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5 protocols using alexa fluor 488 conjugated goat anti rabbit

1

Modulation of ER Stress Pathways

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The ER stress activators thapsigargin (TG) and tunicamycin (TM) were purchased from Sigma-Aldrich; Merck KGaA and Beijing Solarbio Science & Technology Co., Ltd., respectively. The ER stress inhibitors 4-phenylbutyric acid (PBA) and sodium tauroursodeoxycholate (TUDCA) were purchased from Sigma-Aldrich; Merck KGaA. TM, TG, PBA and TUDCA were dissolved in dimethyl sulfoxide (DMSO; Leagene). Anti-glucose-regulated protein 78 kDa (GRP78; ab12223), anti-activating transcription factor (ATF)6 (ab11909), anti-phosphorylated eukaryotic initiation factor 2α (p-IRE1α; ab48187), anti-E-Cadherin (ab40772), anti-fibronectin (ab2413) and anti-α-SMA (ab32575) primary antibodies were purchased from Abcam. Horseradish peroxidase-conjugated anti-p-eIF2α (119A11), horse anti-mouse and horse anti-rabbit secondary antibodies, Alexa Fluor 488-conjugated goat anti-rabbit and Alexa Fluor 488-conjugated goat anti-mouse secondary antibodies were purchased from Cell Signaling Technology, Inc. Anti-ATF4 primary antibody (sc-390063) was purchased from Santa Cruz Biotechnology, Inc. Primary antibodies against vimentin (10366-1-AP), β-actin (66009-1-Ig) and Neural cadherin (N-cadherin; 22018-1-AP) were purchased from ProteinTech Group, Inc.
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2

Immunofluorescence Staining of Cells and Tissues

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Lens cryosections or slides of cultured cells were fixed with acetone for
15 min at RT, permeated with 0.5% Triton X-100 for 10 min and
blocked with 1% bovine serum albumin (BSA) for 1 h. Afterwards, the
sections or cell slides were incubated with different primary antibodies at
4 °C for overnight in a humidity chamber. Next day, secondary
antibodies Alexa Fluor 488-conjugated goat anti-rabbit or Alexa Fluor
555-conjugated donkey anti-mouse antibodies (Cell Signaling Technology) were
incubated for 1 h at RT. After washing with PBS, the lens cryosections or
cell slides were incubated with DAPI for nuclear staining and mounted with
anti-fade mounting medium. The slides were observed using a laser scanning
confocal microscopy (LSCM; LSM510, Carl Zeiss).
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3

Immunodetection of Neurotrophin Receptors

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Anti-Rhodopsin (MS-1233-P; Ab-1 (RET-P1); Neomarkers, Fremont, CA, USA); anti-trkANGFR (sc-118; Santa Cruz Biotech, Santa Cruz, CA, USA); anti-phospho trkANGFR (p-trkANGFR; sc-130222; Santa Cruz); anti-p75NTR (sc-6188; Santa Cruz); and anti-GAPDH (sc-365062; Santa Cruz). Alexa Fluor 488-conjugated goat anti-rabbit and Alexa Fluor 594-conjugated goat anti-mouse as well as horseradish peroxidase-conjugated anti-rabbit/mouse specie-specific secondary antibodies (Cell Signaling Technology, Danvers, MA, USA).
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4

Investigating Epigenetic Regulation in TGF-β-Induced EMT

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Recombinant human TGF-β1 and TGF-β2 were purchased from Cell Signaling (Danvers, MA, USA). Tricostatin A (a class I and II HDAC inhibitor) was purchased from Sigma-Aldrich (Louis, MO, USA). Antibodies against HDAC1, HDAC2, HDAC5, cyclin D1, cyclin-dependent kinase (CDK) 4, CDK6, P21, P27, p-Rb, Jagged1, Notch3, p-Smad2/3, Snail, Slug, p-Akt, Akt, p38MAPK, p-p38MAPK, ERK1/2, p-ERK1/2, horse antimouse and goat anti-rabbit horseradish peroxidase (HRP)-conjugated secondary antibodies, Alexa Fluor 488–conjugated goat anti-rabbit and Alexa Fluor 555–conjugated donkey antimouse secondary antibodies were purchased from Cell Signaling Technology (Beverly, MA, USA). Antibodies against β-actin, α-SMA, collagen type I (Col I), collagen type IV (Col IV), vimentin and fibronectin (FN) were purchased from Abcam (Cambridge, UK). Cell counting kit-8 (CCK-8) was purchased from Dojindo (Shanghai, China).
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5

Immunofluorescence Staining of Lens Capsules

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For whole mount lens anterior capsules, the anterior capsules were blocked and permeated with incubation of 1% Triton X-100 in 1% BSA for 1 h at RT. Primary antibodies diluted in PBS were added to immerse the tissues entirely and incubated for 12–24 h at 4°C. On the following day, capsules were washed with PBS containing 0.1% Tween20 (PBST) for 30 min on a rocking board, thereafter, incubated with appropriate secondary antibodies (diluted 1:200 with PBS) for 1 h at RT. After washing with PBST for 30 min, capsules were incubated with sufficient volume of DAPI for 10 min to stain the nuclei. Finally, the whole anterior capsule was placed flat on a microscope slide using forceps under a dissecting microscope. The residual PBS on the slide was removed, and the capsule was covered with a coverslip after adding a drop of anti-fade mounting medium. The slides were stored at −20°C in the dark until examination using a fluorescence microscope and a LSCM within a few days.
Primary antibodies against α-SMA, collagen type I (Col I), and vimentin were purchased from Abcam (Cambridge, UK). Alexa Fluor 488-conjugated goat anti-rabbit and Alexa Fluor 555 conjugated donkey anti-mouse secondary antibodies were purchased from Cell Signaling (Danvers, MA).
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