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22 protocols using pe anti mouse cd8a

1

Characterization of Tumor-Infiltrating Immune Cells

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Seven days after challenging mice with 4T1 tumor, the inguinal lymph nodes and spleen were isolated and dissociated into single cells by mashing through cell strainers (70 μm). The cell suspension of inguinal lymph nodes was stained with APC anti-mouse CD3 (BioLegend), PE anti-mouse CD8a (BioLegend), PE/Cy7 anti-mouse CD62L (BioLegend), FITC anti-mouse/ human CD44 (BioLegend) and APC anti-mouse CD11c, FITC anti-mouse CD80, PE anti-mouse CD86 and APC anti-mouse CD3, PE anti-mouse CD8a, respectively. The cell suspension of spleen was stained with APC anti-mouse CD3 (BioLegend), PE anti-mouse CD8a (BioLegend). The percentage of CD3+CD8+CD44highCD62low cells, CD11c+CD80+CD86+ cells, and CD3+CD8+ corresponding to effector memory T cells, DC cells, CD8+ T cells was analyzed, respectively.
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2

Quantifying Tumor-Infiltrating T Cells

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Female Balb/c mice were immunized with the vaccine candidates four times. One week later, the spleens were isolated and splenocytes were collected. The cells were then stained with APC anti-mouse CD3e (Biolegend) and PE anti-mouse CD8a (Biolegend). The cells were washed three times and re-suspended in 500 μL FACS buffer for analysis using a BD LSR Fortessa flow cytometer and data were processed in Flow Jo software.
The ratio of tumor-infiltrating lymphocytes (TILs) were also tested. Briefly, tumor tissues were isolated and cut into pieces. The pieces were filtered through 70 μm mesh. The cells were then centrifuged and washed three times. Subsequently, the cells were stained with APC anti-mouse CD3e (Biolegend) and PE anti-mouse CD8a (Biolegend). The cells were washed three times and re-suspended in 500 μL FACS buffer for analysis using a BD LSR Fortessa flow cytometer and data were processed in Flow Jo software.
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3

Tumor-Induced Immune Responses in Mice

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After challenging mice with 4T1 tumours for seven days, the inguinal lymph nodes and spleens were isolated and dissociated into single cells by mashing through cell strainers (70 μm). The inguinal lymph node and spleen cell suspensions were stained with APC anti-mouse CD3 (Biolegend), PE anti-mouse CD8a (Biolegend), PE/Cy7 anti-mouse CD62L (Biolegend), FITC anti-mouse/human CD44 (Biolegend), APC anti-mouse CD11c, FITC anti-mouse CD80, PE anti-mouse CD86 and APC anti-mouse CD3, and PE anti-mouse CD8a. The percentages of CD3+CD8+CD44+CD62− cells, CD11c+CD80+CD86+ cells, and CD3+CD8+ cells corresponding to effector memory T cells, DCs, and CD8+ T cells, were analysed by flow cytometry.
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4

Isolation and Characterization of Mouse Splenocytes

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The mouse splenic suspension was obtained by forcing the spleen through a 200-mesh stainless steel mesh and prepared in PBS. The suspension was centrifuged for 3 min at 4 °C with 900 rpm and then the Tris-NH4Cl red cell lysis solution was added to remove red blood cells. The solution was centrifuged again and the supernatant was discarded. After gently washed with PBS, the splenic cell pellets were collected. The isolated splenocytes were suspended in sterile PBS and stained with APC anti-mouse CD3ε, FITC anti-mouse CD4 or PE anti-mouse CD8a antibodies (BioLegend Inc, San Diego, CA, USA) for 30 min at 4 °C in the dark, washed with PBS and detected by MACSQuant™ flow cytometer (Miltenyi Biotec Co. Ltd., Bergisch Gladbach, Germany). The data were analyzed with FlowJo software (FlowJo VX, Tree Star Inc., Ashland, OR, USA).
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5

Comprehensive Murine Immune Phenotyping

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Cell suspensions were counted and incubated in 1% BSA/DPBS for 30 min at 4 °C to block non-specific binding. The cells were incubated with FITC anti-mouse CD45 (157,214, Biolegend), APC-anti-mouse CD3 (100,236, Biolegend), PE/CY5.5 anti-mouse CD4 (100,434, Biolegend), and PE anti-mouse CD8a (100,708, Biolegend) and subsequently permeabilized with a suitable buffer (Biyuntian, China) ; moreover, they were incubated overnight with PE anti-mouse Foxp3 (126,404, Biolegend) and BV421 anti-mouse T-bet (644,815, Biolegend) antibodies at 4 °C for intracellular staining. To analyze cytokine secretion, the cells were stimulated with Monensin (420,701, Biolegend) and a cell activation cocktail (423,301, Biolegend), followed by surface staining, fixation, and permeabilization as described. The cells were the incubated overnight with PE anti-mouse INF-γ (505,808, Biolegend), BV421 anti-mouse IL-4 (504,119, Biolegend), and PE/CY7 anti-mouse IL-17 A (506,922, Biolegend) antibodies at 4 °C. The data was analyzed using Flowjo software (Tree Star Inc., San Carlos, CA).
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6

