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6 protocols using h1819

1

Cancer Cell Culturing and Xenograft Processing

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MCF7, MDA-MB-453, A-431, H1781, H1819, Calu-3, BT-474, SKBR3, and NCI-N87 cell lines were purchased from the ATCC. MCF7, MDA-MB-453, and A-431 were cultured in DMEM; H1781, H1819, Calu-3, and NCI-N87 in RPMI-1640; BT-474 in ATCC HybriCare Medium with 1.5 g/L sodium bicarbonate; SKBR3 in the ATCC-formulated McCoy’s 5a Medium Modified. To make the complete medium, all media were supplemented with 10% FBS and 1% streptomycin/penicillin. All cells used in this study were periodically tested negative for Mycoplasma using the Mycoplasma Plus PCR Primer Kit (Agilent). All patient-derived cancer cells or tumor spheroids in this study were collected and studied according to the Declaration of Helsinki and DFCI IRBs. DFCI 429 was established from a pleural effusion sample. Next-Generation Sequencing confirmed de novo HER2 amplification. DFCI315 and DFCI359 were characterized to harbor HER2 exon20 V777_G778insGSP and HER2 exon19 755_757LREdelinsRP, respectively (23 (link)). Xenograft tumors were processed for short-term ex vivo as previously described (23 (link)). The spheroids in a range of 40 to 70 μmol/L were resuspended in type I collagen (Corning) and loaded into the DAX-1 3-D cell culture chip (AIM Biotech). After solidification, the media were applied to the outer channels with indicated drugs.
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2

Profiling of NSCLC Cell Lines and Tissues

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Established human NSCLC cell lines (A549, H1299, H1975, H441, HCC827, H820, H1819, and H1648) and HEK293T were purchased from ATCC. Patient‐derived cell lines (HKULC4, PDCL#24, and FA10) were established from resected primary lung cancers or malignant pleural effusion. Cells were cultured in RPMI1640 (Invitrogen, Carlsbad, CA) with 10% FBS. All procured cell lines used in this study were authenticated using the AmpFlSTR Identifiler PCR Amplification Kit for short tandem repeat profiling according to the manufacturer's instruction (Thermo Fisher Scientific, Waltham, MA). Primary lung cancer and corresponding normal lung tissues were obtained from surgical specimens of ethnic Chinese collected in Queen Mary Hospital, Hong Kong. Tissue collection protocols were approved by the HKU/HA HKW Institutional Review Board, the assigned study number is UW10‐168. Tissues were sampled after written informed consents were obtained from patients. Tumor diagnosis and staging were assessed by a qualified pathologist (MPW).
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Immortalized Airway Epithelial Cell Lines

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An immortalized human airway epithelial cell line (16HBE14o, Simian virus 40 (SV40)-transformed human bronchial epithelial cells) described by Cozens AL et al. (1994) [9] (link) was kindly provided by Grunert DC (California Pacific Medical Center Research institute). A sub-clone of 16HBE14o cells, described as NHBE-T in this study, was used in the present study. Human lung cancer cell lines (A549, H358, H2087, H1819, H441, and H1299) and a human embryonic kidney cell line (HEK293T) were purchased from the American Type Culture Collection (ATCC, Manassas, VA). The human lung cancer cell lines, Lu135 and Lu139 were purchased from Riken Cell Bank (Tsukuba, Japan). PC9 and HARA were purchased from Immunobiological Laboratories Co. (Gunma, Japan). TKB5, TKB6, TKB7, TKB8, TKB8, TKB14, and TKB20 were established and gifted by Dr. H Kamma via Dr. T Yazawa (Kyorin University School of Medicine, Tokyo, Japan) [10] (link). The Ethics Committee of Yokohama City University approved the experimental protocol using these cell lines.
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4

Lung and Squamous Cancer Cell Lines

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Three human squamous carcinoma cell lines (H226, H520 and HCC15), four human lung adenocarcinoma cell lines (H1819, H1435, H1395 and A549), one large-cell carcinoma cell lines (H460), one carcinoid cell line (H727) and two immortalized epithelial cell line (16HBE and BEAS-2B) were purchased from the American Type Culture Collection. One SCC line HCC2450 was a generous gift from Dr. John D. Minna. All cancer cell lines were maintained in RPMI-1640 or DMEM (Life Technologies, Grand Island, NY) with 10% fetal bovine serum (FBS). 16HBE and BEAS-2B were maintained in Dulbecco’s modified eagle medium (DMEM) with 10% FBS. All cells were cultured in 1 mM penicillin/streptomycin.
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5

Lung Cancer Cell Line Cultivation

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Lung cancer cell lines (A549, H2009, H1819, Calu3, H23, H1993, H226, H460, and H1299) and the normal bronchial epithelial cell line (BEAS2B) were obtained from the American Type Culture Collection, as previously described [7 (link)]. The cell lines were cultured in Dulbecco’s modified Eagle’s medium (DMEM) (Thermo Fisher Scientific, Waltham, MA, USA) or RPMI-1640 medium (Thermo Fisher Scientific), supplemented with 1% penicillin–streptomycin and 10% fetal bovine serum.
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6

Immortalized Human Airway Epithelial Cells

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An immortalized human airway epithelial cell line (16HBE14o, Simian virus 40 (SV40)-transformed human bronchial epithelial cells) described by Cozens AL et al. (1994) [14] (link) was kindly provided by Grunert DC (California Pacific Medical Center Research Institute). A sub-clone of 16HBE14o cells, described as NHBE-T in this study, was used. Immortalized airway epithelial cell lines (HPL1D and HPL1A, SV40-transformed human small airway epithelial cells) were established by Masuda A et al. (1997) [15] (link). Human lung cancer cell lines (A549, H322M, H358, H522, H820, H2087, H23, EKVX, H226, H827, H1819, H441, H4006, HOP62, H1299, and H460) and a human embryonic kidney cell line (HEK293T) were purchased from the American Type Culture Collection (ATCC, Manassas, VA). The human lung cancer cell line LC2AD, Lu130, Lu135, Lu139, and Lu140, was purchased from the Riken Cell Bank (Tsukuba, Japan). The human lung cancer cell lines, PC9 and HARA, were from Immuno-Biological Laboratories Co. (Gunma, Japan). The human lung cancer cell lines, TKB1, TKB2, TKB4, TKB5, TKB6, TKB7, TKB8, TKB9, TKB12, TKB14, TKB15, TBK17, and TKB20, were obtained from Dr. Hiroshi Kamma via Dr. Takuya Yazawa (Kyorin University School of Medicine) [16] (link). Primary small airway epithelial cells (SAEC) and normal human bronchial epithelial cells (NHBE) were purchased from SANKO Kagaku (Tokyo, Japan).
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