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6 protocols using cd19 apc

1

Characterization of B Cell Subsets

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B cells were isolated from PBMCs using a B cell isolation kit II (Miltenyi Biotec) with a resulting purity of >99%. Given that the number of B cells were limited, B cell subsets were analyzed from a fraction of the total number of subjects, as indicated in the results. The following subsets were analyzed using a BDLSRII flow cytometer: CD19+CD27+IgD+ (memory B cells), CD19+CD27IgD+ (naïve B cells), and CD19+ CD38+ CD27+IgD (plasma cells). All fluorophore conjugated antibodies were obtained from Biolegend or Miltenyi Biotech and consisted of: CD19 (APC), CD27(Pacific Blue), CD38 (FITC) and IgD (PE-Cy7).
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2

Phenotyping of Neutrophil Subsets

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To investigate the phenotype of neutrophils, freshly isolated NDGs and LDGs were incubated with the following antibodies for 30 minutes on ice: CD10-PerCP-Cy5.5 (clone HI10a, BD Pharmingen, 25μg/mL), CD15-PE-Vio770 (clone VIMC6), CD16-VioGreen (clone REA423), CD33-FITC (clone REA775), CD62L-VioBlue (clone 145/15), CD63-PE (clone REA1055) and CD66b-APC (clone REA306), all Miltenyi Biotec, Germany. Flow cytometry was performed using the MACSQuant® flow cytometer (Miltenyi Biotec, Germany). Data analysis was performed with FlowJo software (TreeStar, CA, version 10.6.1). To determine the absolute numbers of NDGs from peripheral blood, Truecount TM tubes (BD Biosciences) were used according to the manufacturer’s instructions after staining full blood with CD45-FITC (clone REA747), CD16-VioGreen (clone REA423) and CD19-APC (clone REA675, all Miltenyi Biotec) and lysis with immediate fixation using the Fix/Lyse Solution (Invitrogen). In contrast, absolute numbers of LDGs were determined by calculating the percentage of CD15+ LDGs contained in the PBMC-layer from the absolute number of CD45+ PBMCs as determined by Truecount assessment.
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3

FACS Analysis of Experimental EBA

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For FACS analysis, healthy and lesional skin (both from corresponding anatomical sites) or blood was taken from mice after induction of experimental EBA. Single cell solutions from and blood were erythrocyte lysed with RB cell lysis buffer (Miltenyi). The skin samples were cut into small pieces and digested with 345 mg/ml liberase (Roche) in RPMI for 30 min/37°C. Single cells were stained for the following surface markers using standard FACS procedures: CD45-VioGreen (clone: 30F11), CD3-VioBlue (clone: 17A2), Ly6C-FITC (clone: 1G7.G10), as well as Ly6G-APC Vio770 (clone: 1A8) and for blood CD19-APC (clone: 6D5), all from Miltenyi. For the subsequent intracellular staining, the cells were fixed in fixation buffer (BioLegend) and permeabilized using the Intracellular Staining Perm Wash Buffer (BioLegend) following the manufacturer’s protocol. Intracellular staining was performed with SYK-PE (clone: 4D10.2). Cells were first gated for scatter (SSC-A/FSC-A) and singlets (FSC-H/FSC-A). The CD45+ gates were further analyzed for double-positive staining of SYK with the appropriate cell markers. Measurements were performed at the Miltenyi MacsQuant10, and data were analyzed with the MACSQuantify™ Software (version 2.8).
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4

Quantifying Human Cell Engraftment in Mice

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The mice were killed at the end of the xenograft procedure (6 months). Bone marrow contents from tibiae, femora and humeri were collected. The human chimerism was determinated using FACS flow (quanto II, BD) with the following antibodies human CD45 (CD45-Viogreen™, Miltenyi Biotec), murine CD45 (CD45 PeRCP-Vio700, Miltenyi Biotec), human CD33 (CD33-PE, Miltenyi Biotec) and human CD19 (CD19-APC, Miltenyi Biotec). As already described in previous studies, we have chosen a threshold of 0.01% of human cells to define a human engraftment in mice [13 (link)]. Aliquot of each bone marrow were stained with May-Grunwald-Giemsa (MGG) by an automatized way (Aerospray®Pro, Elitech). Then, the % of human’s blasts were counted and the morphology of the cells was described by a trained cytologist.
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5

Isolation and Characterization of B Cell Subsets

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CD19+ B cells were purified from peripheral blood, lymph node or tonsil as in [18] (link). B-cell subsets isolated: centroblast CD10+CD44loCXCR4+ and centrocyte CD10+CD44loCXCR4[18] (link), naive CD27CD5 and memory CD27+CD5[49] populations. Specifically, CD19+ B cells were purified from lymph node by mechanical dissociation and flushing of the tissue with sort buffer (PBS, 1% FBS, 2 mM EDTA), followed by two rounds of red blood cell lysis (155 mM NH4Cl, 10 mM KHCO3, 0.1 mM EDTA) for 10 minutes each. Peripheral blood was subjected to at least four rounds of red blood cell lysis. CD19+ B cells were then purified from PBMCs via an EasySep CD19+ Positive Selection Kit (StemCell Technologies cat. 17854) or using CD19 MicroBeads (Miltenyi Biotec cat. 130-050-301) per the manufacturer's instructions to >90% purity as assessed by flow cytometry (CD19-APC, Miltenyi Biotec cat. 130-110-351). Tonsillar tissues were mechanically disrupted and subjected to red blood cell lysis. B cell subsets were isolated by CD19 MicroBeads and fluorescence activated cell sorting to collect CD10+CD44loCXCR4+ (Centroblast), CD10+CD44loCXCR4− (Centrocyte), CD27-CD5- (Naive), and CD27+CD5- (Memory) populations. Due to yield constraints, some samples were not subjected to all assays.
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6

Flow Cytometry Immunophenotyping Panel

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MACSQuant Analyzer, MACSQuant Analyzer VYB (Miltenyi Biotec), or FACSCanto, LSRII (Becton Dickinson, NJ) was used to analyze cell populations by flow cytometry. The following antibody and protein conjugates were used: CD3-PE, CD3-APC-Vio770, CD4-APC, CD4-VioGreen, CD8-APC-Vio770, CD8-VioGreen, CD14-APC, CD16-PE, CD19-APC, CD20-PerCP-Vio770, CD20-PE-Vio770, CD34-APC, CD34-PE, CD45-VioBlue, CD45-VioGreen, CD45RO-PE-Vio770, CD56-PE, CD62L-VioBlue, CD95-APC, CD45-VioBlue (mouse) (all from Miltenyi Biotec); ErbB2-Fc fusion protein (R&D Systems), anti-human-IgG (Fc gamma-specific) PE (eBioscience). 7AAD staining was used for dead cell exclusion and Violet Cell Trace (Thermo Fisher) for SupT1 cell tracking.
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