Maxima H Minus Reverse Transcriptase Kit according to the manufacturer’s instructions. cDNA was then tested for the trophoblast-specific gene using duplex ddPCR in each tube with two fluorescence filters (i.e., FAM and VIC). RT-ddPCR experiments were performed using the same protocol as that used for the placenta tissues.
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