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Bolt 4 12 bis tris plus gradient gel

Manufactured by Thermo Fisher Scientific
Sourced in United States

The Bolt™ 4–12% Bis-Tris Plus gradient gels are pre-cast polyacrylamide gels designed for protein separation and analysis. They feature a gradient of 4-12% acrylamide concentration, providing a wide separation range for proteins. The gels are formulated with Bis-Tris buffer system and are compatible with common electrophoresis protocols.

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6 protocols using bolt 4 12 bis tris plus gradient gel

1

SARS-CoV-2 Spike and Membrane Protein Detection

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Samples were resolved on BoltTM 4–12% Bis-Tris Plus gradient gels (Invitrogen, Waltham, MA, USA). Gels were either stained with Coomassie brilliant blue or subjected to Western blot using appropriate antibodies: rabbit polyclonal anti-SARS-CoV-2 S antibody (Abcam ab272504, Cambridge, UK) or rabbit polyclonal anti-SARS-CoV/CoV2 M antibody (Novus Biologicals NB100-56569, Littleton, CO, USA).
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2

Western Blot Analysis of Cell Signaling

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Cells were lysed in RIPA buffer containing protease inhibitors and phosphatase inhibitors (Sigma-Aldrich). Protein quantification was performed using a BCA assay (Thermo Scientific). Lysates were loaded into BoltTM 4–12% Bis-Tris Plus gradient gels (Invitrogen) and run for 2h at 110 volts. Proteins were transferred to PVDF membranes. 2% milk or BSA was utilized for blocking, and blots were incubated with pSTAT1Y701 (58D6 1:1000, Cell Signaling Technology Cat# 9167, RRID:AB_561284), STAT1 (STAT1–79 1:1000, Cell Signaling Technology Cat# 9172, RRID:AB_2198300), PD-L1 (E1L3N 1:1000, Cell Signaling Technology Cat# 13684, RRID:AB_2687655), β-actin (AC-15 1:10000, Sigma-Aldrich Cat# A3854, RRID:AB_262011) and GAPDH (D16H11 1:2000, Cell Signaling Technology Cat# 5174, RRID:AB_10622025) antibodies at 4°C overnight. Blots were visualized and imaged using a Bio-Rad ChemiDocTM MP Imaging System. The integrated density of the blot signals was quantified using ImageJ software (RRID:SCR_003070).26 (link)
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3

Neuronal Cell Lysis and Protein Extraction

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Mouse cortical neuronal cells (T4) and primary cortical neurons were washed once with PBS and lysed with modified RIPA buffer (10 mM Tris-HCl [pH 7.4], 150 mM NaCl, 1 mM EGTA, 1% NP-40, 0.25% sodium deoxycholate, 0.1% SDS) containing 1 mM NaF, 1 mM Na3VO4, 1 mM PMSF and 10 μg/ml each of aprotinin, leupeptin and pepstatin. Proteins were extracted on ice with periodic vortexing for 30–40 min, and lysates were cleared by centrifugation at 10,000 × g for 10 min at 4 °C, and the supernatants were used for immunoblotting following boiling in 1x SDS-sample loading buffer for 5 min. For analysis protein samples (40 μg) were separated on Bolt® 4–12% Bis-Tris Plus gradient gels (Invitrogen) at a constant current of 20 mA followed by transfer to nitrocellulose membranes (GE Healthcare) and immunoblotting with the indicated antibodies. Blots were developed with chemiluminescence (GE Healthcare). All protein concentrations were determined using the BCA method (Sigma).
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4

Detailed Western Blotting Protocol

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Western blotting was performed largely as described previously13 (link). Protein lysates were prepared by lysing astrocytes with boiling 1× Laemmli buffer (Boston BioProducts, #BP-111R) followed by boiling at 95 °C for 5 min. SDS–PAGE was performed using Bolt 4–12% Bis-Tris Plus gradient gels (Invitrogen, #NW04125BOX). Western blotting was performed by transferring proteins onto a PVDF membrane (Millipore, #IPVH15150) in 1× NuPAGE buffer (Thermo Fisher, #NP00061). Membranes were blocked in 10% milk (Laboratory Scientific, #M0841) in TBS-T (Boston BioProducts, #IBB-180–2L). Primary antibodies used in this study were: rabbit anti-MAFG (Genetex, #GTX114541, 1:1,000), rabbit anti-GAPDH (Cell Signaling Technology, #2118S, 1:1,000), rabbit anti-cyclophilin B (Thermo Fisher Scientific, #PA1027A, 1:1,000), and rabbit anti-MAT2α (Novus Biologicals, #NB110–94158, 1:1,000). The secondary antibody used in this study was anti-rabbit IgG-HRP conjugate (Cell Signaling Technology, #7074S, 1:1,000). HRP-conjugated blots were developed using SuperSignal West Femto Maximum Sensitivity Substrate (Thermo Fisher Scientific, #34095) and CL-XPosure Film (Thermo Fisher Scientific, #34090). Some HRP-conjugated blots were developed using the KwikQuant imaging system (Kindle Biosciences). Film was developed using a M35A X-OMAT Film Processor (Kodak).
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5

MALDI-TOF/TOF Protein Identification

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Protein samples were loaded into BoltTM 4–12% Bis-Tris Plus gradient gel (Invitrogen), and the target protein gel band was excised and digested with trypsin as described40 (link). After cleanup steps using C18 ZipTips (Millipore), the samples were mixed with an equal amount of matrix solution containing 10 mg/ml R-cyano-4-hydroxycinnamic acid in 0.1% TFA/50% ACN and spotted onto a 384-well stainless steel MALDI target plate (Applied Biosystems, Foster City, CA). An ABI 4800 Proteomics Analyzer MALDI TOF/TOF mass spectrometer (Applied Biosystems) was used to analyze the samples. For protein ID, combined MS and MS/MS data were submitted via GPS Explorer (version 3.6, Applied Biosystems) to Mascot server (version 2.0, Matrix Science). The swissprot database (including 545536 sequences, 194023197 residues) was utilized for the search.
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6

Western Blot Analysis of Utf1 Protein

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Proteins were extracted from embryonic testes or kidneys using a lysis buffer containing 10 mM Tris-HCl, pH7.4, 150 mM NaCl, 1 mM EDTA, 1% SDS in 1X PBS and 0.5 mM PMSF. The extracted samples were loaded on BoltTM 4–12% Bis-Tris Plus gradient gel (Invitrogen) and electrophoretically transferred to PVDF membrane. The protein loading was analyzed by Panceau S staining. After blocking with Super Block T20 (TBS) Blocking buffer (Thermo), the membrane was probed with primary antibody anti-Utf1 from rabbit (1:500 dilution, a24273 ABCAM). The antibody was detected with anti-rabbit HRP-conjugated secondary antibody (Dako). WB for mouse histone H3 as loading control employed polyclonal rabbit anti mouse histone H3 antibodies (1:5000 dilution; ab1971 ABCAM).
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