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26 protocols using m o m blocking reagent

1

Immunofluorescence Imaging of Mouse Skeletal Muscle

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GC muscles were harvested from C57BL/6J mice, embedded in the Tissue-Teck O.C.T compound (#4583, Sakura), and rapidly frozen in isopentane fully cooled by liquid nitrogen. GC muscle cryosections (5 μm-thick slices) were blocked in PBS containing 0.3% Triton X-100 and M.O.M blocking reagent (Vector Laboratories, USA) for 1 h at room temperature. Slices were then incubated overnight at 4 °C with primary antibodies, such as the anti-laminin antibody (1:500), and anti-skeletal fast (1:500) or slow myosin (1:1,000) antibodies in the blocking solution with M.O.M. protein concentrate (Vector Laboratories) as previously described81 (link). Section slices were incubated with secondary antibodies, such as Alexa Fluor 488 anti-mouse IgG antibody (1:2,000) and TRITC-conjugated anti-rabbit IgG antibody (1:40) in PBS containing 0.3% Triton-X-100 for 1 h at room temperature. Image acquisition was performed with an inverted fluorescence microscope, BZ-X710 (Keyence, USA). The fiber cross-sectional area was measured for approximately 200 adjacent muscle fibers in each section for each mouse using ImageJ software (NIH, Bethesda, USA) as described elsewhere82 (link).
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2

Immunofluorescent Labeling of Mouse Brain Sections

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For immunofluorescence staining of brain sections, mouse brains were perfusion-fixed with 4% paraformaldehyde, cryoprotected in 30% sucrose solution, frozen in optimal cutting temperature compound (Tissue-Tek), and cut into 10-μm-thick sections. The frozen tissue sections were washed with phosphate-buffered saline (PBS; pH 7.4) and permeabilized in 5% bovine serum albumin/0.5% Triton X-100 in PBS for 30 min. After blocking endogenous biotin with an endogenous avidin-biotin blocking kit (Nichirei) and M.O.M. blocking reagent (Vector Laboratories) according to the manufacturer’s protocol, the sections were incubated overnight with anti-calbindin-D-28K antibody (1:2000; Sigma). Primary antibody binding was detected with M.O.M. biotinylated anti-mouse immunoglobulin G reagent (Vector Laboratories), subsequently stained with streptavidin-conjugated Cy3 (Vector Laboratories). For nuclear staining, Hoechst 33258 (Wako) was used. Fluorescence was visualized using a confocal laser scanning microscope (FluoView FV10i, Olympus).
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3

Immunofluorescence Staining of TA Muscle

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TA muscle cryosections were fixed using 4% PFA/PBS for 2 min and permeabilized (0.1% Triton X-100, 0.1 M Glycine, PBS) for 5 min. Cryosections were washed with PBS and blocked in 5% goat serum, 2% BSA in PBS for 2 h, supplemented by M.O.M. blocking reagent (1:40, Vector Laboratories) when mouse primary antibodies were used. Primary antibodies (listed in Supplementary Table 2) were incubated overnight at 4 °C. Alexa Fluor-conjugated secondary antibodies (Life Technologies) were incubated for 1 h. Sections were washed with PBS and stained with DAPI for 10 min, rinsed with PBS, and mounted with PermaFluor mounting medium (Fisher).
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4

Cryosectioning and Immunohistochemistry for Retinal Analysis

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For cryosection analyses, heads or enucleated eyes were fixed in 4% (w/v) PFA in PBS for up to 2 h on ice. The tissues were equilibrated overnight at 4°C in 30% (w/v) sucrose in PBS and embedded in OCT compound (Sakura Finetek). Flat-mount dissections were done as described above for lineage tracing. Immunohistochemistry was performed on cryosections (10 µm) or flat-mount retina as previously described (Cantrup et al., 2012 (link); Ma et al., 2007 (link)). An additional blocking step involving M.O.M Blocking Reagent (Vector Labs) was used in all experiments involving monoclonal primary antibodies. The following primary antibodies and dilutions were used: BrdUAlexa555 (1:20, BD Pharmingen, #560210); Brn3 (1:50, SCBT, #sc6026); Casp3 (1:500, Abcam, #ab13847); NEFH, (1:1000, Covance, #SMI31R); PH3 (1:100, Millipore, #06-570); pS6S235/236 (1:200, Cell Signaling Technology, #4857); pS6S240/244 (1:200, Cell Signaling Technology, #5364). All immunohistochemistry antibodies have been independently verified in our previous studies (Hagglund et al., 2017 (link); Jones et al., 2015 (link)).
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5

Puromycin Incorporation Visualization

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Mice were injected intraperitoneally with 200 μl of 2.5 mM puromycin (Fisher Scientific) and euthanized after 1 hour. Ventral prostates were formalin-fixed, paraffin-embedded. Conventional immunofluorescence against puromycin (Millipore) was performed as described in Supplementary Materials with antigen retrieval at 95°C for 30 min and additional incubation with M.O.M. Blocking Reagent (Vector) for 1 hour at room temperature.
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6

