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6 protocols using anti il 1

1

Western Blot Analysis of Apoptosis Markers

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Proteins were extracted from HCN cells and the protein concentrations were assessed using a BCA assay kit (TaKaRa BIO INC, Japan). The protein samples were resolved in a 10-12% sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis. Proteins were then transferred to polyvinylidene fluoride (PVDF) membrane, and blocked with 5% nonfat milk in Trisbuffered saline-Tween (TBST) 20 for 2 h at room temperature. Membranes were then incubated with primary antibody overnight. The antibodies were shown as follows: anti-Caspase-3, anti-Bcl2, anti-IL1, anti-IL6 and anti-NF-kb (1:1000; Santa Cruz Biotechnology,USA). An anti-GAPDH antibody was used as a loading control. Membranes were washed and incubated for 2 h in the presence of appropriate horseradish peroxidase (HRP)-conjugated secondary antibody. The positive reaction was visualized by using 3, 3’-diaminobenzitine (DAB) solution (Sigma, St. Louis, MO) with a chemiluminescent Immobilon Western blotting detection system.
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2

Western Blot Analysis of Cellular Signaling

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Tissues were homogenized using TissueLyzer II (Qiagen, Hilden, Germany). Cells and tissues were lysed using the radioimmunoprecipitation assay (RIPA) buffer (30 mM Tris [pH 7.5], 150 mM sodium chloride, 1 mM sodium phenylmethylsulfonyl fluoride, 1 mM sodium orthovanadate, 1% Nonidet P-40, 10% glycerol, and phosphatase and protease inhibitors). Western blot analyses were performed with 40 μg of protein, using commercially available antibodies. Anti-CHOP, anti-pERK, anti-ERK, anti-IRE1α, anti-pIRE1α, anti-pSMAD2/3, and anti-β-actin antibodies were obtained from Cell Signaling Technology (Beverly, MA, USA). Anti-NDUFA, anti-SDHA, anti-UQCR2, and anti-ATP5A antibodies were purchased from Abcam (Cambridge, UK). Anti-COL1A2, anti-COL1A1, anti-ATF4, anti-TGF-β1, and anti-IL-1 antibodies were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Peroxidase-conjugated secondary antibodies were purchased from Santa Cruz Biotechnology. Immunoreactive bands were visualized using enhanced chemiluminescence (ECL; Bio-Rad, Hercules, CA, USA). Images were scanned using the Odyssey imaging system and quantified using Image Studio Digits (LI-COR Biosciences, Lincoln, NE, USA).
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3

Western Blot Analysis of Inflammatory Proteins

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Brain tissues from frontal cortex of mice were lysed in a cold lysis buffer containing 1% protease inhibitor cocktail (Sigma). The extracted proteins were separated by electrophoresis with the 12% SDS-PAGE and transferred onto nitrocellulose membranes. The target proteins were measured using the primary antibodies of anti-IL-1 (1 : 1000, Santa Cruz) or GFAP (1 : 1000, Santa Cruz) and the corresponding secondary antibody, followed by development with an ECL kit (PerkinElmer). The antibodies against β-actin (1 : 4000, Santa Cruz) or GAPDH (1 : 4000, Abcam) were used here as an internal control. Quantitative results are expressed as a ratio of target proteins to their internal controls accordingly.
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4

Quantifying Immune Markers Expression

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The CD163, IL-1, IL-6 and FGF-2 expression was observed with indirect immunohistochemistry staining under light microscope with a magnification of 400x. The expression was visualized using AxioVision software to calculate the percentage area by single blinded operator in the five different fields. Antibody CD163 (antiCd163, mouse monoclonal, Santa Cruz biotechnology), IL-1 (antiIL1, mouse polyclonal, Santa Cruz biotechnology) and IL-6 (antiIL-6, mouse monoclonal, Santa Cruz biotechnology) and FGF-2 (antiFGF-2, mouse monoclonal, Santa Cruz biotechnology) were used.
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5

Immunohistochemical Evaluation of Angiogenic Markers

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The specimens were incubated with a blocking solution (1% BSA, 0.5% Tritonx-100, and 10% normal goat serum in PBS 0.1M), and then the slices were incubated overnight at 4 °C with a solution containing rabbit polyclonal anti-VEGF-C primary antibody (1:50, Santa Cruz Biotechnology, Inc., Dallas, TX, USA) or anti-IL-1ß (1:50, Santa Cruz Biotechnology, Inc.) or anti-PDGFR (1:100, Abcam, Cambridge, UK) or anti-TGF- ß (1:100, Bioss Antibodies, Woburn, MA, USA) or pSTAT3 (1:100, Cell Signaling, Beverly, MA, USA). All the primary antibodies used cross-reacted with human tissue. All specimens were incubated at room temperature for 2 h in labeled conjugated goat anti-rabbit secondary antibodies (AlexaFluor488 or 546, IgG, Invitrogen, Waltham, MA, USA) diluted 1:400 in 0.1 MPBS and DAPI stained (1:500 in 0.1 M PBS). Images (20 or 60×) were obtained with a confocal laser scanning system (NIKON TE, Confocal Head A1 MP, Tokyo, Japan) with an Ar/ArKr laser (for 488 nm excitation) and a HeNe laser (for 543 nm excitation). DAPI staining was imaged by two-photon excitation (740 nm, o140 fs, 90 MHz) performed with an ultrafast tuneable mode-lockedTi: sapphire laser (Chameleon, Coherent Inc., Santa Clara, CA, USA).
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6

Western Blot Analysis of Key Proteins

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Protein samples (30 µg of protein/sample) were separated by 10% SDS-polyacrylamide gel electrophoresis (SDS-PAGE). Proteins were then blotted onto nitrocellulose membranes (90 min at 110 V) using standard procedures. Membranes were blocked in PBST (PBS with 0.1% Tween) containing 5% non-fat dry milk for 90 min and incubated overnight at 4 °C with primary antibodies: anti-ß-galactosidase (Santa Cruz Biotechnology, Dallas, TX, USA, Cat# sc-65670, RRID:AB_831022IBA1), anti-IκBα (Santa Cruz Biotechnology, Dallas, TX, USA, Cat# sc-1643, RRID:AB_627772), and anti-IL-1ß (Santa Cruz Biotechnology, Dallas, TX, USA, Cat# sc-52012, RRID:AB_629741). The day after, blots were rinsed three times with PBST and incubated for 2 h at rt with HRP-conjugated secondary antibodies and then detected by chemiluminescence detection system (Life Technologies Italia, Monza, Italy). Signal intensity (pixels/mm2) was quantified using ImageJ (NIH). The signal intensity was normalized to that of GAPDH (1:5000 Santa Cruz Biotechnology, Dallas, TX, USA) [25 (link)]. The treatments were carried out in three independent experiments (n = 4), and protein expression was calculated by normalizing the values to the mean of the control [20 (link)].
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