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6 protocols using thapsigargin tg

1

Measuring Store-Operated Calcium Influx

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The calcium assay was performed as described previously.50 (link) The cells were plated onto gelatin-coated 30 mm plates 1 day before the experiments. The cells were washed with Tyrode's solution and incubated with 4 μM Fluo-4 AM (Invitrogen) or Fura-4 AM (Invitrogen) for 30 min at room temperature. The cells were then washed with Tyrode's solution. To measure store-operated Ca2+ influx, 4 mM EGTA and 4 mM thapsigargin (TG) (Abcam) were added to deplete internal calcium stores. Ca2+ influx was induced by the subsequent addition of 2 mM Ca2+ (free) after store depletion. The change in calcium fluorescence was monitored using a confocal fluorescence imaging microscope (LSM710, ZEISS), which was performed in Professor Heping Cheng’s laboratory at the Institute of Molecular Medicine, Peking University.
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2

Integrin-Mediated Cellular Dynamics

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2-Amino-ethoxydiphenyl borate (2-APB, 100 µM), Nifedipine (10 µM), LaCl3 (100 µM), Cytochalasin D (1 µM), Blebbistatin (20 µM), Nocodazole (1 µM), ML-7 (20 µM), the ROCK inhibitor Y27632 (20 µM), and phalloidin-TRITC were purchased from Sigma-Aldrich. Thapsigargin (TG, 10 µM) was purchased from Abcam, U73122 (10 µM) from MedChemExpress, and fibronectin from Corning. ITGB1 (Beta1) siRNA (Integrin siRNA, 30 nM) was purchased from Thermo Fisher Scientific.
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3

Primary Airway Smooth Muscle Cell Culture

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Primary airway smooth muscle (ASM) cells were originated from 6–8-week-old Sprague–Dawley rats, as described previously (approved by the Ethics Committee of Changzhou University on Studies Ethics, Grant No. NSFC 11532003) (Wang et al., 2016 (link)). ASM cells were cultured in low-glucose DMEM (Invitrogen) supplemented with 10% FBS and penicillin/streptomycin antibiotics. The cells were maintained in the humidified culture incubator, containing 5% CO2 at 37°C. The cells applied in the experiments were generally within 10 passages during regular culture.
Matrigel was purchased from BD Biotechnology, and type I collagen was from Advanced Biomatrix. The chemical reagents 2-amino-ethoxydiphenyl borate (2-APB, #D9754-10G), nifedipine (#N7634-1G), cytochalasin D (1 µM), blebbistatin (20 µM), and ML-7 (20 µM) were purchased from Sigma-Aldrich, and thapsigargin (TG, #ab 120286) from Abcam. ON-TARGETplus SMARTpool N-cadherin siRNA (N-cadherin siRNA, #M-091851-01-0005) was purchased from Horizon Discovery. Integrin β1 (ITGB1) siRNA (#AM16708) was purchased from Thermo Fisher Scientific.
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4

Investigating UPR Pathway Regulation

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Antibodies against GRP78 (ab21685), ATF6 (ab122897), p-PERK (ab192591) and p-eIF2α (Ser51) (ab32157) were obtained from Abcam (Cambridge, UK). Antibodies against total PERK (sc-13073) were purchased from Santa Cruz Biotechnology (Dallas, TX, USA). Antibodies against p-IRE1 (S724) (CY5605), eIF2α (AB3335), and β-actin (AB0061) were purchased from Abways Technology (Shanghai, China). Antibodies against total IRE1 (3294S) were purchased from Cell Signaling Technology (Danvers, MA, USA). Thapsigargin (Tg) (Abcam, ab120286), GSK2606414 (HY-18072) (MedChem Express, Monmouth Junction, NJ, USA), APY29 (HY-17537) (MedChem Express, Monmouth Junction, NJ, USA) and 4μ8C (HY-19707) (MedChem Express, Monmouth Junction, NJ, USA) were dissolved in DMSO.
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5

Cell Line Characterization and Reagents

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Flp-In T-REx U2OS cells were kindly provided by Dr. Gopal Sapkota (University of Dundee); HeLa and C2C12 myoblasts were from ECACC (European Collection of Cell Cultures) and distributed by Sigma-Aldrich (St. Louis, MO, USA); All cell lines were tested for contamination before carrying out the experiments shown in this report. PD0325901 was purchased from Axon Medchem (Groningen, The Netherlands); Fura-2-acetoxymethyl ester (fura-2-AM) was from Calbiochem, a brand belonging to Merck Millipore (Darmstadt, Germany); Thapsigargin (Tg) and SKF96365 were from Abcam Biochemicals (Cambridge, UK); Polyethylenimine was purchased from Polysciences, Inc (Eppelheim, Germany); Collagen, type I, was purchased from Sigma-Aldrich (St. Louis, MO, USA). GFP-Trap resin was from Chromotek GmbH (Planegg-Martinsried, Germany).
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6

SH-SY5Y Cell Culture and Characterization

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SH-SY5Y cells were purchased from European Collection of Cell Cultures (ECACC) and distributed by Sigma-Aldrich (St. Louis, MO, USA); Phoenix-AMPHO HEK293 were from American Type Culture Collection (ATCC); all-trans-retinoic acid, human brain-derived neurotrophic factor (BDNF), collagen (type I), Dulbecco’s modified Eagle’s medium (DMEM), DMEM:F-12 Ham medium, and nifedipine were purchased from Sigma-Aldrich (St. Louis, MO, USA); fura-2-acetoxymethyl ester (fura-2-AM) and BTP2 were from Merck Millipore (Darmstadt, Germany); thapsigargin (Tg) was from Abcam Biochemicals (Cambridge, UK); ML 218 and ω-conotoxin MVIIC were from Tocris Bioscience (Bristol, UK); rhodamine 123, tetramethylrhodamine methyl ester (TMRM), Hoechst 33258, Hoechst 33342, and 5-dodecanoylaminofluorescein di-β-d-galactopyranoside (C12FDG) were from Thermo Fisher Scientific (Waltham, MA, USA); Clarity Max™ Western ECL substrate was from Bio-Rad (Hercules, CA, USA).
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