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8 protocols using rpmi 1640

1

Colorectal Cancer Cell Line-Based Viability Assay

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Human colorectal cancer cell lines SW620, LoVo, Hct116, Hct8, SW480, HT29 and murine colorectal cancer CT26 were obtained from the American Type Culture Collection. Cells were maintained in a 5% CO2 humidified atmosphere at 37 °C and cultured in DMEM or RPMI-1640 supplemented with 10% FBS (Dutscher). Cells were routinely tested for mycoplasma contamination using the Mycoalert Mycoplasma Detection Kit (Lonza).
Treatments were carried out for 6, 16, 24, 48 or 72 h with 10 µM of 5-fluorouracil (Sigma Aldrich), oxaliplatin (Accord Healthcare Limited), triacsin C (Cayman Chemical) LPCAT2 inhibitor: TSI-01 (Cayman Chemical), DGAT2 inhibitor: PF-06424439 (Sigma Aldrich), or oleic acid (Sigma Aldrich). Cell viability was determined using the annexin V-FITC and 7-aminoactinomycin D (7AAD) staining from BD Biosciences according to the manufacturer’s instructions. The inhibitory concentrations 50% (IC50) were assessed by crystal violet staining after 48 h of treatment. IC50 values were calculated by a four-parameter non-linear regression with SigmaPlot version 6 software (Systat software, Inc.).
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2

Treating Murine Breast Cancer Cells

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Mouse breast cancer cells 4T1 (TN) and EMT-6, all syngeneic from Balb/C mice, were obtained from the American Type Culture Collection (ATCC) and were tested regularly for mycoplasma contamination using a Universal Mycoplasma detection kit (ATCC). These cells were maintained in DMEM medium (Dominique Dutscher, Bernolsheim, France) supplemented with 10% fetal bovine serum (FBS, Dominique Dutscher) at 37 °C in a humid atmosphere with 5% CO2. MSC2, a murine immortalized MDSC cell line obtained from Balb/C Gr-1+ splenocytes, was obtained from V. Bronte (Istituto Oncologico, Padova, Italy). They were cultured in RPMI 1640 (Dominique Dutscher) supplemented with 10% FBS and 1% penicillin, streptomycin and amphotericin B (PSA) antibiotic mix (PAN Biotech GmbH, Aidenbach, Germany) at 37 °C under 5% CO2.
For ex vivo experiments, MDSCs and/or anti-CD3/anti-CD28 Dynabeads (Gibco, Thermo Fischer Scientific, Waltham, MA, USA)-activated T lymphocytes were treated or not (Ctrl) for 24, 48 h or 5 days with 100, 250 or 500 nM of doxorubicin +/− 10 or 100 µM of GTN (Merck, Lyon, France) +/− 10 mM of NAC. MSC-2 cells were also treated with 1 mM of Nitrosocysteine (Cys-NO) for 15 min.
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3

Cell Line Treatments and Assays

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Human cervical carcinoma cell line (HeLa), human osteosarcoma epithelial cell line (U20S) and mouse embryonic immortalized (SV40) fibroblasts (MEF) cIAP1−/−/cIAP2−/− (J Silke, Melbourne, Australia), were grown in Dulbecco’s modified Eagle‘s medium (Dominique Dutscher, Brumath, France) or RPMI 1640 (Roswell Park Memorial Institute, Dominique Dutscher) containing 10% fetal bovine serum (Dominique Dutscher) at 37 °C in a 5% CO2 atmosphere and 95% humidity. Cells were treated with 10 or 20 μM etoposide (Sigma-Aldrich, Lyon, France) for 6 h, 100 μg/ml cycloheximide (Sigma-Aldrich), 10–35 μM PYR-41 (Calbiochem, Merck Millipore, Saint-Quentin en Yvelines, France) for 24 h, 0.1–100 μM AMI-I (Enzo Life Sciences, Villeurbanne, France) for 24 h, or 1 μM GDC-0152 (Selleckmed, Euromedex, Souffelweyersheim, France). MG132 (Sigma-Aldrich,) was used at 1 μM or 5 μM overnight.
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4

Quantifying CD27+ Extracellular Vesicles

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MPs were first stained with an anti-CD27- BV510 antibody (BD Biosciences) at 4°C for 30 minutes and then washed by centrifugation for 1 hour at 100,000 x g and 4°C, to eliminate the antibodies that had not bound to MPs. MPs were resuspended in filter-sterilized medium (passage through a filter with 0.1 μm pores) and the CD27+ MPs present in the MP preparation were counted.
PBMCs were isolated by Ficoll density gradient centrifugation. We cultured 2 x 104 PBMCs for 18 hours with quantified CD27-expressing MPs. We added various amounts of the bulk MP preparation to the culture medium (filter-sterilized, passage through a filter with 0.1 µm pores) such that we obtained ratios of PBMCs to CD27-expressing MPs of 1:1, 1:10 and 1:20 (PBMC: CD27-expressing MPs).
The culture medium consisted of RPMI 1640 supplemented with 5% FBS (Dutscher, Bernolsheim, France), 2 mM L-glutamine, 100 µg/ml penicillin/streptomycin, MEM non-essential amino acids solution (1X), and 1 mM sodium pyruvate (all from Life Technologies, Carlsbad, CA).
Following coculture, the PBMCs were harvested for flow cytometry to assess their co-expression of CD27 from MPs (BV510-labeled). PBMCs were stained with anti-CD4-APC-H7 and anti-CD3-PE (BD Biosciences) antibodies. After staining (4°C, 30 minutes), the cells were washed twice with PBS.
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5