Pancreatic Lymphocyte Isolation and Analysis

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Pancreatic lymphocytes were isolated after pancreas perfusion and cells were stained using PE anti-mouse CD8a and FITC anti-mouse CD69 (Biolegend), as detailed in the ESM Methods. Populations were determined by using BD FACSCanto II and BD FACSDiva software (BD Biosciences).
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7

Multiparametric Flow Cytometry Analysis of Mouse Immune Cells

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100 μL of peripheral blood sample was lysed by RBC Lysis Buffer, cells were collected and suspended in Cell Staining Buffer (BioLegend, Cat# 420201). Flow cytometry was performed performed on FACS Aria III (Becton Dickinson) using standard methods. For detection of surface antigens, cells were washed and stained with saturating amounts of antibodies conjugated with fluorescein in the presence of FcR-specific blocking antibody for 20 min on ice. Antibodies used were as follows: Alexa Fluor-488 anti-mouse Gr-1 (Biolegend, Cat# 108417, clone: RB6-8C5, 1:100), PE anti-mouse CD19 (Biolegend, Cat# 152408, clone: 1D3/CD19, 1:100), Alexa Fluor-647 anti-mouse CD3ε (Biolegend, Cat# 100322, clone: 145-2C11, 1:100), PE anti-mouse CD8a (Biolegend, Cat# 100708, clone: 53-6.7, 1:100), Alexa Fluor-488 anti-mouse CD4 (Biolegend, Cat# 100423, clone: GK1.5, 1:100), Alexa Fluor-647 anti-mouse c-Kit (Biolegend, Cat# 105818, clone: 2B8, 1:100), APC anti-mouse CD25 (Biolegend, Cat# 102012, clone: PC61, 1:100), PE/Cy5 anti-mouse/human CD44 (Biolegend, Cat# 103010, clone: PC61, 1:100), Alexa Fluor-647 anti-mouse/human Foxp3 (Biolegend, Cat#320013, clone: 150D, 1:100), PE anti-mouse/human CCR4 (Biolegend, Cat# 131203, clone: 2G12, 1:100). The data were analyzed by FlowJo_V10 software. The gating strategy are shown in Supplementary Fig. 6.
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8

Pancreatic Lymphocyte Isolation and Analysis

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Pancreatic lymphocytes were isolated after pancreas perfusion and cells were stained using PE anti-mouse CD8a and FITC anti-mouse CD69 (Biolegend), as detailed in the ESM Methods. Populations were determined by using BD FACSCanto II and BD FACSDiva software (BD Biosciences).
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9

Evaluating Immunomodulatory Effects of PLP and TAXOL® on Breast Tumors

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4- to 6-week-old female BALB/c mice were used for the breast tumor-bearing model. Subcutaneous tumor models were established by inoculating 5 × 105 4T1 cells into the right flanks of the BALB/c mice. When tumor size reached approximately 100–200 mm3 in volume, the mice were administered physiological saline, PLP (10 mg/kg/d, s.c.) once every 24 h, and TAXOL® (Harbin Pharmaceutical Group Holding Co., Ltd., Heilongjiang, China, 6 mg/kg, i.p.) and TAXOL®+PLP once every 4 days. Mice were closely monitored every other day for pain/distress, tumor volume, and body weight. The tumor volume was calculated using the following formula: mm3 = (longest diameter × shortest diameter2)/2. Mice were sacrificed at Day 22. Tumors were removed and weighed, and tumors, spleens, and inguinal lymph nodes were excised for flow cytometer analysis of immune cell subpopulations. Cells were proceeded to be incubated with FITC anti-mouse CD11c, APC anti-mouse CD3, PE anti-mouse CD8a, PerCP/Cyanine5.5 anti-mouse CD4, FITC anti-mouse IFN-γ, PE/Cyanine7 anti-mouse CD11b, and PE anti-mouse F4/80 antibodies (Biolegend, United States) for 30 min at 4°C in the dark. Cellular supernatant was collected for IFN-γ ELISA analysis.
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10

Comprehensive Immune Checkpoint Modulation

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Chloroform, PVA, PLGA, PLL, and poly(I:C) were obtained from Sigma-Aldrich (St Louis, MO, USA). The following individual primary antibodies were purchased: anti-mouse PD-L1 (Cell Signaling, Danvers, MA, USA) and anti-mouse CD8a (eBioscience, San Diego, CA, USA). PE anti-mouse CD8a, FITC anti-mouse CD8a, FITC anti-mouse PD-L1, and APC anti-mouse INF-γ antibodies were obtained from BioLegend (San Diego, CA, USA). Recombinant murine IL-2 was obtained from PeproTech (Cranbury, NJ, USA). All oligoes were purchased from Bioneer Co. (Tae-Geon, Korea) and the sequences of siRNA were as follows: 5′-GCAGUGACCAUCAAGUCCUdTdT-3′ (human sense siPD-L1), 5′-dTdTAGGACUUGAUGGUCACUGC-3′ (human antisense siPD-L1), 5′-CCUACGCCACCAAUUUCGUdTdT-3′ (scrambled sense siRNA), 5′-dTdTGGAUGCGGUGGUUAAAGCA-3′ (scrambled antisense siRNA).
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