Immunostaining of DLK1 and CD31 in Paraffin Sections

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Five-micron-thick paraffin sections were prepared. Sections were deparaffinized with xylene and rehydrated with graded ethanol washes. Sections were then cooked in Tris-based antigen-unmasking solution to retrieve the epitopes. Following antigen retrieval, sections were covered with TrueBlack (Biotium, 23007) for 1 min and washed twice with PBS for 10 min. Blocking was done at room temperature for 1 h in 3% donkey serum and M.O.M. blocking reagent (Vector labs). Slides were incubated with primary antibodies raised against DLK1 (1:200; Abcam, ab119930) and CD31 (1:200; Abcam, ab28364) for 48 h at 4 °C. Slides were washed three times with PBS and incubated with corresponding secondary antibodies (anti-mouse Alexa Fluor 546, A10036; anti-rabbit Alexa Fluor 488, SA5-10038; 1:200) for 2 h followed by three washes in PBS. Sections were mounted using VECTASHIELD mounting medium containing DAPI (Vectashield plus Antifade DAPI, Vector lab, H-2000). Images were acquired using a Leica Thunder microscope. The exposure settings and laser gain were kept constant for each condition, and analysis was performed using NIH ImageJ software.
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7

Histological Analysis of Collagen Chip Samples

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Samples were fixed with 4% formaldehyde solution then rinsed with PBS. They were then perfused with 15% native PAGE acrylamide gel to preserve the internal structure. The PDMS was then cut to expose the collagen of the chip. The sample was processed, embedded in paraffin, and sectioned following standard histology techniques. Paraffin was removed from the slices and treated with an antigen unmasking solution (Vector Laboratories, CA). M.O.M. blocking reagent (Vector Laboratories, CA) was applied to the samples for 1 hour at room temperature. Then the primary antibody PRSS2 (1 : 100, cat. Sab1400226; Sigma) or E-cadherin (1 : 100, cat. ab76055; Abcam) was added to the samples and incubated at room temperature for 1 hour. Biotinylated secondary antibody (1 : 200) was added and incubated for 20 minutes at room temperature. Finally, biotinylated Avidin-Alexa Fluor 488 (cat. S11223, Invitrogen, CA) and DAPI (cat. H-1500, Vector Labs, CA) were added to the samples and incubated at room temperature for 20 minutes.
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8

Immunohistochemical Analysis of Protein Targets

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For immunohistochemistry, animals were deeply anaesthetised using 2,2,2-tribromoethanol (Avertin, 200 mg/kg, i.p., FUJIFILM, Wako Pure Chemical, Japan) and perfused with 4% PFA. The brains were postfixed with 4% PFA overnight, then maintained in 20% sucrose in PBS at 4°C, embedded in Tissue-Tek O.C.T. compound (Sakura Finetek Japan, Japan) and sectioned on a freezing cryostat (CM3000, Leica Microsystems, Germany) at 40 μm thickness. Floating brain slices were incubated with blocking buffer (M.O.M. Blocking Reagent, Vector Laboratories, USA) for 1 h at room temperature, and then incubated with the indicated primary antibodies overnight at 4°C. Labelled cells were visualised with the appropriate fluorescent secondary antibodies. The brain slices were imaged with a fluorescence microscope (BZ-9000, Keyence, Japan) or confocal laser-scanning microscope (LSM880-ELYRA PS.1, Zeiss, Germany). The primary antibodies used were anti-TH (AB152, Millipore) and anti-PERK (sc-377400, Santacruz).
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9

Immunostaining of DLK1 and CD31 in Paraffin Sections

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Five-micron-thick paraffin sections were prepared. Sections were deparaffinized with xylene and rehydrated with graded ethanol washes. Sections were then cooked in Tris-based antigen-unmasking solution to retrieve the epitopes. Following antigen retrieval, sections were covered with TrueBlack (Biotium, 23007) for 1 min and washed twice with PBS for 10 min. Blocking was done at room temperature for 1 h in 3% donkey serum and M.O.M. blocking reagent (Vector labs). Slides were incubated with primary antibodies raised against DLK1 (1:200; Abcam, ab119930) and CD31 (1:200; Abcam, ab28364) for 48 h at 4 °C. Slides were washed three times with PBS and incubated with corresponding secondary antibodies (anti-mouse Alexa Fluor 546, A10036; anti-rabbit Alexa Fluor 488, SA5-10038; 1:200) for 2 h followed by three washes in PBS. Sections were mounted using VECTASHIELD mounting medium containing DAPI (Vectashield plus Antifade DAPI, Vector lab, H-2000). Images were acquired using a Leica Thunder microscope. The exposure settings and laser gain were kept constant for each condition, and analysis was performed using NIH ImageJ software.
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10

Immunostaining of Neuronal Markers

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Sections were rehydrated in PBS and then permeabilized/blocked in 0.3% Triton X-100, 1% BSA, 10% donkey serum (Jackson ImmunoResearch), and MOM blocking reagent (Vector Laboratories) for 1 h at room temperature. Slides were then incubated in primary antibodies [anti-synapsin-1 (5297S, Cell Signaling), anti-β-tubulin III (T8578, Sigma-Aldrich), anti-S100 (RB044A0, Thermo Scientific Lab Vision), anti-myelin basic protein (AB9348, EMD Millipore)] in 0.3% Triton X-100, 1% BSA overnight at 4°C. The following day, sections were washed in PBS and stained with fluorescently conjugated α-bungarotoxin and/or appropriate secondary antibodies (Biotium) in 0.3% Triton X-100 for 1 h at room temperature. After final PBS washes, slides were coverslipped with DAPI mounting medium (Southern Biotech) and imaged on a confocal microscope (Leica SP5).
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