The largest database of trusted experimental protocols

4 protocols using ab59257

1

ChIP Assay Using Magna ChIP Kit

Check if the same lab product or an alternative is used in the 5 most similar protocols
ChIP assay was performed using Magna ChIP Chromatin Immunoprecipitation Kit according to the manual (Millipore, Billerica, MA, USA). Cross-linked cells were sonicated to fragments (200–1,000 bp). Specific antibodies for SP1 (ab59257, Abcam) or FLAG were administered to precipitate DNA-protein complexes. The precipitated RNAs with proteins were quantified and detected by real-time qRT-PCR with SYBR-Green incorporation (Applied Biosystems, Foster City, CA, USA). Immunoglobulin G (IgG) acted as the negative control. The primer sequences for the promoter are presented in Table S1.
+ Open protocol
+ Expand
2

Immunofluorescence Staining of ACE2, SP1, and HNF4α

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were fixed with 4% paraformaldehyde (PFA) for 10 min at room temperature. Paraformaldehyde-fixed, paraffin-embedded tissue samples was cut into 4 μm slices and adhered to frosted glass slides. After washing with PBS and treating with PBS containing 0.1% Triton X-100 for 15 min, the sections and cells were permeabilized and blocked with 0.1% Tween-20 in PBS (PBST) containing 5% FBS for 90 min at room temperature. The cells were immunostained with anti-ACE2 (ab15348, 1:500, Abcam), anti-SP1 (T453) (ab59257, 1:500, Abcam), or anti-HNF4α antibodies (3113, 1:1 000, Cell Signaling Technology) overnight at 4 °C. The tissue sections were immunostained with anti-ACE2 (GB11267, 1:200, Servicebio, Wuhan, China) or anti-SARS-CoV-2-N antibodies (40143-MM05, 1:500, SinoBiological, Beijing, China) overnight at 4 °C. After washing three times with 0.1% Tween-20 in PBS (PBST), the cells were incubated with Alexa Fluor 594 anti-rabbit IgG (H+L) (A-21207, 1:200, ThermoFisher Scientific), Cy3 conjugated goat anti-mouse IgG (H+L) (GB21301, 1:300, Servicebio), or Alexa Fluor 488-conjugated goat anti-rabbit IgG (H+L) (GB25303, 1:500, Servicebio) at room temperature for 1 hr. After staining with primary antibodies, nuclei were counterstained with 4’,6-diamidino-2-phenylindole (DAPI). Images were acquired using a Zeiss Axioskop 2 plus fluorescence microscope (Carl Zeiss, Jena, Germany).
+ Open protocol
+ Expand
3

Epigenetic Regulation in Zebrafish

Check if the same lab product or an alternative is used in the 5 most similar protocols
Sodium butyrate (NaBu), trichostatin A (TSA), cambinol (Cmb), and 5-aza-2′-deoxycytidine (AZA) were purchased from Sigma-Aldrich (#303410, #T8552, #C0494, and #A3656) and dissolved in phosphate-buffered saline (PBS) to final concentrations of 2 mM, 0.1 μM, 0.2 μM, and 15 mM in the fishes’ water, respectively. PBS alone was used as vehicle control. The pharmacological treatment lasted for 24 h from 7 to 8dpf. Acetyl-histone 4 and acetyl-lysine antibodies were obtained from Millipore (#06-866 and #05-515), anti-HDAC1 and anti-YY1 from ActiveMotif (#39531 and #61780), anti-Sp1 and anti-H4 from Abcam (ab59257 and ab16483), and McrBC enzyme from New England Biolabs (M0272).
+ Open protocol
+ Expand
4

Cell Culture and Signaling Pathway Modulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell culture and chemicals. HO-8910, HO-8910pm (a highly metastatic human ovarian cancer) and SKOv3 cell lines were cultured in RPMI-1640 (HyClone, Logan City, UT, USA) medium supplemented with 10% of fetal bovine serum (FBS; gibco, grand Island, NY, USA) and maintained in a humidified incubator at 37˚C and 5% CO 2 . The following antibodies were purchased for western blotting and immunohistochemical staining: anti-AKT (ab32505; Abcam, Cambridge, UK), p70S6K (9202; Cell Signaling Technology, Inc., Danvers, MA, USA), anti-ERK1/2 (AM2189b; Abgent, San Diego, CA, USA), anti-Sp1 (sc14027; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), anti-phospho-AKT (ab81283; Abcam), anti-phsopho-p70S6K (9234; Cell Signaling Technology), anti-phospho-ERK1/2 (ab32538), anti-phospho-Sp1 (T453) and (ab59257) (both from Abcam), anti-phospho-Sp1 (T739) (SAB4504535; Sigma, St. Louis, CA, USA), anti-CD147 (24) , and anti-β-actin (AB10024; Sangon Biotech, Shanghai, China). LY294002 (L9908; Sigma), rapamycin (R706203; Sangon Biotech) and PD98059 (P215; Sigma) were diluted in dimethyl sulfoxide (DMSO).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!