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Peaq itc instrument

Manufactured by Malvern Panalytical
Sourced in United Kingdom

The PEAQ-ITC instrument is a microcalorimetry system designed for Isothermal Titration Calorimetry (ITC) analysis. It measures the heat effects that occur during interactions between molecules, providing data on the thermodynamics of binding processes. The instrument is capable of accurately detecting small heat changes, enabling the quantitative analysis of a wide range of biomolecular interactions.

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30 protocols using peaq itc instrument

1

Protein-DNA Binding Kinetics by ITC

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ITC assays were performed at 20 °C by using a Microcal PEAQ-ITC instrument (Malvern). Double-stranded oligo deoxynucleotides are added to the sample pool at a concentration of approximately 30 μM, and proteins are added to the syringe at a concentration of approximately 300 μM. A typical ITC experiment consisted of 19 drops, with one injection of 1 μl followed by 18 injections of 2 μl of protein sample. The integrated heat data were analyzed using a one-site binding model by MicroCal PEAQ-ITC Analysis Software provided by the manufacturer.
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2

Isothermal Titration Calorimetry of Proteins

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ITC measurements were performed on a Microcal PEAQ-ITC instrument (Malvern) at 298 K, with a reference power of 10 cal/s and a stirring speed of 750 rpm. Proteins and peptides were initially prepared in ITC buffer, containing 20 mM HEPES (pH 7.5) and 150 mM NaCl. Each titration typically involves 20 injections of 2 μL peptide with 4 s durations and 150 s intervals. The data fitting and analyses were performed using the MicroCal PEAQ-ITC Analysis Software.
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3

ITC Analysis of Protein Interactions

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ITC assays were performed on a Microcal PEAQ-ITC instrument (Malvern) at 20 °C. The concentrations of proteins were determined spectrophotometrically. HsRBFA and METTL15 proteins were dialyzed against buffer B and adjusted to 600 μM and 40 μM, respectively. SAM and METTL15 proteins were dialyzed against buffer B and adjusted to 500 μM and 50 μM, respectively. Thermodynamic data were analyzed with a single binding site model using MicroCal PEAQ-ITC Analysis Software provided by the manufacturer. The thermodynamic parameters of the ITC experiments were listed in Table 2.
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4

ITC Analysis of TPMT Variants

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The ITC experiments were performed using a PEAQ ITC instrument (Microcal). The samples were dialyzed against 20 mM KPi, 75 mM NaCl, 2 mM β-mercaptoethanol, 2% Glycerol, pH 7.3. The concentrations of TPMTwt, TPMT p.Y240C and TPMT p.Y240S in the cell were 27 μM, 29 μM and 25 μM respectively. A concentration of 250 μM SAM was used in the syringe. All measurements were performed at 25 °C, using reference power 7 μcal/s, 16 injections, 2.5 μl/injection and 150 s between each injection.
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5

ITC Binding Measurement of Purified Proteins

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ITC binding was measured using a Microcal PEAQ-ITC instrument (Malvern). The purified proteins were dialyzed against a buffer containing 100 mM NaCl, 20 mM HEPES, pH 7.0, and 2 mM β-mercaptoethanol and were diluted to a concentration of about 0.8–0.12 mM. The peptide was dissolved in the same buffer with a concentration of about 1.0–1.5 mM. All of the titrations were performed at 20 °C. The data were analyzed using the Origin 7.0 program.
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6

ITC-based Protein-Peptide Binding Analysis

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The ITC-based binding experiments were carried out on a Microcal PEAQ-ITC instrument (Malvern) at 25 °C. The protein samples were dialyzed overnight at 4 °C. The protein samples were then diluted to 0.1 mM, and the lyophilized peptides were dissolved with the same buffer with a final concentration of 1.0–1.5 mM. The titration was performed with the standard protocol, and the data were fit using the program Origin 7.0.
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7