Culture and Maintenance of Cancer Cell Lines

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MDA-MB-231 (human mammary adenocarcinoma), A549 (human lung adenocarcinoma), SK-HEP-1 (human hepatocellular carcinoma), DU145 (human prostate adenocarcinoma) and the two human colon adenocarcinomas HCT116 and SW480 cell lines were cultured with high-glucose Dulbecco's modified Eagle's medium provided by Dutscher (Dutscher, Brumath, France) supplemented with 10% fetal bovine serum (Dutscher). PANC-1 (human pancreatic carcinoma) cell line was cultured in RPMI 1640 (Roswell Park Memorial Institute medium) provided by Dutscher and supplemented with 10% fetal bovine serum. All these cell lines were grown in an incubator at 37 °C and 5% CO2.
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6

Immortalized MDSC Cell Line Characterization

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MSC-2 cell line is CD11b+/Gr-1+ immortalized MDSC obtained from CT-26 tumor-bearing BALB/c mice21 (link).
EL4 thymoma cells and MSC-2 cells were cultured at 37 °C under 5% CO2 in RPMI 1640 with 10% (v/v) heat inactivated fetal bovine serum penicillin, streptomycin, amphotericin B antibiotic cocktail, all from Dutscher (Dutscher, Brumath, France). Cell lines were authenticated by examination of morphology and growth characteristics and confirmed to be mycoplasma free. MSC-2 cells were treated with FAs (20–60 µM) bound to FA free-bovine serum albumin (ratio 4:1) (BSA, Sigma-Aldrich) 3 h prior to 5-FU treatment at 1 µM or lipopolysaccharide (LPS) (O55:B5, Sigma-Aldrich) at 100 ng/ml.
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7

Murine Cancer Models: Subcutaneous Implantation

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CT26 American Type Culture Collection (ATCC) murine colon cancer cells (USA) were cultured in RPMI 1640 (Dutscher, France) + 10% fetal calf serum (Dutscher, France) (37 °C, 5% carbon dioxide and 95% humidity). B16-F10 murine melanoma cancer cells (USA) were cultured in DMEM (Dutscher, France) + L-Glutamine + red phenol + glucose (4.5 g/l) + 10% fetal calf serum (Dutscher, France) (37 °C, 5% carbon dioxide and 95% humidity).
The day before mice were injected with cancer cells. These cells were contacted with trypsin and diluted to ½. The unit injection included 5 × 105 CT26 cells in 100 μl of NaCl, or 1 × 106 B16-F10 cells 100 μl of NaCl, in performed subcutaneously on the right flank of immunocompetent BALB/c female and C57BL female mice and 8-week immunosuppressed athymic BALB/c nude mice (Charles River Laboratories, Saint-Germain-des-Monts, France). During the entire duration of the experiment, mice were housed in our approved animal facility (Centre Georges-François Leclerc, Dijon, FRANCE). The mice were sacrificed by cervical dislocation after Isoflurane 2.5% anesthesia as soon as a limit point was reached (Tumoral Volume (TV) ≥1500 mm3, pain, significant necrosis).
Before experimentation, the small animal ethics committee and the Ministry of Higher Education and Research validated the project.
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8

Isolation of NK Cells from Healthy Donors

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Total blood was obtained from healthy donors using cytapheresis kits (French Blood Institute of Bourgogne Franche-Comté). All donors whose cells were tested were informed and signed an agreement explaining that the remaining blood of their donation would be used for research projects. The 'healthy status' of each was carefully checked before each donation by clinicians (clinical examination and interview, biological analysis). Peripheral blood mononuclear cells (PBMC) were isolated by density gradient centrifugation (Ficoll-Paque TM Premium, Dutscher, Brumath, France). PBMC were washed repeatedly, counted and suspended in RPMI 1640 (Dutscher) supplemented with 10% heat-inactivated fetal calf serum (iFCS, Dutscher) and 1% penicillin streptomycin (PS, Dutscher). NK cells were specifically sorted using the Easysep Human Enrichment NK cells kit (Stemcell Technologies, Grenoble, France). Seventeen donors were tested during the study (all were men, mean age 48 ± 8 years).
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