Characterizing Protein-Protein Interactions

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ITC-binding curves were measured by using a Microcal PEAQ-ITC instrument (Malvern). Purified proteins were transferred to buffer containing 20 mM Hepes pH 7.5, 100 mM NaCl, and 2 mM β-mercaptoethanol by 5 mL desalting column (GE). Titrations were performed at 20 °C. Titration of GmPUB13(252-630) in the cell was performed by sequential addition of Avr1d, GmE2, and Avr1dF90A separately. Data were analyzed using Origin 7.0.
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8

Isothermal Titration Calorimetry Protocol

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ITC studies were performed using a MicroCal PEAQ-ITC instrument (Malvern, UK). Before performing any experiment, a system suitability test was performed as per the manufacturer’s recommendation (Figures S7 and S8 and Table S3). The samples were buffer-exchanged into PBS, pH 7.4, using a Cytiva Superdex-200 SEC column and degassed by incubating in a vacuum for 20 min. The concentration of the analytes was optimized to reach saturation at least four injections before titration ended. A stirring speed of 750 rpm, temperature 25 ℃, reference power 10 μcal/s, high feedback, and an initial delay of 60 s was used for all experiments. The first priming injection was 0.4 μL, and the rest were 2 μL with 150 s intervals between injections. All calorimetric measurements were performed in triplicate. The data were analyzed using MicroCal PEAQ-ITC analysis software (Version 1.1.0.1262).
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9

ITC and BLI Characterization of Peptide-Protein Interactions

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ITC binding experiments were performed on a Microcal PEAQ-ITC instrument with a 19-injection setting. The running parameters were set to: temperature at 25°C, reference power at 5 μcal/s, stir speed at 0.75 rcf/s and the duration/spacing time of 4/150 s. The synthesized peptides were lyophilized and dissolved in the same buffer as MBP-tagged BP1 proteins with 100 mM NaCl, 20 mM HEPES, pH 7.5 and 3 mM β-mercaptoethanol. All the raw ITC data were processed using the Origin 7.0 program.
BLI experiments were carried out using a FortéBio Octet RED 96 system (Pall-fortébio Corporation). The biotinylated histone peptides were loaded onto streptavidin sensors (SA, #18–5019, Pall-fortébio Corporation) in 250 μl of SD buffer (0.1% BSA, 0.05% Tween 20, 10 mM PBS, pH 7.4) for equilibrium for 300 s. The associations of peptide with BP1-6 × His were tested by soaking the peptide-loaded sensors in the wells containing BP1-6 × His at different concentrations for 100 s. The dissociations of peptide from protein were tested by depriving sensors from the wells for 150 s. When the process of association and dissociation for one concentration were finished, 300 s of equilibration was performed to prepare for the next concentration. Finally, the results were calculated by FortéBio data analysis 10.0 software.
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10

Isothermal Titration Calorimetry Binding Assay

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ITC binding experiments were performed as previously described (30 (link), 41 (link)). Briefly, experiments were carried out on a MicroCal PEAQ ITC instrument (Malvern) at 15 °C while the sample was being stirred at 750 rpm. Buffers of protein and peptides were matched to 50 mM Hepes (pH 7.5), 200 mM NaCl, and 5% glycerol. Each titration comprised one initial injection of 0.4 μl lasting 0.8 s, followed by 18 injections of 2 μl lasting 4 s each at 2.5 min intervals. The initial injection was discarded during data analysis. The microsyringe (40 μl) was loaded with a peptide sample solution at a concentration of 1.5 to 1.8 mM. It was injected into the cell (200 μl), occupied by a protein concentration of 80 to 100 μM. All of the data were fitted to a single-binding site model using the MicroCal PEAQ ITC analysis software to calculate the stoichiometry (N), binding constant (KD), enthalpy (ΔH), and entropy (ΔS) of the interaction. The final titration figures were prepared using OriginPro 2020 (OriginLab).
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